Clinical and Translational Research
Copyright ©The Author(s) 2022.
World J Clin Cases. May 6, 2022; 10(13): 3989-4019
Published online May 6, 2022. doi: 10.12998/wjcc.v10.i13.3989
Table 1 Clinical information description of hepatocellular carcinoma patients in The Cancer Genome Atlas
Description
Samples, n = 371
Percentage
Sex
Male24967.11
Female12132.61
Others10.27
Race
White18449.60
Asian15842.59
Black or African American164.31
Others133.50
Vital status
Alive24064.69
Dead13035.14
Others10.27
Age at diagnosis
≥ 60-years-old19753.10
< 60-years-old16945.55
Others51.35
AJCC pathologic T
T118048.52
T29224.80
T2a10.27
T2b10.27
T34512.13
T3a297.82
T3b61.62
T4133.50
TX10.27
Others10.27
AJCC system for tumor staging
N023964.42
N141.08
Nx9124.53
Others20.54
AJCC system for metastasis staging
M026571.43
M141.08
Mx10127.22
Others10.27
AJCC system for stage
Stage I17045.82
Stage II8623.18
Stage III30.81
Stage IIIA6517.52
Stage IIIB82.16
Stage IIIC92.43
Stage IV20.54
Stage IVA10.27
Stage IVB20.54
Others256.74
Prior malignancy
Yes359.43
No33590.30
Others10.27
Treatment or therapy
Yes3810.24
No30983.28
Others246.47
Table 2 Correlation of solute carrier family 2 member 1 and solute carrier family 2 expression and clinical prognosis in hepatocellular carcinoma with different clinicopathological factors in Kaplan-Meier plotter
Clinicopathological characteristicsSolute carrier family 2 member 1
Solute carrier family 2 member 2
Overall survival
Relapse-free survival
Overall survival
Relapse-free survival
n
Hazard ratio
P value
n
Hazard ratio
P value
n
Hazard ratio
P value
n
Hazard ratio
P value
Sex
Male2462.71 (1.73-4.24)5.40E-062101.36 (0.89-2.08)0.1492460.3 (0.0.19-0.48)5.80E-082100.5 (0.34-0.75)0.00068
Female1181.89 (1.06-3.38)0.02871061.61 (0.89-2.9)0.11091181.48 (0.75-2.93)0.261060.47 (0.26-0.85)0.0108
Race
Asian1553.14 (1.71-5.77)1.00E-041431.54 (0.93-2.56)0.0921550.2 (0.11-0.38)3.80E-081430.41 (0.23-0.73)0.0017
White1811.98 (1.24-3.16)0.00341471.41 (0.88-2.27)0.15271810.61 (0.35-1.05)0.0721470.53 (0.33-0.84)0.0065
Black or African American17NANA13NANA17NANA13NANA
Sorafenib treatment
Yes292.19 (0.61-7.89)0.219221.43 (0.59-3.47)0.4312290.23 (0.06-0.88)0.0205220.61 (0.24-1.53)0.2867
NoneNANANANANANANANANANANANA
Risk factors
Alcohol consumption
Yes1151.94 (1-3.78)0.0464991.61 (0.86-3.03)0.13651150.42 (0.22-0.8)0.0063990.37 (0.2-0.67)0.00061
None2022.34 (1.46-3.73)0.000251831.42 (0.9-2.23)0.12842020.41 (0.26-0.65)9.70E-051830.57 (0.34-0.96)0.0337
Hepatitis virus
Yes1502.99 (1.5-5.95)0.00111391.45 (0.87-2.39)0.1491500.32 (0.16-0.62)0.00041390.63 (0.37-1.05)0.0749
