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Kordaczuk J, Sułek M, Mak P, Frączek A, Wojda I. Chemosensory protein 16 has an immune function and participates in host-pathogen interaction in Galleria mellonella infected with Pseudomonas entomophila. Virulence 2025; 16:2471367. [PMID: 40019037 PMCID: PMC11875508 DOI: 10.1080/21505594.2025.2471367] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2024] [Revised: 12/18/2024] [Accepted: 02/09/2025] [Indexed: 03/01/2025] Open
Abstract
Chemosensory protein 16 was identified in the hemolymph of Galleria mellonella as a protein with an amount increasing after oral infection with 10^3 CFU of Pseudomonas entomophila, and decreasing after infection with a higher dose (10^5 CFU) of bacteria. The expression of the CSP16 gene occurred in the fat body and in the gut and correlated with changes in the protein level in the hemolymph. The CSP16 protein inhibited P. entomophila growth in the concentration range from 0.15 to 6 nM. Additionally, the CSP16 protein showed bactericidal activity against P. entomophila, Bacillus thuringiensis, and Escherichia coli in the range of 2-18 μM, but only in the presence of protease inhibitors, otherwise it was degraded by extracellular proteases secreted by P. entomophila. We demonstrated that the bactericidal activity of CSP16 was related to its ability to perforate bacterial cellular membranes in a dose-dependent manner. The antimicrobial properties of this protein were also confirmed with the use of Atomic Force Microscopy, which showed significant changes in the topology of different bacterial cell surfaces. Finally, when CSP16 was injected in vivo into G. mellonella larvae one hour after infection with P. entomophila, more survivors were observed at particular time-points. Taking into account its immune properties and putative ability to bind bacteria-derived compounds, the possible function of CSP16 in the host-pathogen interaction is discussed.
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Affiliation(s)
- Jakub Kordaczuk
- Institute of Biological Sciences, Department of Immunobiology, Maria Curie-Sklodowska University, Lublin, Poland
| | - Michał Sułek
- Institute of Biological Sciences, Department of Immunobiology, Maria Curie-Sklodowska University, Lublin, Poland
| | - Paweł Mak
- Faculty of Biochemistry, Biophysics and Biotechnology, Department of Analytical Biochemistry, Jagiellonian University, Kraków, Poland
| | - Alicja Frączek
- Faculty of Biochemistry, Biophysics and Biotechnology, Department of Analytical Biochemistry, Jagiellonian University, Kraków, Poland
- Doctoral School of Exact and Natural Sciences, Jagiellonian University, Kraków, Poland
| | - Iwona Wojda
- Institute of Biological Sciences, Department of Immunobiology, Maria Curie-Sklodowska University, Lublin, Poland
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Jung S, Jung Y, Sul H, Jung YG, Ham J, Oh D, Lee J, Hyun SH. L-proline supplementation in the freezing medium enhances the viability and quality of bovine blastocysts after slow freezing and thawing. Theriogenology 2025; 240:117399. [PMID: 40153975 DOI: 10.1016/j.theriogenology.2025.117399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2025] [Revised: 03/23/2025] [Accepted: 03/23/2025] [Indexed: 04/01/2025]
Abstract
L-proline (Pro) is a natural amino acid with known antioxidant and cryoprotectant activity. This study aimed to assess the impact of Pro supplementation in freezing medium on blastocyst survival and quality. In vitro fertilization (IVF) was conducted using oocytes collected from Korean cattle, and Day 7 blastocysts were cryopreserved through slow freezing. Optimal post-thaw blastocyst survival was determined by adding various Pro concentrations to the freezing medium. Additionally, the effect of Sucrose (Suc) alone or in conjunction with Pro was evaluated. To assess blastocyst quality, we analyzed reactive oxygen species (ROS) levels, apoptosis, and gene expression in blastocysts that survived 24 h after slow freezing-thawing. The hatching rate at 72 h was significantly higher in the 0.3 M Pro group than that in the 0 M group (p = 0.0466). The hatching rates at 48 and 72 h were significantly higher in the Pro group than in the Suc and Suc + Pro groups (48 h: Suc, p = 0.0037; Suc + Pro, p = 0.0052; 72 h: Suc, p = 0.0024; Suc + Pro, p = 0.0009). ROS levels and the apoptosis index were significantly lower in the Pro group than in the Suc group (p = 0.0099, and 0.0098, respectively). Furthermore, mRNA expression of HSPA1A was significantly lower in the Pro and Suc + Pro groups than in the Suc group (p = 0.0074, and p = 0.01174, respectively). Additionally, GCLC mRNA expression was significantly higher in the Pro group than in the Suc group (p = 0.0308). These findings indicate that Pro supplementation in a slow freezing medium enhances the viability and quality of embryos.
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Affiliation(s)
- Seungki Jung
- Veterinary Medical Center and College of Veterinary Medicine, Laboratory of Veterinary Embryology and Biotechnology (VETEMBIO), Chungbuk National University, Cheongju, 28644, Republic of Korea; ET Biotech Co. Ltd., Jangsu, 55609, Republic of Korea
| | - Yeonsub Jung
- ET Biotech Co. Ltd., Jangsu, 55609, Republic of Korea
| | - Hyeonseok Sul
- ET Biotech Co. Ltd., Jangsu, 55609, Republic of Korea
| | - Yeon-Gil Jung
- ET Biotech Co. Ltd., Jangsu, 55609, Republic of Korea
| | - Jaehyung Ham
- Veterinary Medical Center and College of Veterinary Medicine, Laboratory of Veterinary Embryology and Biotechnology (VETEMBIO), Chungbuk National University, Cheongju, 28644, Republic of Korea; Institute of Stem Cell & Regenerative Medicine (ISCRM), Chungbuk National University, Cheongju, 28644, Republic of Korea
| | - Dongjin Oh
- Veterinary Medical Center and College of Veterinary Medicine, Laboratory of Veterinary Embryology and Biotechnology (VETEMBIO), Chungbuk National University, Cheongju, 28644, Republic of Korea; Institute of Stem Cell & Regenerative Medicine (ISCRM), Chungbuk National University, Cheongju, 28644, Republic of Korea
| | - Joohyeong Lee
- Department of Companion Animal Industry, Semyung University, Jecheon, 27136, Republic of Korea.
| | - Sang-Hwan Hyun
- Veterinary Medical Center and College of Veterinary Medicine, Laboratory of Veterinary Embryology and Biotechnology (VETEMBIO), Chungbuk National University, Cheongju, 28644, Republic of Korea; Institute of Stem Cell & Regenerative Medicine (ISCRM), Chungbuk National University, Cheongju, 28644, Republic of Korea; Vet-ICT Convergence Education and Research Center (VICERC), Chungbuk National University, Cheongju, Republic of Korea; Chungbuk National University Hospital, Cheongju, Republic of Korea.
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Vlad ML, Mares RG, Jakobsson G, Manea SA, Lazar AG, Preda MB, Popa MA, Simionescu M, Schiopu A, Manea A. Therapeutic S100A8/A9 inhibition reduces NADPH oxidase expression, reactive oxygen species production and NLRP3 inflammasome priming in the ischemic myocardium. Eur J Pharmacol 2025; 996:177575. [PMID: 40180274 DOI: 10.1016/j.ejphar.2025.177575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2024] [Revised: 03/13/2025] [Accepted: 03/31/2025] [Indexed: 04/05/2025]
Abstract
Oxidative stress and alterations in redox signalling have been implicated in the pathophysiology of myocardial infarction (MI). NADPH oxidase (Nox) is an important source of reactive oxygen species (ROS) in the infarcted myocardium. Alarmin S100A8/A9 amplifies acute myocardial inflammation in MI and has been shown to be a promising therapeutic target to improve cardiac function post-MI. We aimed to elucidate the underlying mechanisms linking S100A8/A9, oxidative stress and the inflammatory response in MI. MI was induced by permanent left coronary artery ligation in C57BL/6J mice, followed by treatment with the S100A8/A9 inhibitor ABR-238901 (30 mg/kg) or PBS for 3 days. The in-vivo experiments were complemented with mechanistic studies on cultured macrophages (Mac), important cellular effectors in MI. Compared to sham-operated animals, we detected significant increases in the Nox1, Nox2, Nox4 catalytic subunits at mRNA and protein levels, and NADPH-dependent ROS production in the left ventricle of MI mice. S100A8/A9 blockade prevented the up-regulation of Nox1/2/4 expression, reduced ROS formation, suppressed NF-kB activation and prevented NLRP3 inflammasome priming and activation, leading to reduced levels of active IL-1β. In-vitro, S100A8/A9 induced gene expression of Nox catalytic subtypes and NLRP3 in Mac in a TLR4-dependent and dose-dependent manner. These effects were counteracted by pharmacological inhibition of S100A8/9, TLR4, Nox1/4 and Nox2. In conclusion, we show that Nox upregulation and ROS formation triggered by S100A8/A9 contributes to NLRP3 inflammasome priming and increased IL-1β production in the infarcted myocardium. These mechanisms can be therapeutically targeted to prevent inflammatory and oxidant myocardial damage in acute MI.
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Affiliation(s)
- Mihaela-Loredana Vlad
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Razvan Gheorghita Mares
- Department of Pathophysiology, George Emil Palade University of Medicine, Pharmacy, Science, and Technology of Targu Mures, Targu Mures, Romania; Department of Cardiology II, Emergency Clinical County Hospital, Targu Mures, Romania.
| | - Gabriel Jakobsson
- Department of Translational Medicine, Lund University, Malmö, Sweden.
| | - Simona-Adriana Manea
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Alexandra-Gela Lazar
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Mihai Bogdan Preda
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Mirel Adrian Popa
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Maya Simionescu
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
| | - Alexandru Schiopu
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania; Department of Translational Medicine, Lund University, Malmö, Sweden; Department of Internal Medicine, Skåne University Hospital, Lund, Sweden.
| | - Adrian Manea
- Institute of Cellular Biology and Pathology "Nicolae Simionescu" of the Romanian Academy, Bucharest, Romania.
