Published online Jul 16, 2023. doi: 10.12998/wjcc.v11.i20.4800
Peer-review started: March 22, 2023
First decision: April 11, 2023
Revised: April 23, 2023
Accepted: May 19, 2023
Article in press: May 19, 2023
Published online: July 16, 2023
Processing time: 101 Days and 18.3 Hours
the interactions between solitary metabolic features and the surrounding complex tumor environment characterize cancer. fatty acids are the essential components of diverse types of lipids, which are crucial mediators in energy metabolism and signal transduction. Although various molecules have been identified in gastric cancer (GC) metastasis, uncovering novel links between fatty acids and the tumor environment is necessary to comprehensively understand gastric cancer.
we constructed a novel prognostic risk model for GC based on fatty acid metastasis (FAM) -related genes. We examined the mechanisms underlying FAM in GC, the relationship between the risk of GC and tumor microenvironment characteristics, and treatment strategies for GC.
we want to construct novel links between fatty acids and the tumor environment to contribute to accurate diagnosis, prognosis prediction, and recurrence risk and metastasis assessments in patients with GC.
Data download and analysis; Detection of differentially expressed genes and functional enrichment analysis between normal and cancer samples; Establishment and validation of prognostic risk model; Principal component analysis and gene set variation analysis; Construction of protein-protein interaction network
Functional analysis of FAM-related genes between normal and cancer samples from TCGA database; Construction and validation of the prognostic risk model in GC; Correlation between risk model score and clinical features; Establishment of predictive nomogram in patients with GC; A FAM-related model predicting response to chemotherapy and GSVA in high- and low-risk groups; Immune differences between high- and low-risk groups; Functional enrichment analysis of FAM-related DEGs in the low- and high-risk score groups based on protein-protein interaction.
A fatty acid risk score model to assess the intact fatty acid features in GC was constructed. This risk model combined with clinicopathological characteristics, prognosis, chemotherapy sensitivity, and immune cell function.
We established a prognostic risk model using data collected from The Cancer Genome Atlas database, explored the function of the risk model, and identified the relationship between the risk model and clinical features.