None1672.39 (1.45-3.96)0.000461431.92 (1.12-3.32)0.01681670.47 (0.27-0.83)0.00831430.41 (0.25-0.68)0.00038
Pathology
Stage
11702.49 (1.33-4.64)0.00311531.67 (0.97-2.89)0.06171700.42 (0.22-0.77)0.00441530.41 (0.22-0.76)0.0035
1+22532.09 (1.27-3.44)0.0032281.22 (0.8-1.86)0.352530.54 (0.33-0.87)0.01072280.4 (0.23-0.7)0.00091
2832.12 (0.79-5.64)0.1258750.5 (0.25-0.99)0.0424830.34 (0.1-1.14)0.0665750.56 (0.27-1.14)0.1046
2+31662.27 (1.39-3.7)0.000721451.44 (0.89-2.35)0.13891660.47 (0.26-0.83)0.00771450.65 (0.41-1.03)0.064
3832.78 (1.52-5.06)0.00052702.29 (1.21-4.3)0.0086830.31 (0.16-0.57)0.00011700.54 (0.29-0.99)0.0428
3+4872.67 (1.49-4.78)6.00E-01702.29 (1.21-4.3)0.0086870.34 (0.19-0.62)0.0003700.54 (0.29-0.99)0.0428
45NANA0NANA4NANA0NANA
Grade
1550.67 (0.26-1.7)0.3967453.65 (0.83-16.1)0.067550.42 (0.14-1.27)0.1114450.45 (0.17-1.17)0.0919
21742.16 (1.29-3.61)0.00251491.49 (0.89-2.5)0.12461740.48 (0.28-0.81)0.00511490.48 (0.29-0.78)0.0029
31183.11 (1.69-5.7)0.000121072.16 (1.2-3.86)0.00821180.3 (0.14-0.66)0.00141070.62 (0.34-1,.14)0.1221
412NANA11NANA12NANA11NANA
American Joint Committee on Cancer system for tumor staging
11802.31 (1.27-4.21)0.00471601.51 (0.89-2.580.12451800.39 (0.22-0.71)0.00141600.41 (0.22-0.75)0.0027
2902.07 (0.79-5.44)0.1303800.48 (0.25-0.92)0.023900.45 (0.16-1.29)0.1272802.02 (0.9-4.56)0.0836
3783.04 (1.64-5.64)0.00022672.23 (1.11-4.48)0.0209780.29 (0.15-0.57)0.00011670.43 (0.22-0.83)0.01
413NANA6NANA13NANA6NANA
Vascular invasion
None2032.18 (91.26-3.78)0.00431751.32 (0.77-2.28)0.31442030.39 (0.23-0.66)0.000271750.45 (0.25-0.83)0.0089
Micro902.16 (1.01-4.62)0.042820.46 (0.24-0.88)0.0163900.32 (0.1-1.08)0.0531820.73 (0.37-1.44)0.3593
Macro16NANA14NANA16NANA14NANA
Table 3 Correlation analysis between solute carrier family 2 member 1 and solute carrier family 2 and genes markers of immune cells in tumor immune estimation resource
DescriptionGene markersSolute carrier family 2 member 1
Solute carrier family 2 member 2
None
Purity
None
Purity
cor
P value
cor
P value
cor
P value
cor
P value
CD8+ T cell
CD8A0.2162.88E-050.1731.27E-03-0.1034.85E-02-0.0276.15E-01
CD8B0.2298.60E-060.1952.72E-04-0.1991.14E-04-0.1381.04E-02
T cell (general)
CD3D0.2412.75E-060.223.73E-05-0.3271.33E-10-0.2761.88E-07
CD3E0.2011.01E-040.1622.59E-03-0.1651.44E-03-0.0871.08E-01
CD20.1785.64E-040.1381.04E-02-0.1941.75E-04-0.1212.48E-02
B cell
CD190.2085.50E-050.1761.04E-03-0.1378.06E-03-0.0899.95E-02
CD79A0.0995.72E-020.0454.01E-01-0.1387.84-03-0.071.92E-01
Monocyte
CD860.4130.00E+000.4158.08E-16-0.1961.50E-04-0.155.21E-03
CD115 (CSF1R)0.410.00E+000.4083.06E-15-0.1757.02E-04-0.1261.96E-02
Tumor-associated macrophage
CCL20.2066.86E-050.1622.53E-03-0.1172.47E-02-0.0424.32E-01
