Editorial
Copyright ©2011 Baishideng Publishing Group Co.
World J Gastrointest Oncol. Jun 15, 2011; 3(6): 79-98
Published online Jun 15, 2011. doi: 10.4251/wjgo.v3.i6.79
Table 1 Effects of matrix metalloproteinases single nucleotide polymorphisms on promoter activity
MMPSNPEffect of mutationInfluence on promoter activity in vitroReference
MMP-1-1607 1G/2GExtra Guanine (2G) creates a binding site for transcription factor Ets-1Increased in 2G allele (4-fold)Rutter et al[18]
MMP-2-1306 C/TC to T substitution disrupts Sp-1 binding siteDecreased in T-allelePrice et al[22]
MMP-2-735 C/TC to T substitution influences Sp-1 binding siteDecreased in T-alleleYu et al[15]
MMP-2-790 T/GThree transcription factors1 bind to T (but not G) allele sequenceDecreased in G allele2Vasku et al[28]
MMP-2-955 A/CUnknownEffect unclearPrice et al[22]
MMP-2-1575 G/AG to T substitution decreases estrogen receptor α bindingDecreased in A alleleHarendza et al[27]
MMP-3-1171 5A/6A3Transcription suppressor binds with higher affinity to 6A alleleDecreased in 6A allele (2-fold)Ye et al[19]
MMP-3Lys45GluLys to Glu substitution in exon 2 of geneEffect unclearOuyang et al[16]
MMP-7-181 A/GNuclear proteins bind with higher affinity to G alleleIncreased in G allele4 (2- to 3- fold)Jormsjö et al[17]
MMP-7-153 C/TT allele binds additional nuclear proteins compared with C alleleIncreased in T allele4 (2- to 3- fold)Jormsjö et al[17]
affinity for proteins that bind to both alleles higher in C allele
MMP-8-799 C/TInfluences binding of transcription factor?Increased in T allele5Wang et al[23]
MMP-817 C/GInfluences binding of transcription factor?Increased in G allele5Wang et al[23]
MMP-9-90 CA(n)Number of repeats influences strength of nuclear bindingIncreased in n = 21 vs n = 14, n = 18Shimajiri et al[12]
MMP-9-1562 C/TC to T substitution disrupts nuclear protein binding siteIncreased in T alleleZhang et al[20]
MMP-9R279QArg to Gln substitution in fibronectin type II domainsEffect unclear6Wu et al[13]
MMP-9P574RPro to Arg substitution in hemopexin domainEffect unclear6Wu et al[13]
MMP-9R668QArg to Gln substitution in hemopexin domainEffect unclear6Wu et al[13]
MMP-12-82 A/GA to G substitution results in decreased affinity for transcription factor AP-1Decreased in G alleleJormsjö et al[21]
MMP-121082 A/GAsn to Ser substitution at coding region of hemopexin domainEffect unclearJoos et al[25]
MMP-13-77 A/GA to G substitution results in decreased affinity for transcription factor AP-1Decreased in G allele (2-fold)Yoon et al[24]
MMP-21C572TAla to Val substitution in enzymes catalytic domainEffect unclearShagisultanova et al[29]
TIMP-1372 C/TUnknown, located in exon 5, no effect on transcription or amino-acid sequenceEffect unclearHinterseher et al[26]
TIMP-2-418 G/CG to C substitution results in disruption of Sp-1 binding siteDecreased in C allele2Hirano et al[30]
TIMP-2303C/TUnknown, located in exon 3, no effect on transcription or amino-acid sequenceEffect unclearKubben et al[14]
Table 2 Polymorphisms of tissue inhibitor of matrix metalloproteinases in esophageal cancer
GeneSNPReferenceCancer typeEthnicityCase/controlOutcome parameterResultsParameter OROR95% CIP value
MMP-1-1607 1G/2GBradbury[33]EACaucasian313/455Cancer riskIncreased cancer risk in 1G/2G and 2G/2G2G/2G vs 1G/1G1.831.2-2.80.005