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Augustine A, Messaabi A, Fantino E, Merindol N, Meddeb-Mouelhi F, Desgagné-Penix I. Multifactorial interaction and influence of culture conditions on yellow fluorescent protein production in Phaeodactylum tricornutum. BIORESOURCE TECHNOLOGY 2025; 425:132336. [PMID: 40044057 DOI: 10.1016/j.biortech.2025.132336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2024] [Revised: 03/02/2025] [Accepted: 03/02/2025] [Indexed: 03/16/2025]
Abstract
Phaeodactylum tricornutum is a promising host for light-driven synthesis of heterologous proteins. However, the marine cold-water environment and alkaline-acidic pH shifts in the culture, necessitated by the diatom's growth requirements. In this study, we analyzed the influence of growth condition on maturation and dynamics of the yellow fluorescent protein (YFP) in episomal-transformant P. tricornutum. A mathematical model was developed to detect the parameters that affect biomass and YFP production. Optimized conditions increased YFP mean fluorescence intensity (MFI) per cell by 4.2-fold (3.6 ± 0.6 to 15.4 ± 1.1) and total protein levels in the culture by 1.8-fold (123 ± 4 to 219 ± 9 µg L-1), without affecting biomass. YFP stability studies in P. tricornutum showed that the ubiquitin-proteasome system contributes the degradation of the recombinant protein, whereas newly synthesized YFP remains stable for up to 12 h. This optimization provides insights into the fluorescent protein-based heterologous production in diatoms.
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Affiliation(s)
- Arun Augustine
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada
| | - Anis Messaabi
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada
| | - Elisa Fantino
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada; Plant Biology Research Group, Université du Québec à Trois-Rivières, Trois-Rivières, Québec, Canada
| | - Natacha Merindol
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada
| | - Fatma Meddeb-Mouelhi
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada; Plant Biology Research Group, Université du Québec à Trois-Rivières, Trois-Rivières, Québec, Canada
| | - Isabel Desgagné-Penix
- Department of Chemistry, Biochemistry and Physics, Université du Québec à Trois-Rivières, 3351 boulevard des Forges, Trois-Rivières, QC G9A 5H7, Canada; Plant Biology Research Group, Université du Québec à Trois-Rivières, Trois-Rivières, Québec, Canada.
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Guillén S, Nadal L, Halaihel N, Mañas P, Cebrián G. Isolation and characterization of Salmonella Typhimurium SL1344 variants with increased resistance to different stressing agents and food processing technologies. Food Microbiol 2025; 128:104714. [PMID: 39952745 DOI: 10.1016/j.fm.2024.104714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2024] [Revised: 12/04/2024] [Accepted: 12/12/2024] [Indexed: 02/17/2025]
Abstract
In this study, resistant variants of Salmonella enterica serovar Typhimurium SL1344 to different stressors were selected. In addition, a genetic and phenotypic study was performed to explore the mechanisms underlying the acquisition of resistance. We isolated 4 variants with increased stable resistance to acid, osmotic stress, high hydrostatic pressure (HHP) and Ultraviolet-C light (UV-C) after repeated rounds of exposure to these agents and outgrowth of survivors. A PEF-resistant variant (SL1344-RS), previously isolated by Sagarzazu et al. (2013), was also included in the analysis. The results indicated that the isolated variants showed resistance to at least one other agent. This increased resistance, in general terms, had a fitness cost in growth, and exerted a variable impact on virulence (mainly in cell adhesion capacity), increased antibiotic resistance but did not influence in biofilm formation capacity. Whole Genome Sequencing (WGS) analysis allowed us to identify the genetic changes responsible for these phenotypic differences, and revealed that in 3 out of the 5 variants (including SL1344-RS) a mutation was found in hnr gene, an anti-sigma factor that promotes RpoS proteolysis. Hence the expression of several rpoS-regulated genes was quantified and found higher in these variants. This increase in RpoS activity would explain the lower growth rates observed in these 3 variants, as it would lead to increased transcription of genes involved in growth arrest and resistance to various types of stress. However, further analysis of a set of 22 additional Salmonella strains obtained from different culture collections indicated that a direct relationship between RpoS activity and stress resistance might not exist within Salmonella.
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Affiliation(s)
- S Guillén
- Departamento de Producción Animal y Ciencia de los Alimentos, Facultad de Veterinaria, Instituto Agroalimentario de Aragón- IA2, Universidad de Zaragoza-CITA, 50013, Zaragoza, Spain
| | - L Nadal
- Departamento de Producción Animal y Ciencia de los Alimentos, Facultad de Veterinaria, Instituto Agroalimentario de Aragón- IA2, Universidad de Zaragoza-CITA, 50013, Zaragoza, Spain
| | - N Halaihel
- Departamento I+D+i, Alquizvetek S.L, Zaragoza, 50013, Zaragoza, Spain
| | - P Mañas
- Departamento de Producción Animal y Ciencia de los Alimentos, Facultad de Veterinaria, Instituto Agroalimentario de Aragón- IA2, Universidad de Zaragoza-CITA, 50013, Zaragoza, Spain
| | - G Cebrián
- Departamento de Producción Animal y Ciencia de los Alimentos, Facultad de Veterinaria, Instituto Agroalimentario de Aragón- IA2, Universidad de Zaragoza-CITA, 50013, Zaragoza, Spain.
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Bokov RO, Sharlo KA, Vilchinskaya NA, Tyganov SA, Turtikova OV, Rozhkov SV, Deviatiiarov RM, Gusev OA, Tomilovskaya ES, Shenkman BS, Orlov OI. Molecular insights into human soleus muscle atrophy development: long-term dry immersion effects on the transcriptomic profile and posttranslational signaling. Physiol Genomics 2025; 57:357-382. [PMID: 40072920 DOI: 10.1152/physiolgenomics.00196.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2024] [Revised: 01/27/2025] [Accepted: 03/06/2025] [Indexed: 03/14/2025] Open
Abstract
Muscle disuse results in complex signaling alterations followed by structural and functional changes, such as atrophy, force decrease, and slow-to-fast fiber-type shift. Little is known about human skeletal muscle signaling alterations under long-term muscle disuse. In this study, we describe the effects of 21-day dry immersion on human postural soleus muscle. We performed both transcriptomic analysis and Western blots to describe the states of the key signaling pathways regulating soleus muscle fiber size, fiber type, and metabolism. Twenty-one-day dry immersion resulted in both slow-type and fast-type myofibers atrophy, downregulation of rRNA content, and mTOR signaling. Twenty-one-day dry immersion also leads to slow-to-fast fiber-type and gene expression shift, upregulation of p-eEF2, p-CaMKII, p-ACC content and downregulation of NFATc1 nuclear content. It also caused massive gene expression alterations associated with calcium signaling, cytoskeletal parameters, and downregulated mitochondrial signaling (including fusion, fission, and marker of mitochondrial density).NEW & NOTEWORTHY The main findings of our study are as follows: 1) The soleus slow fibers atrophy after 21-day dry immersion (DI) does not exceed that after 7-day DI; 2) The soleus ubiquitin ligases expression after 21-day DI returns to its initial level; 3) The soleus slow fibers atrophy after 21-day DI is accompanied by a mitochondrial apparatus structural markers decrease; 4) The soleus fibers signaling pathways restructuring process during 21-day DI is carried out in a complex manner.
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Affiliation(s)
- Roman O Bokov
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | - Kristina A Sharlo
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | | | - Sergey A Tyganov
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | - Olga V Turtikova
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | - Sergey V Rozhkov
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | | | - Oleg A Gusev
- Life Improvement by Future Technologies Center, Moscow, Russia
| | | | - Boris S Shenkman
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
| | - Oleg I Orlov
- Institute of Biomedical Problems, Russian Academy of Sciences, Moscow, Russia
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Goropashnaya AV, Bergua IY, Sugiura MH, Rice SA, Drew KL, Dupont-Versteegden EE, Fedorov VB. Skeletal muscle preservation in arctic ground squirrels during hibernation season. Comp Biochem Physiol A Mol Integr Physiol 2025; 304:111847. [PMID: 40122513 PMCID: PMC12019857 DOI: 10.1016/j.cbpa.2025.111847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2025] [Revised: 03/18/2025] [Accepted: 03/19/2025] [Indexed: 03/25/2025]
Abstract
Reduced skeletal loading and inactivity leads to muscle atrophy in humans and most mammals. By contrast, hibernating mammals demonstrate limited loss of skeletal muscle mass and strength by the end of winter after being physically inactive for several months. The present study objective was to detect any signs of muscle atrophy and restoration in arctic ground squirrel (AGS) skeletal muscles during the hibernation season. Quadriceps muscles of juvenile AGS males were collected 1-2 weeks before hibernation, and at 2, 6, 10-12 and 16-22 weeks after onset of hibernation during interbout arousal when body temperature returns to euthermic level. Muscle mass, fiber cross-sectional area (CSA) and fiber type composition were determined, as well as total and ribosomal RNA content, and expression of key genes involved in protein degradation. We found that muscle mass, CSA and fiber size distribution were not different between the groups (P > 0.05). No difference was detected in myofiber composition between the hibernation groups compared to pre-hibernation. Total RNA and ribosomal RNA content were not significantly different between the groups during hibernation. Transcript levels of ubiquitin E3-ligase FBXO32 (Atrogin-1, MAFbx) and autophagy related genes MAP1LC3A and BECN1 were not different between the hibernation and pre-hibernation groups. However, ubiquitin E3-ligase TRIM63 (MuRF-1) was significantly higher expressed at 2 weeks of hibernation compared to the other timepoints. These results, for the first time, show that AGS preserve muscles during hibernation season.