CD680.384.24E-140.3812.40E-13-0.2355.28E-06-0.1923.26E-04
IL100.3261.26E-100.3094.43E-09-0.1311.15E-02-0.0781.48E-01
M1 macrophage
INOS (NOS2)0.0681.91E-010.0523.39E-010.1757.12E-040.187.95E-04
IRF50.1426.33E-030.1381.05E-020.0118.39E-010.0039.63E-01
COX2 (PTGS2)0.322.91E-100.3132.80E-09-0.062.45E-01-0.0079.03E-01
M2 macrophage
CD1630.283.94E-080.2531.91E-060.0463.72E-010.1252.00E-02
VSIG40.3533.65E-120.3361.56E-10-0.062.46E-01-0.0078.96E-01
MS4A4A0.3373.49E-110.333.15E-10-0.0572.69E-010.019.85E-01
CD66b (CEACAM8)0.0869.68E-020.0841.20E-01-0.0364.89E-01-0.0276.12E-01
CD11b (ITGAM)0.4280.00E+000.4054.71E-15-0.185.06E-04-0.1563.75E-03
CCR70.0888.89E-020.0167.70E-01-0.0325.35E-01-0.0454.00E-01
KIR2DL10.0831.09E-010.0632.46E-01-0.0039.51E-010.0197.23E-01
KIR2DL30.1795.16E-040.1671.82E-03-0.0069.15E-01-0.0384.79E-01
KIR2DL40.2345.38E-060.2127.12E-05-0.1331.06E-02-0.1074.78E-02
KIR3DL10.1464.97E-030.122.64E-020.0791.30E-010.1163.15E-02
KIR3DL20.0986.04E-020.081.38E-01-0.0276.02E-010.0039.60E-01
KIR3DL30.062.53E-010.0463.91E-01-0.0216.91E-01-0.0157.87E-01
KIR2DS40.1172.39E-020.131.57E-020.044.37E-010.0523.37E-01
HLA-DPB10.3194.21E-100.2962.07E-08-0.1912.25E-04-0.1381.03E-02
HLA-DQB10.2211.77E-050.1923.35E-04-0.2192.09E-05-0.1711.43E-03
HLA-DRA0.355.25E-120.3265.24E-10-0.1172.37E-02-0.0553.09E-01
HLA-DPA10.3383.01E-110.3161.92E-09-0.1142.88E-02-0.0523.34E-01
BDCA-1 (CD1C)0.0612.45E-010.0246.52E-010.0049.40E-010.0731.77E-01
BDCA-4 (NRP1)0.3571.99E-120.3521.70E-110.0434.13E-010.0871.08E-01
CD11c (ITGAX)0.3822.93E-140.382.50E-13-0.1542.93E-03-0.1182.86E-02
Th1
T-bet (TBX21)0.0956.88E-020.0424.32E-010.0256.38E-010.1163.07E-02
STAT40.0821.13E-010.0454.04E-01-0.1064.22E-02-0.0582.84E-01
STAT10.3147.29E-100.294.18E-080.0236.52E-010.0582.84E-01
IFN-γ (IFNG)0.2373.81E-060.2127.39E-05-0.1691.09E-03-0.1222.31E-02
TNF-α (TNF)0.2776.15E-080.2571.34E-06-0.1474.67E-03-0.0928.91E-02
Th2
GATA30.2481.34E-060.2351.03E-05-0.1766.76E-04-0.1084.52E-02
STAT60.271.35E-070.2551.63E-060.1785.68E-040.193.82E-04
STAT5A0.371.83E-130.3381.18E-10-0.0976.27E-02-0.0553.12E-01
IL13-0.0811.19E-01-0.1133.56E-020.0771.38E-010.099.40E-02
Tfh
BCL60.2672.04E-070.2811.16E-070.2271.08E-050.2281.94E-05
IL210.1241.65E-020.131.55E-02-0.0652.15E-01-0.062.68E-01
Th17
IL17A-0.0473.68E-01-0.0335.46E-010.044.47E-01-0.0513.41E-01
T cell regulatory
FOXP30.0681.89E-01-0.0394.68E-010.1691.07E-030.1894.24E-04
CCR80.2861.95E-080.2646.44E-07-0.0562.79E-01-0.0088.86E-01
STAT5B0.1562.63E-030.1731.29E-030.4020.00E+000.3971.83E-14
TGFβ (TGFB1)0.3147.92E-100.3038.83E-09-0.2814.30E-08-0.2425.53E-06
T cell exhaustion
PD-1 (PDCD1)0.2565.91E-070.2321.31E-05-0.2813.50E-08-0.2387.71E-06