Overall survivalNo difference in overall survival
Fruh[32]EACaucasian101/101Cancer riskNo difference in cancer risk
Jin[42]ESCCChinese234/350Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
MMP-2-735 C/TLi[39]ESCCChinese335/624Cancer riskNo difference in cancer risk
Yu[15]ESCCChinese527/777Cancer riskIncreased cancer risk in CC (trend)CC vs CT+TT1.301.04-1.630.056
Sun[31]ESCCChinese335/624Cancer riskNo difference in cancer risk
Chen[40]ESCCMongolian188/324Cancer riskIncreased cancer risk in TTTT vs CC4.821.59-14.60
MMP-2-1306 C/TFruh[32]EACaucasian101/101Cancer riskNo difference in cancer risk
Cancer risk and HPHP infection protects against EA in CCCC vs CT+TT0.290.1-0.7
Chen[40]ESCCMongolian188/324Cancer riskNo difference in cancer risk
Li[39]ESCCChinese335/624Cancer riskIncreased cancer risk in CCCC vs CT+TT1.571.10-2.230.010
Yu[15]ESCCChinese527/777Cancer riskIncreased cancer risk in CCCC vs CT+TT1.521.17-1.960.001
Sun[31]ESCCChinese335/624Cancer riskIncreased cancer risk in CCCC vs CT+TT1.571.10-2.23
MMP-3-1171 6A/5ABradbury[33]EACaucasian313/455Cancer riskIncreased cancer risk in 6A/5A and 5A/5A5A/5A vs 6A/6A1.611.0-2.50.030
Overall survivalNo difference in overall survival
Fruh[32]EACaucasian101/101Cancer riskNo difference in cancer risk
Cancer risk and HPHP infection protects against EA in 6A/6A6A/6A vs 5A/5A + 5A/6A0.040.002-0.90.040
Zhang[44]ESCCChinese234/350Cancer riskNo difference in cancer risk
Cancer in smokerIncreased cancer risk in 5A allele in smokers5A/5A + 5A/6A vs 6A/6A1.951.08-3.53
LN metastasesIncreased risk of LN metastases in 5A allele5A/5A vs 6A/6A2.241.07-4.690.030
Infiltration depthNo difference in infiltration depth
MMP-3Lys45GluOuyang [16]ESCCChinese227/378Cancer riskNo difference in cancer risk
MMP-7-181 A/GZhang et al[45]ESCCChinese258/350Cancer riskIncreased cancer risk in AG and GGAG+GG vs AA1.831.12-2.99
LN metastasesNo difference in LN metastases
MMP-9R279QWu [13]ESCCChinese132/132Cancer riskNo difference in cancer risk
MMP-9P574RWu et al[13]ESCCChinese132/132Cancer riskIncreased cancer risk in RRRR vs PP4.081.58-10.520.000
MMP-9R668QWu et al[13]ESCCChinese132/132Cancer riskNo difference in cancer risk
MMP-9-1562 C/TXia et al[43]ESCCChineseCancer riskNo difference in cancer risk
MMP-12-82 A/GBradbury et al[33]EACaucasian313/455Cancer riskNo difference in cancer risk
Overall survivalNo difference in overall survival
Fruh et al[32]EACaucasian101/101Cancer riskNo difference in cancer risk
Cancer risk and HPHP infection protects against EA in AAAA vs AG/GG0.440.2-0.80.020
MMP-121082 A/GBradbury et al[33]EACaucasian313/455Cancer riskNo difference in cancer risk
Overall survivalNo difference in overall survival
MMP-12-82 A/GLi et al[39]ESCCChinese335/624Cancer riskNo difference in cancer risk
Cancer riskNo difference in cancer risk
MMP-13-77 A/GZhang et al[41]ESCCChinese316/609Cancer riskNo difference in cancer risk
Table 3 Polymorphisms of matrix metalloproteinases in hepatocellular carcinoma
GeneSNPReferenceCancer typeEthnicityCase/controlOutcome parameterResultsParameter OROR95% CIP value
MMP-1-1607 1G/2GMatsumura[65]GastricJapanese215/166Cancer riskNo difference in cancer risk
Clinicopathol. par.No correlation with any clinicopath. par.