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Affiliation(s)
- Anna V Goropashnaya
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
| | - Inigo Yoldi Bergua
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
| | - M Hoshi Sugiura
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
| | - Sarah A Rice
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
| | - Kelly L Drew
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
| | - Esther E Dupont-Versteegden
- Department of Physical Therapy, College of Health Sciences, University of Kentucky, 900 S. Limestone CTW 210E, KY, 40536-0200, USA; Center for Muscle Biology, Charles T. Wethington Jr. Building, 900 S. Limestone University of Kentucky, Lexington, KY 40536-0200, USA.
| | - Vadim B Fedorov
- Institute of Arctic Biology, 2140 Koyukuk Drive, Irving 1, Rm 313, University of Alaska Fairbanks, Fairbanks, AK 99775-7000, USA.
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Formoso SO, Chaleix V, Baccile N, Helary C. Cytotoxicity evaluation of microbial sophorolipids and glucolipids using normal human dermal fibroblasts (NHDF) in vitro. Toxicol Rep 2025; 14:101862. [PMID: 39802599 PMCID: PMC11719410 DOI: 10.1016/j.toxrep.2024.101862] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2024] [Revised: 12/08/2024] [Accepted: 12/10/2024] [Indexed: 01/16/2025] Open
Abstract
Fibroblasts are considered a key player in the wound healing process. Although this cellular family is constituted by several distinct subtypes, dermal fibroblasts are crucial thanks to their ability to secrete pro-regenerative growth factors, extracellular matrix (ECM) proteins and their immune and anti-inflammatory role. Sophorolipids (SL), sophorosides (SS) and glucolipids (G), mono-unsaturated (C18:1) or saturated (C18:0), glycolipids derived from microbial fermentation of wild type or engineered yeast Starmerella bombicola, constitute a novel sustainable class of bio-based chemicals with interesting physicochemical characteristics, which allow them to form soft diverse structures from hydrogels to vesicles, micelles or complex coacervates with potential interest in skin regeneration applications. In this study, we first tested the cytocompatibility of a broad set of molecules from this family on normal human dermal fibroblasts (NHDF). Our results show that, up to an upper threshold (0.1 % w/v), the microbial glycolipids (SL-C18:1, G-C18:1, SSbola-C18:1, SL-C18:0 and G-C18:0) under study were able to sustain cell growth. Furthermore, we selected the least cytotoxic glycolipids (SL-C18:1, SSbola-C18:1, SL-C18:0) to study their potential to promote wound healing by measuring the gene expression of several key skin regeneration markers (i.e. collagen, elastin, transforming growth factor β, fibroblast growth factor …) using qPCR. Unfortunately, none of these glycolipids modulated the gene expression of molecules involved in tissue repair. However, this study aims to encourage the community to test this novel class of molecules for novel high-end biomedical applications. Importance Biosurfactants prepared by microbial fermentation are natural amphiphiles of growing importance, with the goal of replacing synthetic surfactants in commercial formulations. However, their cytotoxicity profile is still poorly known, especially for new molecules like single-glucose lipids or bolaform sophorolipids. This wants to contribute to all those applications, which could be developed with biosurfactants in contact with the skin (cosmetics, wound healing). We test the cytotoxicity of five structurally-related molecules (C18:1 and C18:0 sophorolipids, C18:1 and C18:0 single-glucose lipids, C18:1 di-sophoroside) against normal human dermal fibroblasts (NHDF) and evaluate the metabolic activity of the least toxic among them. To the best of our knowledge, cytotoxicity of these molecules, and of microbial biosurfactants in general, was never tested against NHDF.
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Affiliation(s)
- Sergio Oliveira Formoso
- Sorbonne Université, Centre National de la Recherche Scientifique, Laboratoire de Chimie de la Matière Condensée de Paris, LCMCP, Paris F-75005, France
| | - Vincent Chaleix
- Université de Limoges, Faculté des sciences et techniques, Laboratoire LABCiS - UR 22722, Limoges 87060, France
| | - Niki Baccile
- Sorbonne Université, Centre National de la Recherche Scientifique, Laboratoire de Chimie de la Matière Condensée de Paris, LCMCP, Paris F-75005, France
| | - Christophe Helary
- Sorbonne Université, Centre National de la Recherche Scientifique, Laboratoire de Chimie de la Matière Condensée de Paris, LCMCP, Paris F-75005, France
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Klak K, Maciuszek M, Michalik A, Mazur M, Zawisza M, Pecio A, Nowak B, Chadzinska M. Fire in the belly: Stress and antibiotics induce dysbiosis and inflammation in the gut of common carp. FISH & SHELLFISH IMMUNOLOGY 2025; 161:110301. [PMID: 40157582 DOI: 10.1016/j.fsi.2025.110301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2024] [Revised: 03/12/2025] [Accepted: 03/26/2025] [Indexed: 04/01/2025]
Abstract
Fish are exposed to numerous stressors which negatively affect their immune response and increase infection susceptibility. The risk of bacterial infections results in the excessive and preventive use of antibiotics. Therefore, we aimed to study how antibiotic treatment and restraint stress will affect the stress response, microbiota composition, gut morphology, and inflammatory reaction in common carp. Both restraint stress and antibiotic treatment increased cortisol level. Moreover, antibiotics induced dysbiosis in fish gut, manifested by a decrease in the total abundance of bacteria, and a shift in bacteria diversity, including a reduced number of Aeromonas, Bacteroides, Barnesiellaceae, Cetobacterium and Shewanella and an increased abundance of Flavobacterium. To a lesser extent, stress modified gut microbiota, as it decreased bacteria number and slightly changed the microbiota composition by decreasing Cetobacterium abundance and increasing Vibrio abundance. Microbiota of the antibiotic-treated and stressed fish shifted from the beneficial bacterial genera - Cetobacterium and Bacteroides, to the increased presence of unfavorable bacteria such as Brevinema, Flavobacterium and Desulfovibrionaceae. Stress and antibiotic-induced changes in the gut microbiota were related to the changes in the gut morphology when the higher abundance of goblet and rodlet cells and increased secretion activity of goblet cells were observed. Moreover, up-regulation of the expression of genes encoding pro-inflammatory mediators and cytokines involved in the Th17 immune response was present in the gut of the antibiotic-treated and stressed fish. We conclude that in carp antibiotics and stress alter the abundance and composition of the microbiota and induce Th17-dependent inflammatory reaction in the gut. Moreover, our results strongly suggest the interplay of the stress axis and the brain-gut-microbiota axis.
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Affiliation(s)
- Katarzyna Klak
- Department of Evolutionary Immunology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland; Doctoral School of Exact and Natural Sciences, Jagiellonian University, Krakow, Poland.
| | - Magdalena Maciuszek
- Department of Evolutionary Immunology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland.
| | - Anna Michalik
- Department of Invertebrate Development and Morphology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland.
| | - Mikolaj Mazur
- Department of Evolutionary Immunology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland; Doctoral School of Exact and Natural Sciences, Jagiellonian University, Krakow, Poland.
| | - Maria Zawisza
- Department of Evolutionary Immunology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland; Doctoral School of Exact and Natural Sciences, Jagiellonian University, Krakow, Poland.
| | - Anna Pecio
- Department of Comparative Anatomy, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland.
| | - Barbara Nowak
- Institute for Marine and Antarctic Studies - Launceston, University of Tasmania, Launceston, Tasmania, Australia.
| | - Magdalena Chadzinska
- Department of Evolutionary Immunology, Institute of Zoology and Biomedical Research, Faculty of Biology, Jagiellonian University, Krakow, Poland.
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10
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Ratner LD, Marcial Lopez A, Di Giorgio NP, Poutanen M, Huhtaniemi I, Rulli SB. Maternal dopamine agonist treatment before pregnancy reverses infertility and hyperprolactinemia in hCG-overexpressing mice through lactation: Evidence of generational effects. Mol Cell Endocrinol 2025; 602:112538. [PMID: 40187547 DOI: 10.1016/j.mce.2025.112538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/30/2025] [Revised: 04/01/2025] [Accepted: 04/02/2025] [Indexed: 04/07/2025]
Abstract
Dopamine agonists, such as cabergoline (Cab), have demonstrated efficacy in restoring reproductive function in cases of hyperprolactinemia and hormonal dysregulation. This study investigates the long-term consequences of maternal Cab treatment on the reproductive phenotype of the progeny in a female transgenic (TG) mouse model with hyperprolactinemia and infertility due to human chorionic gonadotropin (hCG) β-subunit overexpression. The TG females that received Cab between weeks 3-4 of life exhibited a reversion of hyperprolactinemia and infertility, whereas WT females retained their fertility. When TG-cab- or WT-Cab-treated females were crossed with WT or TG males, respectively, their female TG offspring showed a reversal of precocious puberty, regularization of estrous cycles, fertility, and prevention of hyperprolactinemia and prolactinomas. Despite the persistent high LH/hCG bioactivity, the normalization of prolactin levels led to a reduction in ovarian luteinization markers and progesterone levels. The TG female pups born to either WT-cab- or TG-cab-treated females exhibited a normalized phenotype, thus suggesting that the effects were indeed due to maternal Cab administration, and not to the transgene. Cross-fostering experiments showed that the long-lasting programming effect of maternal Cab on offspring occurred during lactation because the TG female pups from non-treated WT female/TG male pregnancies, but nursed by Cab-treated females, were free from the altered TG phenotype. These results suggest that Cab treatment before pregnancy may have a multigenerational effect on the hypothalamic-pituitary-gonadal axis of the offspring, mediated during lactation. This highlights potential implications for generational health and clinical practices regarding the use of dopamine agonists during lactation.
