Simon I, Schaefer M, Reichert J, Stremmel W. Analysis of the human Atox 1 homologue in Wilson patients. World J Gastroenterol 2008; 14(15): 2383-2387 [PMID: 18416466 DOI: 10.3748/wjg.14.2383]
Corresponding Author of This Article
Mark Schaefer, MD, Department of Gastroenterology, University of Heidelberg, INF 410, D-69120 Heidelberg, Germany. kontakt@dr-schaefer-praxis.de
Article-Type of This Article
Rapid Communication
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World J Gastroenterol. Apr 21, 2008; 14(15): 2383-2387 Published online Apr 21, 2008. doi: 10.3748/wjg.14.2383
Table 1 Oligonucleotide primers used to amplify Atox1
Exon
Sequence
Fragment size
Exon 1-Forward primer
5’-GGAGTGGGAGGGGCCTCCGGGACC-3’
273 bp
Exon 1-Reverse primer
5’-GTAAGCTAGGGGACAACAGCGGCTC-3’
273 bp
Exon 2 - Forward primer
5’-GCACTGTGTGGGGGTCACTCTACAG-3’
320 bp
Exon 2-Reverse primer
5’-GTGAGGATTAAATGATGTGATTCAC-3’
320 bp
Exon 3-Forward primer
5’-GAACTCTTTCTTGCTGTAACTGGGAG-3’
344 bp
Exon 3-Reverse primer
5’-GAGGGCTCTCCCGCTCCACTCAAG-3’
344 bp
Exon 4-Forward primer
5’-TGCAATGTCGCTATGTCCACACCA-3’
326 bp
Exon 4-Reverse primer
5’-GATCACACAGCAAAGAATCAGAATC-3’
326 bp
Table 2 Atox1 gene analysis in Wilson disease patients
Distribution of the variations detected in the Atox1-gene among the ATP7B-genotypes
Mutations in the ATP7B-gene
No. of patients
5’UTR -99 T>C
5’UTR -68 C>T
No variation within the sequence
Heterozygous
Homozygous
Heterozygous
Homozygous
H1096Q/H1096Q
22
6
4
-
-
12
R1041W/R1041W
2
-
2
G12810N/G12810N
1
-
1
G1266R/G1266R
1
1
-
G710A/G710A
1
1
K844k-fs/K844k-fs
1
1
W779X/W779X
1
1
D765N/Y741X
2
1
1
3400 Del C/2299InsC
1
1
3400 Del C/H1096Q
1
1
3400 Del C/G982V
1
1
3400 Del C/W779X
1
1
H1096Q/M769V
1
1
m.n.d./m.n.d.
11
7
2
4
H1096Q/m.n.d.
8
3
1
4
W 778 X/m.n.d.
1
1
W779X/m.n.d.
2
1
1
D765N/m.n.d.
2
2
G710S/m.n.d.
1
1
M769V/m.n.d.
1
1
2299 InsC/m.n.d.
1
1
Total
63
22
9
2
0
32
Table 3 Analysis of average ages of initial manifestation with regard to the variations detected in the Atox1 gene
Atox1-variation
Average age of initial manifestation
n of patiens
Standard deviation
No variation within the sequence
23.68
31
12.993
Variation within the sequence detected
18.88
25
9.909
Total
21.54
56
11.863
Table 4 Statistical data for Analysis of age of initial manifestation
Not standardized coefficients
Standardized coefficients
Model
B
Standard error
Beta
T
Significance
ATP7B
4.042
1.970
0.272
2.052
0.045
Atox1
-5.312
3.079
-0.225
-1.725
0.091
Citation: Simon I, Schaefer M, Reichert J, Stremmel W. Analysis of the human Atox 1 homologue in Wilson patients. World J Gastroenterol 2008; 14(15): 2383-2387