Jin[42]GCAChinese183/350Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
MMP-2-1306 C/TZhang[53]GastricChinese228/774Cancer riskIncreased cancer risk in CCCC vs CT/TT1.671.17-2.38
Wu[55]GastricTaiwanese240/283Cancer riskNo difference in cancer risk
LN metastasesIncreased risk of lymphatic invasion in CCCC vs CT+TT2.771.27-6.040.01
Venous invasionIncreased risk of venous invasion in CCCC vs CT+TT2.931.27-6.780.012
SurvivalNo difference in survival
Kubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
Alakus[56]GastricCaucasian135/58Cancer riskNo difference in cancer risk
MMP-2 protein expressionNo correlation with protein expression
Overall survivalNo difference in overall survival
Li[39]GCAChinese257/624Cancer riskNo difference in cancer risk
Miao[54]GCAChinese356/789Cancer riskIncreased cancer risk in CCCC vs CT+TT3.362.34-4.97
Distant metastasesNo difference in metastases
MMP-2-735 C/TLi[39]GCAChinese257/624Cancer riskTrend towards increased cancer risk in CCCC vs CT+TT1.360.99-1.870.06
Cancer risk in non-smokerIncreased cancer risk in CC in non-smokerCC vs CT+TT1.71.07-2.680.02
MMP-3-1171 6A/5AZhang[44]GCAChinese183/350Cancer riskNo difference in cancer risk
Cancer risk in smokerNo difference in cancer risk in smoker
LN metastasesNo difference in LN metastases
Infiltration depthNo difference in infiltration depth
MMP-8-799 C/TKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
MMP-7-181 A/GSugimoto[63]GastricJapanese160/434Cancer riskIncreased cancer risk in G-allele carriersAG+GG vs AA2.321.24-4.350.009
Cancer stageIncreased cancer stage in G allele carriersAG+GG vs AA3.661.54-8.730.003
Kubben[14]GastricCaucasian79/169Cancer riskMore AA and less AG in cancer groupAG+GG vs AA0.500.28-0.87< 0.04
Tumor-related survivalNo difference in tumor-related survival
Li[64]GastricChinese338/380Cancer riskIncreased cancer risk in G allele carriersAG+GG vs AA1.951.24-3.050.004
LN metastasesIncreased risk of LN metastases in G alleleAG+GG vs AA0.040
Cancer stageMore advanced cancer stage in G alleleAG+GG vs AA0.007
Alakus[56]GastricCaucasian135/58Cancer riskNo difference in cancer riskAG+GG vs AA1.060.69-1.640.79
Overall survivalNo difference in overall survival
Zhang[45]GCAChinese201/350Cancer riskIncreased cancer risk in G allele carriersAG+GG vs AA1.961.17-3.29
LN metastasesNo difference in LN metastases
MMP-7-153 C/TKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
MMP-817 C/GKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
MMP-9R279QTang[59]GastricChinese74/100Cancer riskNo difference in cancer risk
LN metastasesIncreased risk of LN metastases in RRRR vs QQ+RQ5.741.59-13.43
MMP-9P574RTang[59]GastricChinese74/100Cancer riskNo difference in cancer risk
LN metastasesIncreased risk of LN metastases in PPPP vs RR+PR4.171.39-11.78
MMP-9-1562 C/TKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
Matsumura[57]GastricJapanese177/224Cancer riskNo difference in cancer risk
Infiltration depthDeeper submucosal infiltration in T alleleCT+TT vs CC2.611.07-6.340.034
Lymphatic invasionIncreased lymphatic invasion in T alleleCT+TT vs CC2.271.09-4.740.028
TNM classificationMore advanced stage cancer in T alleleCT+TT vs CC2.261.12-4.550.022
Venous invasionNo difference in venous invasionCT+TT vs CC1.980.99-3.970.053