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Affiliation(s)
- Laura D Ratner
- Instituto de Biología y Medicina Experimental-CONICET, Vuelta de Obligado 2490 (1428), Buenos Aires, Argentina
| | - Agustina Marcial Lopez
- Instituto de Biología y Medicina Experimental-CONICET, Vuelta de Obligado 2490 (1428), Buenos Aires, Argentina
| | - Noelia P Di Giorgio
- Instituto de Biología y Medicina Experimental-CONICET, Vuelta de Obligado 2490 (1428), Buenos Aires, Argentina
| | - Matti Poutanen
- Institute of Biomedicine, Research Centre for Integrative Physiology and Pharmacology, University of Turku, Kiinamyllynkatu 10, FIN-20520, Turku, Finland; Turku Center for Disease Modeling, University of Turku, Kiinamyllynkatu 10, FIN-20520, Turku, Finland
| | - Ilpo Huhtaniemi
- Institute of Biomedicine, Research Centre for Integrative Physiology and Pharmacology, University of Turku, Kiinamyllynkatu 10, FIN-20520, Turku, Finland; Department of Digestion, Metabolism and Reproduction, Institute of Reproductive and Developmental Biology, Hammersmith Campus, Imperial College London, London, W12 0NN, UK
| | - Susana B Rulli
- Instituto de Biología y Medicina Experimental-CONICET, Vuelta de Obligado 2490 (1428), Buenos Aires, Argentina; Centro de Estudios Biomédicos Básicos, Aplicados y Desarrollo (CEBBAD), Universidad Maimónides, Hidalgo 775 Ciudad Autónoma de, C1405BCK, Buenos Aires, Argentina.
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11
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Core JD, Jure I, Silva Sofrás FM, Pietranera L, Ronchetti S, Roig P, Desimone MF, De Nicola AF, Labombarda F. Cannabidiol/tetrahydrocannabinol-enrich extract decreases neuroinflammation and improves locomotor outcome following spinal cord injury. Neuroscience 2025; 573:468-481. [PMID: 40157632 DOI: 10.1016/j.neuroscience.2025.03.055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Revised: 03/07/2025] [Accepted: 03/23/2025] [Indexed: 04/01/2025]
Abstract
Neuroinflammation is one of the main players in lesion expansion and locomotor deficits after spinal cord injury (SCI), thus treatments to control the inflammatory process emerge as novel therapeutic strategies. In this context, the anti-inflammatory effects of tetrahydrocannabinol (THC) and cannabidiol (CBD), the main phytocannabinoids of Cannabis sativa, are increasingly recognized. The aim of this work was to investigate the effects of a standardized Cannabis sativa extract (CSE), which is mainly composed by THC/CBD in equimolar concentration, on neuroinflammation, secondary damage and locomotor outcome after SCI in rats. After acute SCI, CSE therapy increased the number of non-inflammatory (arginase-1 positive) microglial cells in the epicenter of the lesion and decreased the number of pro-inflammatory ones (arginase-1 negative) in the epicenter and in the rostral and caudal regions of the lesion. CSE also reduced the number of reactive astrocytes in the grey matter of the rostral and caudal regions. These results are consistent with the downregulation of mRNAs of inflammatory mediators (IL-1β, TNFα, IL-6, C3) and the upregulation of anti-inflammatory markers (ARG-1, MRC). In the chronic phase, CSE treatment prevented cyst expansion and also increased the volume of spared grey and white matter. Regarding locomotor outcome, CSE-treated rats showed better locomotor scores (open field test), higher latency to fall (Rotarod test) and lower number of hindlimb foot misplacements (horizontal ladder walking test) than untreated injured rats. These results suggest that this standardized CSE offers a promising perspective for reducing acute neuroinflammation and promoting functional recovery after SCI.
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Affiliation(s)
- Julián Del Core
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina
| | - Ignacio Jure
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina
| | - Fresia Melina Silva Sofrás
- Cátedra de Química Analítica Instrumental, Facultad de Farmacia y Bioquímica, UBA. Junín 954, ZipCode: C1113AAD, Argentina
| | - Luciana Pietranera
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina; Dept. Bioquimica Humana, Facultad de Medicina, Universidad de Buenos Aires, (UBA). Paraguay 2125, ZipCode: 1121, Argentina
| | - Santiago Ronchetti
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina
| | - Paulina Roig
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina
| | - Martin Federico Desimone
- Cátedra de Química Analítica Instrumental, Facultad de Farmacia y Bioquímica, UBA. Junín 954, ZipCode: C1113AAD, Argentina; IQUIMEFA (Instituto de Química y Metabolismo del Fármaco) UBA-CONICET, Junín 954, ZipCode: C1113AAD, Argentina
| | - Alejandro Federico De Nicola
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina; Dept. Bioquimica Humana, Facultad de Medicina, Universidad de Buenos Aires, (UBA). Paraguay 2125, ZipCode: 1121, Argentina
| | - Florencia Labombarda
- Laboratory of Neuroendocrine Biochemistry, Instituto de Biologia y Medicina Experimental, CONICET, Vuelta de Obligado 2490, ZipCode:1428 Buenos Aires, Argentina; Dept. Bioquimica Humana, Facultad de Medicina, Universidad de Buenos Aires, (UBA). Paraguay 2125, ZipCode: 1121, Argentina.
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12
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Yuen NKY, Eng M, Hudson NJ, Sole-Guitart A, Coyle MP, Bielefeldt-Ohmann H. Distinct cellular and molecular responses to infection in three target cell types from horses, a species naturally susceptible to Ross River virus. Microb Pathog 2025; 202:107408. [PMID: 40010657 DOI: 10.1016/j.micpath.2025.107408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Revised: 02/18/2025] [Accepted: 02/20/2025] [Indexed: 02/28/2025]
Abstract
Our current understanding of the pathogenesis of Ross River virus (RRV) infection has been derived from murine models, which do not reproduce clinical disease as experienced by infected humans and horses. This prompted us to establish more relevant host model systems to study host-virus interactions using ex vivo peripheral blood mononuclear cells (PBMCs) and in vitro primary synovial fibroblast and epidermal keratinocyte cultures. Transcriptomic analysis revealed that the expression of the transmembrane protein matrix remodelling associated 8 (mxra8), recently found to be responsible for RRV cell entry, was downregulated in all cell types when infected with RRV, compared to mock-infected controls. Potent antiviral and inflammatory responses were generated by both synovial fibroblasts and epidermal keratinocytes upon RRV infection. Upregulation of multiple genes, inducible by double-stranded RNA, together with upregulation of toll-like receptor (TLR) tlr-3, but not tlr-7, 8 and 9, suggests possible abortive replication of RRV in these cell types and potent antiviral mechanisms. This was corroborated by virus growth kinetic studies which indicated inefficient RRV replication in synovial fibroblasts and epidermal keratinocytes. Cellular metabolic flux studies on PBMCs and synovial fibroblasts showed that RRV infected cells had reduced mitochondrial function. In addition, compared to PBMCs of seronegative horses, an enhanced antiviral state and reduced inflammation related gene expression was seen in PBMCs of seropositive horses infected with RRV. Thus, despite potent antiviral and inflammatory responses via the interferon pathway exhibited in all cell types, restricting virus growth, mitochondria capacity and function of infected cells remained negatively impacted.
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Affiliation(s)
- Nicholas K Y Yuen
- School of Veterinary Science, Faculty of Science, University of Queensland, Gatton, Queensland, Australia.
| | - Melodie Eng
- School of Veterinary Science, Faculty of Science, University of Queensland, Gatton, Queensland, Australia
| | - Nicholas J Hudson
- School of Agriculture and Food Sustainability, Faculty of Science, University of Queensland, Gatton, Queensland, Australia
| | - Albert Sole-Guitart
- School of Veterinary Science, Faculty of Science, University of Queensland, Gatton, Queensland, Australia
| | - Mitchell P Coyle
- Equine Unit, Office of the Director Gatton Campus, Faculty of Science, University of Queensland, Gatton, Queensland, Australia
| | - Helle Bielefeldt-Ohmann
- School of Chemistry and Molecular Biosciences, Faculty of Science, University of Queensland, St Lucia, Queensland, Australia; Australian Infectious Diseases Research Centre, University of Queensland, St Lucia, Queensland, Australia.
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13
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Lee D, Lee JH, Kim KH, Choi CY, Kang JC, Kim JH. Expression of antioxidant and stress-related genes in olive flounder, Paralichthys olivaceus exposed to high temperatures after pre-heating. Comp Biochem Physiol C Toxicol Pharmacol 2025; 291:110147. [PMID: 39965750 DOI: 10.1016/j.cbpc.2025.110147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/21/2024] [Revised: 01/25/2025] [Accepted: 02/12/2025] [Indexed: 02/20/2025]
Abstract
The rising sea surface temperatures driven by climate change cause thermal stress, leading to oxidative stress, metabolic disorders, and increased disease susceptibility, thereby impairing the physiological functions of fish. Therefore, understanding the adaptation mechanisms of fish to high temperatures is essential for mitigating the negative impacts of thermal stress on aquaculture productivity and fish health. In this study, Paralichthys olivaceus were subjected to high temperatures following pre-heating to evaluate the advantages of pre-stimulation prior to exposure to the critical temperature. The P. olivaceus were exposed to four groups; Acute (subjected to acute heat shock at 32 °C), AH-S (exposed to acquired heat shock at 28 °C followed by short recovery of 2 h and subsequent heat shock at 32 °C), AH-L (exposed to acquired heat shock at 28 °C followed by long recovery of 2 days and subsequent heat shock at 32 °C) and AH-SL (combined of AH-S and AH-L protocols). In terms of antioxidant response, mRNA expression (caspase 10, thioredoxin (Trx), superoxide dismutase (SOD), peroxiredoxin (Prx), glutathione-S-transferase (GST), and transferrin (TF)) and enzyme activities (SOD, CAT, and GST) were significantly upregulated in P. olivaceus pre-heated prior to high-temperature exposure (AH-S, AH-L, and AH-SL groups). In addition, the stress gene expressions such as heat shock protein 70 (HSP70), HSP60, HSP90, warm-temperature-acclimation-associated 65-kDa protein (Wap65-1), and glucose-regulated protein 78 (GRP78) was significantly upregulated in AH-S, AH-L and AH-SL groups. Pre-heating has been found to be effective in mitigating thermal stress, with the efficacy varying according to the differences in pre-heating methods.
