Copyright
©The Author(s) 2004.
World J Gastroenterol. Dec 15, 2004; 10(24): 3569-3573
Published online Dec 15, 2004. doi: 10.3748/wjg.v10.i24.3569
Published online Dec 15, 2004. doi: 10.3748/wjg.v10.i24.3569
Table 1 Primer sequences and annealing temperature for PCR
Gene | Primer sequences | Product size | Annealing temperature | |
RhoC | Up | 5’-TCCTCATCGTCTTCAGCAAG-3’ | 183 bp | 56 °C |
Down | 5’-CTGCAATCCGAAAGAAGCTG-3’ | |||
protocadherin | Up | 5’-GAAGCTTCAAGCTATGAAAA-3 | 256 bp | 52 °C |
LKC | Down | 5’-CCTTGATTTCCTGACTGTTC-3’ | ||
β2-MG | Up | 5’-ACCCCCACTGAAAAAGATGA-3’ | 120 bp | 56 °C |
Down | 5’-ATCTTCAAACCTCCATGATG-3’ |
Table 2 Numbers of variably expressed genes in SLHCC and NHCC
Class | No. of up-regulated genes | No. of down-regulated genes |
Oncogenes and antioncogenes | 6 | 5 |
Genes encoding proteins related to ionic channel and protein transportation | 7 | 7 |
Genes encoding cellular cycle modulator | 3 | 9 |
Genes associated with cellular stress | 1 | 1 |
Genes associated with cellular skeleton and movement | 5 | 7 |
Genes related to cellular apoptosis | 2 | 2 |
Gene encoding proteins regulating synthesis, repair, and rearrangement of DNA | 0 | 4 |
Genes encoding transcription factors and proteins binding with DNA | 17 | 6 |
Cytokine receptor gene | 4 | 3 |
Immunological protein gene | 18 | 17 |
Genes associated with cellular metabolism | 32 | 32 |
Genes encoding signal transductional factor | 39 | 31 |
Genes encoding factors that regulated protein translation | 11 | 37 |
Genes encoding proteins that were consistent with body growth and development | 7 | 8 |
Other | 203 | 144 |
- Citation: Yang LY, Wang W, Peng JX, Yang JQ, Huang GW. Differentially expressed genes between solitary large hepatocellular carcinoma and nodular hepatocellular carcinoma. World J Gastroenterol 2004; 10(24): 3569-3573
- URL: https://www.wjgnet.com/1007-9327/full/v10/i24/3569.htm
- DOI: https://dx.doi.org/10.3748/wjg.v10.i24.3569