Zhang[53]GastricChinese228/774Cancer riskNo difference in cancer risk
Wu[58]GastricTaiwanese263/354Cancer riskNo difference in cancer risk
MMP-12-82 A/GLi[39]GCAChinese335/624Cancer riskNo difference in cancer risk
Cancer risk in smokerNo difference in cancer risk in smoker
MMP-13-77 A/GLi[39]GCAChinese257/624Cancer riskNo difference in cancer risk
Cancer risk in smokerDecreased cancer risk in AG in smokerAG vs AA/AG0.470.28-0.80.01
Zhang[41]GCAChinese243/609Cancer riskNo difference in cancer risk
Cancer risk in smokerDecreased cancer risk in AG in smoker
TIMP-1372 C/TKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
TIMP-2-418 G/CKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalNo difference in tumor-related survival
Wu[55]GastricTaiwanese240/283Cancer riskNo difference in cancer risk
LN metastasesIncreased risk of LN metastases in GGGG vs CG+GG2.871.22-6.760.16
Venous invasionIncreased venous invasion in GGGG vs CG+GG2.651.08-6.490.033
SurvivalNo difference in survival
Yang[66]GastricChina206/206Cancer riskMore C-alleles in cancer patientsCC+CG vs GG1.511.00-2.260.049
Clinicopathol. par.No correlation with any clinicopath. par.
TIMP-2303 C/TKubben[14]GastricCaucasian79/169Cancer riskNo difference in cancer risk
Tumor-related survivalBetter survival in CC patientsCC vs CT/TT4.451.81-10.90.001
Alakus[56]GastricCaucasian135/58Cancer riskNo difference in cancer risk
LN metastasesMore LN metastases in CC0.01
Distant metastasesIncreased risk of distant metastases in CC0.022
SurvivalNo difference in survival
Table 4 Polymorphisms of matrix metalloproteinases in hepatocellular carcinoma
GeneSNPReferenceEthnicityCase/controlParameterResultsParameter OROR95% CIP value
MMP-1-1607 1G/2GZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
Okamoto[78]Japanese95/83Cancer riskIncreased risk of HCC in 2G/2G0.002
Clinicopath. par.No correlation with any clinicopath. par.
SurvivalNo difference in survival
Okamoto[79]Japanese92/170Cancer riskNo difference in cancer risk
Survival/clinicopath. par.No difference in survival/clinicopath. par.
MMP-2-735 C/TZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
Cancer riskNo difference in cancer risk
MMP-2-1306 C/TZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
Wu[82]Chinese93/0HCC recurrence after LTxMore CC in recurrence groupCT vs CC0.420.18-0.99< 0.05
MMP-3-1171 5A/6AZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
Okamoto[78]Japanese95/83Cancer riskNo difference in cancer risk
HCC diameter at diagnosisLarger diameter in 5A allele carriers
SurvivalDecreased survival in 5A allele carriers
Okamoto[79]Japanese92/170Cancer riskIncreased cancer risk in 5A allele carriers
Survival/clinicopath. par.Decreased survival in 5A allele carriers0.035
MMP-7-181 A/GQiu[81]Chinese434/480Cancer riskNo difference in cancer risk
MMP-8-799 C/TQiu[81]Chinese434/480Cancer riskNo difference in cancer risk
MMP-9-1562 C/TZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
Wu[82]Chinese93/0HCC recurrence after LTxNo difference in HCC recurrence
Okamoto[78]Japanese95/83Cancer riskNo difference in cancer risk
Differentiation gradeDifferentiation worse in T allele carriers0.03
SurvivalNo difference in survival
Okamoto[79]Japanese92/170Cancer riskNo difference in cancer risk
Survival/clinicopath. par.No difference in survival/clinicopath. par.