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Affiliation(s)
- Dain Lee
- Genetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, South Korea
| | - Ju-Hyeong Lee
- Department of Aquatic Life Medicine, Pukyong National University, Busan 48513, South Korea
| | - Kyung-Hee Kim
- Genetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, South Korea
| | - Cheol Young Choi
- Division of Marine BioScience, National Korea Maritime and Ocean University, Busan 49112, South Korea.
| | - Ju-Chan Kang
- Department of Aquatic Life Medicine, Pukyong National University, Busan 48513, South Korea.
| | - Jun-Hwan Kim
- Department of Aquatic Life Medicine, Jeju National University, Jeju 63243, Republic of Korea; Department of Marine Life Science, Jeju National University, Jeju 63243, Republic of Korea.
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14
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Øvergård AC, Borchel A, Eichner C, Hjertaker S, Nagata J, Midtbø HMD, Nelson PA, Nilsen F, Hamre LA. The generalist Caligus elongatus is better at dampening the Atlantic salmon immune response than the salmonid specialist Lepeophtheirus salmonis. FISH & SHELLFISH IMMUNOLOGY 2025; 160:110225. [PMID: 39993487 DOI: 10.1016/j.fsi.2025.110225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2025] [Revised: 02/21/2025] [Accepted: 02/21/2025] [Indexed: 02/26/2025]
Abstract
The sea lice Caligus elongatus and Lepeophtheirus salmonis are both causing problems in salmonid aquaculture. Since the salmonid specialist L. salmonis represents the dominating problem, research on host-parasite interactions has focused on L. salmonis and Atlantic salmon (Salmo salar), while less is known for the generalist C. elongatus. As new knowledge can be found in the comparison between a specialist and a generalist, the present study compares the salmon immune responses and louse modulatory proteins between C. elongatus and L. salmonis. While the severity of skin lesions inflicted underneath both lice species appeared similar, C. elongatus seemed to be better at dampening inflammatory responses than L. salmonis. A comparison of exocrine gland genes encoding proteins with known effect at the host-parasite interface showed that C. elongatus express most of the genes previously identified in L. salmonis. Interestingly, three orthologues of the labial gland protein 3 (LGP3) known to induce cell death in salmonid immune cells were found. This expansion of the LGP3 gene might explain the limited influx of immune cells observed underneath C. elongatus, though yet unknown C. elongatus specific glandular proteins might also be at play. Despite the limited inflammatory response induced by adult C. elongatus, they provoke a forceful host anti-lice behaviour that is comparably less prominent in salmon infested with L. salmonis. Setule-like processes identified on the ventral surface of the C. elongatus marginal membrane might be of importance here, as could species specific behavioural differences or differences in the host modulatory proteins.
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Affiliation(s)
- Aina-Cathrine Øvergård
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway.
| | - Andreas Borchel
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Christiane Eichner
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Sol Hjertaker
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Jun Nagata
- Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato, Hakodate, Hokkaido, 041-8611, Japan
| | - Helena Marie Doherty Midtbø
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Patrick Alexander Nelson
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Frank Nilsen
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
| | - Lars Are Hamre
- SLCR-Sea Lice Research Centre, Department of Biological Sciences, University of Bergen, Pb. 7803, Bergen, NO-5020, Norway
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15
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Turbant F, Lewandowska N, Bloch S, Wien F, Chauvet H, Węgrzyn G, Arluison V. Hfq influences ciprofloxacin accumulation in Escherichia coli independently of ompC and ompF post-transcriptional regulation. J Appl Genet 2025; 66:449-457. [PMID: 39920540 DOI: 10.1007/s13353-025-00945-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Revised: 01/21/2025] [Accepted: 01/22/2025] [Indexed: 02/09/2025]
Abstract
The antibiotic resistance of pathogenic bacteria is currently one of the major problems in medicine, and finding novel antibacterial agents is one of the most difficult tasks in the field of biomedical sciences. Studies on such tasks can be successful only if genetic and molecular mechanisms leading to antibiotic resistance/sensitivity are understood. Previous reports indicated that the bacterial protein Hfq, discovered as an RNA chaperone but subsequently demonstrated to play also other functions in cells, is involved in the mechanisms of the response of bacterial cells to antibiotics. Recently, it was found that Hfq dysfunction resulted in more effective accumulation of an antibiotic ciprofloxacin in Escherichia coli cells irrespective of the presence or absence of the AcrB efflux pump. However, small RNA-mediated impairment of expression of the ompF gene, which encodes a porin involved in antibiotics influx, reversed the effects of the absence of Hfq on the antibiotic accumulation. This led to the hypothesis that Hfq might influence ciprofloxacin accumulation in the manner independent on its RNA chaperone function, as this protein might also influence cellular membrane structure and functions. Here, we demonstrate that in ompC and ompF mutants of E. coli, accumulation of ciprofloxacin is significantly impaired in the absence of Hfq or its C-terminal domain. These results corroborate the above-mentioned hypothesis on a sRNA-independent mechanism of Hfq-mediated modulation of the antibiotic transmembrane transport. Since fluoroquinolones use both protein- and lipid-mediated pathways to cross the outer membrane, Hfq may influence both processes. This possibility will be discussed herein.
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Affiliation(s)
- Florian Turbant
- Synchrotron SOLEIL, L Orme Des Merisiers, Saint Aubin BP48, 91192, Gif-Sur-Yvette, France
- Laboratoire Léon Brillouin LLB, UMR12, CEA CNRS, CEA Saclay, 91191, Gif-Sur-Yvette, France
- Department of Molecular Biology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, 80-308, Gdansk, Poland
| | - Natalia Lewandowska
- Department of Molecular Biology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, 80-308, Gdansk, Poland
| | - Sylwia Bloch
- Department of Molecular Biology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, 80-308, Gdansk, Poland
| | - Frank Wien
- Synchrotron SOLEIL, L Orme Des Merisiers, Saint Aubin BP48, 91192, Gif-Sur-Yvette, France
| | - Hugo Chauvet
- Synchrotron SOLEIL, L Orme Des Merisiers, Saint Aubin BP48, 91192, Gif-Sur-Yvette, France
| | - Grzegorz Węgrzyn
- Department of Molecular Biology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, 80-308, Gdansk, Poland.
| | - Véronique Arluison
- Laboratoire Léon Brillouin LLB, UMR12, CEA CNRS, CEA Saclay, 91191, Gif-Sur-Yvette, France.
- UFR SDV, Université Paris Cité, 75013, Paris, France.
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16
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Li H, Li X, Liu Y, Xing R, Zhang H, Jia W, Chen L, Li R, Yu Z, Tang Z. Algicidal activity and mechanism of novel Bacillamide a derivative against red tide algae Skeletonema costatum and Prorocentrum minimum. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2025; 210:106379. [PMID: 40262886 DOI: 10.1016/j.pestbp.2025.106379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2024] [Revised: 02/26/2025] [Accepted: 03/08/2025] [Indexed: 04/24/2025]
Abstract
Frequent red tide outbreaks pose a serious threat to biodiversity and the safety of aquatic ecosystems. Bacillamides showed algicidal activity against algae. However, the low natural concentrations and their structural complexity hinder development of these molecules. Inspired by the natrual algicide Bacillamide A, a series of thiourea derivatives were synthesized. Bacillamide A derivative (3B) showed excellent algicidal activity against S. costatum (EC50 = 0.52 μg/mL) and P. minimum (EC50 = 2.99 μg/mL), respectively. In addition, it has low toxicity to mammals and is less toxic than copper sulfate. 3B treatment resulted in loss of algal cell integrity. It also decreased the Chlorophyll a content and Fv/fm of algal cells, while increasing the levels of malondialdehyde content, superoxide dismutase, and reactive oxygen. 3B also induced expression of the photosynthetic genes, including psaB, psbB, as well as the antioxidant genes SOD2 and CAT. This study demonstrates that Bacillamide A derivatives could provide a safer alternative for red tide algal management.
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Affiliation(s)
- Huili Li
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Xiaoxue Li
- College of Chemistry and Chemical Engineering, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Yi Liu
- College of Chemistry and Chemical Engineering, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Ronglian Xing
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Hongxia Zhang
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Wenguang Jia
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Lihong Chen
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Rui Li
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Zhen Yu
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
| | - Zhihong Tang
- College of Life Sciences, Yantai University, Yantai, Shandong Province 264005, PR China
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17
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Deng YJ, Duan AQ, Li T, Tan SS, Liu SS, Wang YH, Ma J, Li JW, Liu H, Xu ZS, Liang Y, Zhou JH, Xiong AS. Altering Carotene Hydroxylase Activity of DcCYP97C1 Affects Carotenoid Flux and Changes Taproot Colour in Carrot. PLANT, CELL & ENVIRONMENT 2025; 48:3118-3135. [PMID: 39692072 DOI: 10.1111/pce.15331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Revised: 11/02/2024] [Accepted: 12/02/2024] [Indexed: 12/19/2024]
Abstract
CYP97C1 as a haem-containing cytochrome P450 hydroxylase (P450-type) is important for carotene hydroxylation and xanthophyll biosynthesis. Research about this type of hydroxylase was mainly reported in several model plant species which have no specialized tissues accumulating massive carotenoids. The function of CYP97C1 in the horticultural plant, like carrots, was not fully studied. In this study, we focused on the role of DcCYP97C1 in carotenoid flux and colour formation in carrot. DcCYP97C1 was found highly expressed in the 'turning stage' of carrot taproot. Using stable transformation and CRISPR/Cas9-mediated gene knockout technology, DcCYP97C1 was confirmed the rate-limiting enzyme for lutein biosynthesis and important for taproot colour formation. Overexpression of DcCYP97C1 in an orange carrot KRD (Kurodagosun) resulted in five times overproduction of lutein accompanied by dramatic reduction of carotenes. Knockout of DcCYP97C1 in orange KRD and yellow carrot QTH (Qitouhuang) reduced all kinds of carotenoids including lutein, α-carotene and β-carotene reflecting the key role of DcCYP97C1 for total carotenoid accumulation in taproot 'turning stage'. Our study demonstrated that manipulation of DcCYP97C1 was sufficient to influence carotenoid flux, change carrot colour and for high lutein production. The uncovered role of DcCYP97C1 may be helpful for understanding plant carotenoid metabolism and breeding colourful carrot cultivars.