CTLA40.2842.57E-080.2665.31E-07-0.3271.15E-10-0.2838.93E-08
LAG30.1562.67E-020.1271.83E-02-0.1951.66E-04-0.1652.15E-03
TIM-3 (HAVCR2)0.4340.00E+000.4371.52E-17-0.2556.91E-07-0.2281.89E-05
GZMB0.1766.91E-040.1311.51E-02-0.1241.70E-02-0.0682.10E-01
Table 4 Correlation analysis between solute carrier family 2 member 1 and solute carrier family 2 and genes markers of immune cells in gene expression profiling interactive analysis
DescriptionGene markersSolute carrier family 2 member 1
Solute carrier family 2 member 2
cor
P value
cor
P value
CD8+ T cell
CD8A0.243.10E-06-0.0841.10E-01
CD8B0.263.20E-07-0.131.40E-02
T cell (general)
CD3D0.185.10E-04-0.231.10E-05
CD3E0.154.00E-03-0.113.90E-02
CD20.171.50E-03-0.122.60E-02
B cell
CD190.221.60E-05-0.0731.60E-01
CD79A0.0364.90E-01-0.592.60E-01
Monocyte
CD860.391.50E-14-0.161.70E-03
CD115 (CSF1R)0.361.40E-12-0.145.40E-03
Tumor-associated macrophage
CCL20.162.30E-03-0.131.50E-02
CD680.279.20E-08-0.146.50E-03
IL100.322.50E-10-0.0956.70E-02
M1 macrophage
INOS (NOS2)-0.0315.50E-010.21.20E-04
IRF50.147.40E-030.0444.00E-01
COX2 (PTGS2)0.161.50E-03-0.0285.90E-01
M2 macrophage
CD1630.317.00E-10-0.131.40E-02
VSIG40.361.10E-12-0.121.80E-02
MS4A4A0.291.50E-08-0.112.80E-02
CD66b (CEACAM8)0.0741.60E-01-0.0187.30E-01
Neutrophil
CD11b (ITGAM)0.285.80E-08-0.0741.60E-01
CCR70.0394.60E-01-0.0285.90E-01
Natural killer cell
KIR2DL10.0879.40E-02-0.0592.60E-01
KIR2DL30.131.40E-02-0.053.40E-01
KIR2DL40.187.10E-04-0.122.00E-02
KIR3DL10.0869.70E-02-0.0582.70E-01
KIR3DL20.0691.90E-01-0.00818.80E-01
KIR3DL30.081.30E-01-0.0681.90E-01
KIR2DS40.0444.00E-010.027.10E-01
Dendritic cell
HLA-DPB10.251.40E-06-0.162.20E-03
HLA-DQB10.148.10E-03-0.192.60E-04
HLA-DRA0.266.00E-07-0.155.00E-03
HLA-DPA10.28.00E-05-0.122.30E-02
BDCA-1 (CD1C)0.122.40E-02-0.0444.00E-01
BDCA-4 (NRP1)0.236.80E-06-0.0374.80E-01
CD11c (ITGAX)0.242.00E-06-0.131.40E-02
Th1
T-bet (TBX21)0.0889.00E-02-0.0582.70E-01
STAT40.00279.60E-01-0.0414.40E-01
STAT10.131.10E-020.0177.50E-01
IFN-γ (IFNG)0.193.30E-04-0.14.70E-02
TNF-α (TNF)0.122.00E-02-0.15.40E-02
Th2
GATA30.312.10E-09-0.131.20E-02
STAT60.154.80E-030.192.40E-04
STAT5A0.28.20E-05-0.071.80E-01
IL13-0.0256.30E-01-0.018.40E-01
Tfh
BCL60.14.70E-020.242.70E-06
IL210.0721.70E-01-0.0443.90E-01
Th17
IL17A-0.0226.70E-010.0711.80E-01
T cell regulatory
FOXP3-0.0364.90E-010.171.40E-03
CCR80.161.90E-03-0.0821.20E-01
STAT5B0.0731.60E-010.430.00E+00
TGFβ (TGFB1)0.242.10E-06-0.251.40E-06
T cell exhaustion
PD-1 (PDCD1)0.081.20E-01-0.122.00E-02
CTLA40.171.10E-03-0.187.20E-04
LAG30.237.60E-06-0.193.30E-04
TIM-3 (HAVCR2)0.221.30E-05-0.171.30E-03
GZMB0.178.10E-04-0.162.20E-03