MMP-12-82 A/GZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
MMP-13-77 A/GZhai[80]Chinese434/480Cancer riskNo difference in cancer risk
MMP-21C572TQiu[81]Chinese434/480Cancer riskNo difference in cancer risk
TIMP-2-418 G/COkamoto[83]Japanese92/70Cancer risk HCCNo difference in cancer risk
SurvivalNo difference in survival
Table 5 Polymorphisms of matrix metalloproteinases in colorectal cancer
GeneSNPReferenceEthnicityCase/controlParameterResultsParameter OROR95% CIP value
MMP-1-1607 1G/2GGhilardi[92]Caucasian60/164Cancer riskIncreased cancer risk in 2G/2G2G/2G vs 1G/1G + 1G/2G2.211.17-4.160.014
Distant metastasesIncreased risk of metastases in 2G/2G2G/2G vs 1G/1G + 1G/2G4.731.46-15.260.008
Zinzindohoue[99]Caucasian201/0SurvivalOverall survival worse in 2G/2G2G/2G vs 1G/1G5.42.0-14.70.001
Hettiaratchi[96]Australian503/471Cancer riskNo difference in cancer risk
SurvivalIncreased survival in 2G/2G2G/2G vs 1G/2G + 1G/1G0.430.19-0.960.040
Clinicopath. par.No correlation with any clinicopath. par.
Woo[89]Korean185/304Cancer riskIncreased cancer risk in 2G/2G and G-allele2G/2G in patients vs controls1.81.23-2.640.044
LN metastasesMore often >10 LN in 2G/2G
Fang[94]Chinese237/252Cancer riskNo difference in cancer risk
Xu[97]Chinese126/126Cancer riskNo difference in cancer risk
Clinicopath. par.No correlation with any clinicopath. par.
Przybylowska[98]Caucasian33/52Cancer riskNo difference in cancer risk
Hinoda[91]Japanese101/127Cancer riskIncreased cancer risk in 2G/2G2G/2G vs 1G/1G + 1G/2G2.081.22-3.530.007
Clinicopath. par.No correlation with any clinicopath. par.
Biondi[93]Caucasian63/164Cancer riskMore 2G allele in cancer patients< 0.08
de Lima[95]Brasilian130/130Cancer riskNo difference in cancer risk
Distant metastasesIncreased risk of metastases in 1G allele (trend)
LN metastasesNo difference in LN metastases
Elander[90]Caucasian127/208Cancer riskIncreased cancer risk in 2G allele carriers2G allele vs 1G allele1.411.02-1.960.037
Clinicopath. par.No correlation with any clinicopath. par.
Kouhkan[88]Iranian150/100Cancer riskIncreased cancer risk in 2G/2G and G-allele
Distant metastasesEarlier metastases in 2G/2G
MMP-2-1306 C/TXu[102]Chinese126/126Cancer riskIncreased cancer risk in CCCC vs CT+TT1.961.06-3.64< 0.05
Infiltration depthMore serosa/adventitia involvement in CCCC vs CT+TT0.042
Hettiaratchi[96]Australian503/471Cancer riskNo difference in cancer risk
SurvivalNo difference in survival
Clinicopath. par.No correlation with any clinicopath. par.
Langers[105]Caucasian215/0Survival10 year survival worse in TTCC/CT vs TT1.41.02-1.910.038
Ohtani[103]Japanese47/67Cancer riskNo difference in cancer risk
Elander[90]Caucasian127/208Cancer riskNo difference in cancer risk
Clinicopath. par.No correlation with any clinicopath. par.