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Affiliation(s)
- Yuan-Jie Deng
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Ao-Qi Duan
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Tong Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Shan-Shan Tan
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Shan-Shan Liu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Ya-Hui Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Jing Ma
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Jing-Wen Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Hui Liu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Zhi-Sheng Xu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Yi Liang
- Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Jian-Hua Zhou
- Institute of Agricultural Science and Technology of Zhengzhou, Zhengzhou, China
| | - Ai-Sheng Xiong
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing, China
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18
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Cappetta E, Del Regno C, Ceccacci S, Monti MC, Spinelli L, Conte M, D'Anna C, Alfieri M, Vietri M, Costa A, Leone A, Ambrosone A. Proteome Reprogramming and Acquired Stress Tolerance in Potato Cells Exposed to Acute or Stepwise Water Deficit. PLANT, CELL & ENVIRONMENT 2025; 48:2875-2894. [PMID: 39639630 PMCID: PMC11963495 DOI: 10.1111/pce.15306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 11/08/2024] [Accepted: 11/11/2024] [Indexed: 12/07/2024]
Abstract
Water deficit negatively impacts crop productivity and quality. Plants face these challenges by adjusting biological processes and molecular functions according to the intensity and duration of the stress. The cultivated potato (Solanum tuberosum) is considered sensitive to water deficit, thus breeding efforts are needed to enhance its resilience. To capture novel functional information and gene regulatory networks, we carried out mass spectrometry-based proteomics in potato cell suspensions exposed to abrupt or stepwise osmotic stresses. Both forms of stress triggered significant alterations in protein expression, though with divergent response mechanisms. Stress response pathways orchestrated by key proteins enrolled in primary and secondary metabolism, antioxidant processes, transcriptional and translational machinery and chromatin organization were found in adapted cells. Target metabolites and reactive oxygen species levels were quantified to associate functional outcomes with the proteome study. Remarkably, we also showed that adapted cells tolerate an array of diverse conditions, including anoxia, salt and heat stress. Finally, the expression patterns of genes encoding selected differentially expressed proteins were investigated in potato plants subjected to either drought or salt stress. Collectively, our findings reveal the complex cellular strategies of osmotic stress adaptation, identifying new fundamental genes that could enhance potato resilience.
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Affiliation(s)
- Elisa Cappetta
- Department of PharmacyUniversity of SalernoFiscianoItaly
| | - Carmine Del Regno
- Department of PharmacyUniversity of SalernoFiscianoItaly
- SAFE—School of Agricultural, Forest, Food, and Environmental SciencesUniversity of BasilicataPotenzaItaly
| | - Sara Ceccacci
- Department of PharmacyUniversity of SalernoFiscianoItaly
- Proteomics Platform NeckerUniversité Paris Cité‐Structure Fédérative de Recherche NeckerParisFrance
| | - Maria Chiara Monti
- Department of PharmacyUniversity of SalernoFiscianoItaly
- Department of PharmacyUniversity of Naples ‘Federico II’NaplesItaly
| | - Lucio Spinelli
- Department of PharmacyUniversity of Naples ‘Federico II’NaplesItaly
| | - Marisa Conte
- Department of PharmacyUniversity of SalernoFiscianoItaly
| | - Chiara D'Anna
- Department of PharmacyUniversity of SalernoFiscianoItaly
| | | | | | - Antonello Costa
- National Research Council of Italy, Institute of Biosciences and BioResources, Research Division Portici (CNR‐IBBR)PorticiNaplesItaly
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19
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La Loggia O, Antunes DF, Aubin-Horth N, Taborsky B. Social Complexity During Early Development has Long-Term Effects on Neuroplasticity in the Social Decision-Making Network. Mol Ecol 2025; 34:e17738. [PMID: 40116137 DOI: 10.1111/mec.17738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 03/07/2025] [Accepted: 03/10/2025] [Indexed: 03/23/2025]
Abstract
In social species, early social experience shapes the development of appropriate social behaviours during conspecific interactions referred to as social competence. However, the underlying neuronal mechanisms responsible for the acquisition of social competence are largely unknown. A key candidate to influence social competence is neuroplasticity, which functions to restructure neural networks in response to novel experiences or alterations of the environment. One important mediator of this restructuring is the neurotrophin BDNF, which is well conserved among vertebrates. We studied the highly social fish Neolamprologus pulcher, in which the impact of early social experience on social competence has been previously shown. We investigated experimentally how variation in the early social environment impacts markers of neuroplasticity by analysing the relative expression of the bdnf gene and its receptors p75NTR and TrkB across nodes of the social decision-making network. In fish raised in larger groups, bdnf and TrkB were upregulated in the anterior tuberal nucleus, compared to fish raised in smaller groups, while TrkB was downregulated and bdnf was upregulated in the lateral part of the dorsal telencephalon. In the preoptic area (POA), all three genes were upregulated in fish raised in large groups, suggesting that early social experiences might lead to changes of the neuronal connectivity in the POA. Our results highlight the importance of early social experience in programming the constitutive expression of neuroplasticity markers, suggesting that the effects of early social experience on social competence might be due to changes in neuroplasticity.
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Affiliation(s)
- Océane La Loggia
- Institute for Ecology and Evolution, Behavioural Ecology Division, University of Bern, Bern, Switzerland
| | - Diogo F Antunes
- Institute for Ecology and Evolution, Behavioural Ecology Division, University of Bern, Bern, Switzerland
| | - Nadia Aubin-Horth
- Département de Biologie and Institut de Biologie Intégrative et Des Systèmes, Université Laval, Quebec, Canada
| | - Barbara Taborsky
- Institute for Ecology and Evolution, Behavioural Ecology Division, University of Bern, Bern, Switzerland
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20
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Ali MY, Namini CK, Clark JM, Pittendrigh BR, Lee SH, Yoon KS. Impacts of short-term ivermectin exposures on fruit flies. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2025; 210:106391. [PMID: 40262871 DOI: 10.1016/j.pestbp.2025.106391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2024] [Revised: 03/20/2025] [Accepted: 03/23/2025] [Indexed: 04/24/2025]
Abstract
A short-term ivermectin (IVM) exposure method was newly established to demonstrate effects of sublethal concentrations of IVM on the wild-type fruit fly, Drosophila melanogaster. Using a conventional glass-vial contact approach, exposures to IVM (0.01 to 1000 ppm) for 12 h durations or less were selected to assess the downstream impacts of short-term IVM exposures (STIEs) on fruit flies. Under these conditions, all female flies produced significantly higher levels of reactive oxygen species and malondialdehydes in their ovaries. Additionally, females treated with IVM for 12 h under the STIE conditions exhibited significantly increased levels of DNA damages in their ovaries. Despite the negative impacts described above, the mean percent hatchability values obtained from the eggs oviposited by the IVM-exposed females were not statistically different when compared to the hatchability of the unexposed females. Two concentrations (1 and 10 ppm) of IVM were selected to determine transgenerational effects following short-term IVM exposures. F1, F2 and F8 flies exposed to IVM showed significantly delayed developments (2.5-3.2, 2.5-3.0, and 0.9-1.3 days delayed, respectively). F5, F11 and F17 females showed significantly delayed IVM-induced sluggish behaviors in the presence of lethal IVM (1 %, w/v). F18 females transgenerationally exposed to 1 ppm IVM exhibited significantly increased levels of Mrp1 (8.7-fold) and Cyp6g2 (5.9-fold) transcripts compared to unexposed flies. Comparatively, F18 females transgenerationally exposed to 10 ppm IVM showed significantly increased levels of Cyp9f2 (2.6-fold) transcripts. Current study clearly demonstrated the effects of sublethal IVM on parent and filial generations of fruit flies, providing an important step toward understanding development of IVM resistance under the STIE conditions.
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Affiliation(s)
- M Yusuf Ali
- Department of Biological Sciences, Southern Illinois University, Edwardsville, IL 62026, USA
| | - Carl K Namini
- Department of Environmental Sciences, Southern Illinois University, Edwardsville, IL 62026, USA
| | - John M Clark
- Department of Veterinary and Animal Sciences, University of Massachusetts, Amherst, MA 01003, USA
| | | | - Si H Lee
- Department of Agricultural Biotechnology, Seoul National University, Republic of Korea
| | - Kyong S Yoon
- Department of Environmental Sciences, Southern Illinois University, Edwardsville, IL 62026, USA.
