Topic Highlight
Copyright ©2014 Baishideng Publishing Group Co., Limited. All rights reserved.
World J Gastroenterol. Feb 14, 2014; 20(6): 1529-1536
Published online Feb 14, 2014. doi: 10.3748/wjg.v20.i6.1529
Clinical proteomics identifies potential biomarkers in Helicobacter pylori for gastrointestinal diseases
Chun-Hao Huang, Shyh-Horng Chiou
Chun-Hao Huang, Shyh-Horng Chiou, Quantitative Proteomics Center and Graduate Institute of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan
Chun-Hao Huang, Shyh-Horng Chiou, Institute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan
Author contributions: Huang CH and Chiou SH wrote the paper.
Supported by (in part) Kaohsiung Medical University, Academia Sinica, and the National Science Council, Taipei, Taiwan, No. 96-2311-B-037-005-MY3, No.99-2314-B-037-042, and No. 99-2745-B-037-005 to Chiou SH
Correspondence to: Shyh-Horng Chiou, PhD, Special Chair Professor, Quantitative Proteomics Center and Graduate Institute of Medicine, Kaohsiung Medical University, No.100 Shih-Chuan 1st Road, Kaohsiung 807, Taiwan. shchiou@kmu.edu.tw
Telephone: +886-7-3220377 Fax: +886-7-3133434
Received: September 30, 2013
Revised: November 13, 2013
Accepted: January 6, 2014
Published online: February 14, 2014
Processing time: 141 Days and 8.4 Hours
Abstract

The development of gastrointestinal diseases has been found to be associated with Helicobacter pylori (H. pylori) infection and various biochemical stresses in stomach and intestine. These stresses, such as oxidative, osmotic and acid stresses, may bring about bi-directional effects on both hosts and H. pylori, leading to changes of protein expression in their proteomes. Therefore, proteins differentially expressed in H. pylori under various stresses not only reflect gastrointestinal environment but also provide useful biomarkers for disease diagnosis and prognosis. In this regard, proteomic technology is an ideal tool to identify potential biomarkers as it can systematically monitor proteins and protein variation on a large scale of cell’s translational landscape, permitting in-depth analyses of host and pathogen interactions. By performing two-dimensional polyacrylamide gel electrophoresis (2-DE) followed by liquid chromatography-nanoESI-mass spectrometry (nanoLC-MS/MS), we have successfully pinpointed alkylhydroperoxide reductase (AhpC), neutrophil-activating protein and non-heme iron-binding ferritin as three prospective biomarkers showing up-regulation in H. pylori under oxidative, osmotic and acid stresses, respectively. Further biochemical characterization reveals that various environmental stresses can induce protein structure change and functional conversion in the identified biomarkers. Especially salient is the antioxidant enzyme AhpC, an abundant antioxidant protein present in H. pylori. It switches from a peroxide reductase of low-molecular-weight (LMW) oligomers to a molecular chaperone of high-molecular-weight (HMW) complexes under oxidative stress. Different seropositivy responses against LMW or HMW AhpC in H. pylori-infected patients faithfully match the disease progression from disease-free healthy persons to patients with gastric ulcer and cancer. These results has established AhpC of H. pylori as a promising diagnostic marker for gastrointestinal maladies, and highlight the utility of clinical proteomics for identifying disease biomarkers that can be uniquely applied to disease-oriented translational medicine.

Keywords: Proteomics; Biomarker; Helicobacter pylori; Gastritis; Gastric ulcer; Gastric cancer; Alkylhydroperoxide reductase; Neutrophil-activating protein; Non-heme iron-binding ferritin

Core tip: This work aims to review the literature on the application of proteomics methodology for identifying proteins differentially expressed in Helicobacter pylori (H. pylori) under different environmental stresses, resulting in the identification of several biomarkers related to gastrointestinal disorders induced by H. pylori infection.