MMP-2-790 T/GXu[104]Chinese126/126Cancer riskNo difference in cancer risk
Infiltration depthNo difference in infiltration depth
MMP-2-955 A/CXu[104]Chinese126/126Cancer riskNo difference in cancer risk
Infiltration depthNo difference in infiltration depth
MMP-2-1575 G/AXu[104]Chinese126/126Cancer riskIncreased cancer risk in GG and G alleleGG vs GA+AA1.961.06-3.640.04
Infiltration depthMore serosa/adventitia infiltration in GGGG vs GA+AA< 0.05
MMP-3-1171 5A/6AHinoda[91]Japanese101/127Cancer riskIncreased cancer risk in 6A/6A6A/6A vs 5A/5A + 5A/6A2.111.17-3.820.01
Clinicopath. par.No correlation with any clinicopath. par.
Biondi[93]Caucasian63/164Cancer riskNo difference in cancer risk
Ghilardi[92]Caucasian60/164Cancer riskNo difference in cancer risk
Distant metastasesNo difference in metastases
Woo[89]Korean185/304Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
Ohtani[103]Japanese47/67Cancer riskNo difference in cancer risk
Elander[90]Caucasian127/208Cancer riskNo difference in cancer risk
Clinicopath var.No correlation with any clinicopath. par.
Zinzindohoue[99]Caucasian201/0SurvivalNo difference in overall survival
Hettiaratchi[96]Australian503/471Cancer riskNo difference in cancer risk
SurvivalNo difference in survival
Clinicopath. par.No correlation with any clinicopath. par.
Xu[97]Chinese126/126Cancer riskNo difference in cancer risk
Clinicopath. par.No correlation with any clinicopath. par.
MMP-7-153 C/TGhilardi[111]Caucasian58/111Cancer riskIncreased cancer risk in T allele carriersT allele in patients vs controls2.20.89-5.480.05
Clinicopath. par.No correlation with any clinicopath. par.
Langers[110]Caucasian174/0SurvivalBetter survival in CC patientsCC vs CT+TT (LR)140.001
MMP-7-181 A/GWoo[89]Korean185/304Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
Fang[94]Chinese237/252Cancer riskNo difference in cancer risk
Ghilardi[111]Caucasian58/111Cancer riskIncreased cancer risk in GGGG in patients vs controls2.410.98-5.890.03
Distant metastasesGG more often distant metastasesG in M+ vs M-7.52.07-27.190.001
LN metastasesGG more frequent LN metastases
Ohtani[103]Japanese47/67Cancer riskNo difference in cancer risk
Langers[110]Caucasian174/0SurvivalNo difference in survival
de Lima[95]Brasilian130/130Cancer riskNo difference in cancer risk
Distant metastasesNo difference in metastases
LN metastasesNo difference in LN metastases
MMP-9R279QWoo[89]Korean185/304Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
Xing[106]Chinese137/199Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
Fang[94]Chinese237/252Cancer incidenceIncreased cancer risk in RRRR vs QQ2.211.25-3.930.006
MMP-9-90(CA)nWoo[89]Korean185/304Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases
MMP-9-1562 C/TXu[107]Chinese126/126Cancer riskNo difference in cancer risk
Infiltration depthNo difference in infiltration depth
Woo[89]Korean185/304Cancer riskIncreased cancer risk in CC patientsGG in patients vs controls1.71.04-2.660.03
LN metastasesNo difference in LN metastases
Xing[106]Chinese137/199Cancer riskNo difference in cancer risk
LN metastasesIncreased risk of LN metastases in CT+TTCT+TT vs CC0.02
Langers[105]Caucasian215/0SurvivalNo difference in survival
Ohtani[103]Japanese47/67Cancer riskNo difference in cancer risk
Elander[90]Caucasian127/208Cancer riskNo difference in cancer risk
Clinicopath. par.No relationschip with clinicopath. par.
MMP-12-82A/GWoo[89]Korean185/304Cancer riskNo difference in cancer risk
LN metastasesNo difference in LN metastases