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21
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Raymond MJ, Cherubino MA, Vieira WA, Manon S, McCusker CD. Neural regulation of H3K27me3 during the induction of patterning competency in regenerating Axolotl limb cells. Commun Biol 2025; 8:659. [PMID: 40275079 DOI: 10.1038/s42003-025-08084-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 04/14/2025] [Indexed: 04/26/2025] Open
Abstract
Limb regeneration in the Mexican axolotl relies on the dedifferentiation of mature limb cells into blastema cells, which gain the ability to respond to patterning signals that guide tissue regeneration. While limb nerves are essential to make the blastema cells competent to pattern, the mechanisms remain unclear due to the complex and overlapping signals in amputated limbs. To overcome this challenge, we developed the Competency Accessory Limb Model (CALM), a simplified limb regeneration assay to study the induction and maintenance of patterning competency. Using CALM, here we show specific temporal windows during which cells acquire competency and associate this state with distinct H3K27me3 chromatin signatures. Furthermore, a combination of FGF and BMP signaling is sufficient to induce patterning competency in limb wound cells, and the ErBB signaling pathway is a downstream epigenetic target of these signals. These findings offer new insights into the molecular regulation of regenerative patterning.
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Affiliation(s)
- Michael J Raymond
- College of Science and Mathematics, Department of Biology, University of Massachusetts Boston, 100 Morrissey Blvd, Boston, MA, 02125, USA
| | - Matthew A Cherubino
- College of Science and Mathematics, Department of Biology, University of Massachusetts Boston, 100 Morrissey Blvd, Boston, MA, 02125, USA
| | - Warren A Vieira
- College of Science and Mathematics, Department of Biology, University of Massachusetts Boston, 100 Morrissey Blvd, Boston, MA, 02125, USA
| | - Sheyla Manon
- College of Science and Mathematics, Department of Biology, University of Massachusetts Boston, 100 Morrissey Blvd, Boston, MA, 02125, USA
| | - Catherine D McCusker
- College of Science and Mathematics, Department of Biology, University of Massachusetts Boston, 100 Morrissey Blvd, Boston, MA, 02125, USA.
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22
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Bustin SA, Ruijter JM, van den Hoff MJB, Kubista M, Pfaffl MW, Shipley GL, Tran N, Rödiger S, Untergasser A, Mueller R, Nolan T, Milavec M, Burns MJ, Huggett JF, Vandesompele J, Wittwer CT. MIQE 2.0: Revision of the Minimum Information for Publication of Quantitative Real-Time PCR Experiments Guidelines. Clin Chem 2025:hvaf043. [PMID: 40272429 DOI: 10.1093/clinchem/hvaf043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Accepted: 03/10/2025] [Indexed: 04/25/2025]
Abstract
BACKGROUND In 2009, the Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) guidelines established standards for the design, execution, and reporting of quantitative PCR (qPCR) in research. The expansion of qPCR into numerous new domains has driven the development of new reagents, methods, consumables, and instruments, requiring revisions to best practices that are tailored to the evolving complexities of contemporary qPCR applications. CONTENT Transparent, clear, and comprehensive description and reporting of all experimental details are necessary to ensure the repeatability and reproducibility of qPCR results. These revised MIQE guidelines reflect recent advances in qPCR technology, offering clear recommendations for sample handling, assay design, and validation, along with guidance on qPCR data analysis. Instrument manufacturers are encouraged to enable the export of raw data to facilitate thorough analyses and re-evaluation by manuscript reviewers and interested researchers. The guidelines emphasize that quantification cycle (Cq) values should be converted into efficiency-corrected target quantities and reported with prediction intervals, along with detection limits and dynamic ranges for each target, based on the chosen quantification method. Additionally, best practices for normalization and quality control are outlined and reporting requirements have been clarified and streamlined. The aim is to encourage researchers to provide all necessary information without undue burden, thereby promoting more rigorous and reproducible qPCR research. SUMMARY Building on the collaborative efforts of an international team of researchers, we present updates, simplifications, and new recommendations to the original MIQE guidelines, designed to maintain their relevance and applicability in the context of emerging technologies and evolving qPCR applications.
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Affiliation(s)
- Stephen A Bustin
- Medical Technology Research Centre, Faculty of Health, Education, Medicine & Social Care, Anglia Ruskin University, Chelmsford, Essex, United Kingdom
| | - Jan M Ruijter
- Department Medical Biology, AmsterdamUMC, Location AMC, Amsterdam, the Netherlands
| | | | - Mikael Kubista
- Precision BioAnalytics AB, Institute of Biotechnology of the Czech Academy of Sciences, Vestec, Czech Republic
| | - Michael W Pfaffl
- Animal Physiology & Immunology, School of Life Sciences, Technical University of Munich, Munich, Germany
| | | | - Nham Tran
- School of Biomedical Engineering, University of Technology, Sydney, Australia
| | - Stefan Rödiger
- Brandenburg University of Technology Cottbus-Senftenberg, Senfterberg, Germany
| | - Andreas Untergasser
- Zentrum für Molekulare Biologie, University of Heidelberg, Heidelberg, Germany
| | | | - Tania Nolan
- The GeneTeam, Bury St. Edmunds, Suffolk, United Kingdom
| | - Mojca Milavec
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia
| | - Malcolm J Burns
- Biological Metrology, National Measurement Laboratory (NML), LGC, Teddington, Middlesex, United Kingdom
| | - Jim F Huggett
- Biological Metrology, National Measurement Laboratory (NML), LGC, Teddington, Middlesex, United Kingdom
| | - Jo Vandesompele
- Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
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23
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Auwercx J, Neve B, Vanlaeys A, Fourgeaud M, Bourrin-Reynard I, Souidi M, Brassart-Pasco S, Hague F, Guenin S, Duchene B, Gutierrez L, Destaing O, Dhennin-Duthille I, Van Seuningen I, Jonckheere N, Gautier M. The kinase domain of TRPM7 interacts with PAK1 and regulates pancreatic cancer cell epithelial-to-mesenchymal transition. Cell Death Dis 2025; 16:335. [PMID: 40274768 DOI: 10.1038/s41419-025-07665-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2024] [Revised: 04/07/2025] [Accepted: 04/11/2025] [Indexed: 04/26/2025]
Abstract
Pancreatic ductal adenocarcinoma (PDAC) is the main and the deadliest form of pancreatic cancer. This is a major problem of public health since it will become the second leading cause of death by cancer in the next few years, mainly due to the lack of efficient therapies. Transient Receptor Potential Cation Channel Subfamily M Member 7 (TRPM7) protein, a cation channel fused with a serine/threonine kinase domain is overexpressed in PDAC and associated with a low survival. In this work, we aim to study the role of kinase domain on pancreatic cell fates by using a model of kinase domain deletion by CRISPR-Cas9. PANC-1 and MIA PaCa-2 PDAC cell lines were used and kinase domain was deleted by CRISPR-Cas9 strategy. Kinase domain deletion (ΔK) was validated by RT-qPCR and western blots. The effect of kinase domain deletion on channel function was studied by patch-clamp and Mn2+-quenching. The cell phenotype was studied by MTT and cell migration/invasion assays. Finally, the role of kinase domain was studied in vivo in xenografted mice. Here we show that TRPM7 kinase domain is required to maintain a mesenchymal phenotype in PDAC cells. We also demonstrated that TRPM7 and PAK1 interact in the same protein complexes. Moreover, TRPM7 kinase domain is required for carcinogenesis and cancer cell dissemination in vivo. Intriguingly, the role of TRPM7 kinase is cell specific and may depend on the KRAS oncogene mutation status. In conclusion, TRPM7 kinase domain is required to maintain a mesenchymal and aggressive phenotype in PDAC cells, and it could be a promising target against PDAC.
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Affiliation(s)
- Julie Auwercx
- Université de Picardie Jules Verne, UR-UPJV 4667, Amiens, France
| | - Bernadette Neve
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277-CANTHER-Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France
| | - Alison Vanlaeys
- Université de Picardie Jules Verne, UR-UPJV 4667, Amiens, France
| | | | - Ingrid Bourrin-Reynard
- Institute for Advanced Biosciences, University Grenoble Alpes, INSERM U1209, CNRS UMR5309, site santé, Allée des Alpes, Grenoble, France
| | - Mouloud Souidi
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277-CANTHER-Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France
| | | | - Frédéric Hague
- Université de Picardie Jules Verne, UR-UPJV 4667, Amiens, France
| | - Stéphanie Guenin
- Université de Picardie Jules Verne, Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), Amiens, France
| | - Belinda Duchene
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277-CANTHER-Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France
| | - Laurent Gutierrez
- Université de Picardie Jules Verne, Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), Amiens, France
| | - Olivier Destaing
- Institute for Advanced Biosciences, University Grenoble Alpes, INSERM U1209, CNRS UMR5309, site santé, Allée des Alpes, Grenoble, France
| | | | - Isabelle Van Seuningen
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277-CANTHER-Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France
| | - Nicolas Jonckheere
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277-CANTHER-Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France
| | - Mathieu Gautier
- Université de Picardie Jules Verne, UR-UPJV 4667, Amiens, France.
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24
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Suriyasak C, Kawaguchi R, Matsumoto R, Sawada Y, Nong HT, Hamaoka N, Ishibashi Y. Adaptive memory induced by heat stress during grain filling enhances subsequent thermotolerance in rice (Oryza sativa L.). Sci Rep 2025; 15:14135. [PMID: 40269183 DOI: 10.1038/s41598-025-99146-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2025] [Accepted: 04/17/2025] [Indexed: 04/25/2025] Open
Abstract
Rice grain chalkiness occurs when grains fill under heat stress, greatly reducing grain quality. But the effects of heat stress during grain filling on the subsequent development and adaptive traits remain to be elucidated. Here, we evaluated the effects of heat stress during parental grain filling on the thermotolerance of subsequent plants grown under heat stress after anthesis. Subsequent plants were grown from control (25 °C) and heat-exposed (30 °C) parental seeds under natural conditions until anthesis. Then plants were divided into three treatment groups-control [parental plants] - control [subsequent plants] (CC, 25 °C), control-heat (CH, 30 °C), and heat-heat (HH, 30 °C). Plants grown from heat-stressed seeds had thicker and shorter flag leaves, which delayed leaf senescence and improved photosynthesis under heat stress. HH plants also had significantly less chalkiness than those of CH plants. DNA methylation analysis revealed that heat stress during grain filling significantly hypomethylated promoters of starch biosynthesis genes and hypermethylated those of α-amylase genes. Consequently, HH plants had significantly higher expression of starch biosynthesis genes and suppressed expression of starch-degrading α-amylase genes than CH plants under heat stress. We propose that heat stress during grain filling induces adaptive transgenerational memory that allows subsequent plants to better cope with heat stress.
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Affiliation(s)
- Chetphilin Suriyasak
- Faculty of Agriculture, Kyushu University, Fukuoka, 819-0395, Japan
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
| | - Ryosuke Kawaguchi
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
| | - Ryo Matsumoto
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
| | - Yuta Sawada
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
| | - Hue Thi Nong
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
- Faculty of Biotechnology, Vietnam National University of Agriculture, Hanoi, 131000, Vietnam
| | - Norimitsu Hamaoka
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan
| | - Yushi Ishibashi
- Faculty of Agriculture, Kyushu University, Fukuoka, 819-0395, Japan.
- Graduate School of Bioresource and Environmental Sciences, Kyushu University, Fukuoka, 819-0395, Japan.
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25
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Papadopoulos DK, Michaelidis B, Giantsis IA. Cell death and antioxidant responses in Mytilus galloprovincialis under heat stress: Evidence of genetic loci potentially associated with thermal resilience. PLoS One 2025; 20:e0321682. [PMID: 40267109 PMCID: PMC12017574 DOI: 10.1371/journal.pone.0321682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Accepted: 03/10/2025] [Indexed: 04/25/2025] Open
Abstract
The global seawater temperature is expected to further rise in the following years. While species have historically adapted to climatic variations, the current pace of climate change may exceed their ability to adapt. The abnormally increased seawater temperatures occasionally lead to high mortalities of marine bivalve mollusks, threatening the productivity of aquaculture and the sustainability of wild populations. This study investigates the antioxidant and cell death mechanisms of the Mediterranean mussel Mytilus galloprovincialis during a 25-day exposure to temperatures of 24°C, 26°C, and 28°C, by analyzing the transcription of key genes and assessing the oxidative damage on days 1, 3, 12, and 25. In addition, individuals resilient (survived at 28°C until day 30) and susceptible (died early at 26°C and 28°C) to thermal stress were collected to investigate potential polymorphisms in associated genes. The results showed increased transcription of antioxidant genes at higher temperatures. Elevated pro-apoptotic indices were initially observed at 26°C and a higher mortality than at 28°C. However, final mortality was much higher at 28°C. At 26°C, mussels exhibited the highest oxidative damage and pro-apoptotic indices after 25 days. At 28°C, although oxidative damage occurred after 24 hours, survivors maintained a prolonged activated antioxidant defense and increased lc3b transcription, which likely contributed to the observed reduction of pro-apoptotic and oxidative damage metrics on day 25, compared to 26°C. Further, the coding sequences of catalase, intracellular Cu-Zn superoxide dismutase (Cu-Zn sod), and fas-associated protein with death domain (fadd) from heat-resilient and heat-susceptible mussels were analyzed. Based on statistical correlation of nucleotide and genotype frequencies with resilience phenotypes, two novel single nucleotide polymorphisms (SNPs) in Cu-Zn sod and one in fadd were detected, potentially correlating with thermal stress resilience. These findings offer valuable insights into the physiological and genetic adaptations of M. galloprovincialis to rising temperatures and highlight loci potentially linking to thermal resilience.
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Affiliation(s)
- Dimitrios K. Papadopoulos
- Department of Zoology, Faculty of Sciences, School of Biology, Laboratory of Animal Physiology, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Basile Michaelidis
- Department of Zoology, Faculty of Sciences, School of Biology, Laboratory of Animal Physiology, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Ioannis A. Giantsis
- Faculty of Agriculture, Forestry and Natural Environment, Laboratory of Ichthyology & Fisheries, Aristotle University of Thessaloniki, Thessaloniki, Greece
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26
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Amacker N, Gao Z, Jousset ALC, Geisen S, Kowalchuk GA. Identity and timing of protist inoculation affect plant performance largely irrespective of changes in the rhizosphere microbial community. Appl Environ Microbiol 2025; 91:e0024025. [PMID: 40162835 PMCID: PMC12016509 DOI: 10.1128/aem.00240-25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2025] [Accepted: 02/25/2025] [Indexed: 04/02/2025] Open
Abstract
Bacterivorous soil protists can have positive impacts on plant performance, making them attractive targets for novel strategies to improve crop production. However, we generally lack the knowledge required to make informed choices regarding the protist species to be used or the optimal conditions for such amendments. Here, we examined how identity, diversity, and timing of inoculation of well-described protists impacted plant development and rhizosphere microbiome assembly. We first studied the impact of individual inoculation of six well-characterized protists on lettuce growth, with Cercomonas sp. S24D2 emerging as the strain with the largest impact on plant growth. In a second step, we created a three-protist species mixture inoculant by adding two protist species (Acanthamoeba sp. C13D2 and a heterolobosean isolate S18D10), based on differences in their feeding patterns. We then inoculated Cercomonas sp. either individually or in the protist mixture to lettuce plants 1 week before, simultaneously with, or 1 week after seedling transfer. We monitored plant growth and nutrient content, as well as impacts on the resident soil and rhizosphere microbiome composition. We found that early protist inoculation provided the greatest increase in aboveground biomass compared to the non-inoculated control. Single- and mixed-species inoculations had similar impacts on plant development and only minor impacts on prokaryotic community composition. While early inoculation seems to be the most promising timing for eliciting the positive effects of protist amendments, further, more systematic studies will be necessary to determine the conditions and ecological interactions that yield consistent and predictable improvements in plant performance. IMPORTANCE The application of microorganisms, including bacterivorous soil protists, has been increasingly suggested as a sustainable agricultural approach. While positive impacts of the presence of predatory protists have been generally reported, the effects of the selected species and amendment conditions are largely unknown. Here, we examined how identity, diversity, and timing of inoculation of well-described protists impacted plant development and rhizosphere microbiome assembly. One species emerged as the one having the strongest impact in our specific system. This result highlights the importance of species selection for optimal outcome, but also suggests a huge potential in the barely investigated protist diversity for targeted application. Furthermore, the application of the inoculants before plant transfer showed the strongest effects on plants, providing some useful and new insights on the optimal time for such amendments.
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Affiliation(s)
- Nathalie Amacker
- Ecology and Biodiversity Group, Institute of Environmental Biology, University of Utrecht, Utrecht, the Netherlands
| | - Zhilei Gao
- Ecology and Biodiversity Group, Institute of Environmental Biology, University of Utrecht, Utrecht, the Netherlands
- ECOstyle, Oosterwolde, the Netherlands
| | - Alexandre L. C. Jousset
- Ecology and Biodiversity Group, Institute of Environmental Biology, University of Utrecht, Utrecht, the Netherlands
- Blossom Microbial Technologies BV, Utrecht, the Netherlands
| | - Stefan Geisen
- Laboratory of Nematology, Wageningen University & Research, Wageningen, the Netherlands
| | - George A. Kowalchuk
- Ecology and Biodiversity Group, Institute of Environmental Biology, University of Utrecht, Utrecht, the Netherlands
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Hu XQ, Song R, Dasgupta C, Twum-Barimah S, Liu T, Ahmed A, Hanson SF, Zhang L, Blood AB. MicroRNA-210 Mediates Hypoxic Pulmonary Hypertension in the Newborn Lamb. Hypertension 2025. [PMID: 40265266 DOI: 10.1161/hypertensionaha.124.23061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Accepted: 04/07/2025] [Indexed: 04/24/2025]
Abstract
BACKGROUND Pulmonary hypertension of the newborn is a life-threatening disorder characterized by elevated pulmonary vascular resistance due to maladaptation of the pulmonary circulation after birth. The etiology and mechanisms underlying pulmonary hypertension of the newborn remain unclear, hindering the development of effective treatment. We hypothesize that perinatal chronic hypoxia upregulates microRNA-210, which is essential for suppression of pulmonary arterial spontaneous transient outward currents (STOCs), resulting in pulmonary hypertension of the newborn. METHODS We tested this hypothesis in a large animal model of pregnant sheep and newborn lambs exposed to chronic hypoxia by comparing loss- versus gain-of-function of microRNA-210. RESULTS Chronic perinatal hypoxia increases pulmonary vascular resistance and pulmonary arterial pressure in newborn lambs. The effect was mainly mediated by hypoxia after birth in the newborn. Mechanistically, we showed a significant decrease in microRNA-210 in pulmonary arteries after birth, but newborn hypoxia abolished this birth-induced reduction. We found that microRNA-210 mimic suppressed STOCs in newborn pulmonary arteries, and knockdown of microRNA-210 by microRNA-210-LNA prevented the hypoxia-induced reduction of pulmonary arterial STOCs. In vivo loss-of-function and gain-of-function experiments reveal that microRNA-210 is essential in the hypoxia-induced suppression of pulmonary arterial STOCs, increased pulmonary vascular resistance, and pulmonary hypertension in newborn lambs. Mechanistically, microRNA-210 suppressed pulmonary arterial STOCs via downregulation of iron-sulfur cluster assembly enzyme and large-conductance Ca2+-activated K+ channels. CONCLUSIONS We provide explicit evidence that neonatal hypoxia increases microRNA-210 expression, which is essential for suppression of STOCs, resulting in pulmonary hypertension in newborn lambs. Our study reveals new insights into the mechanisms and clinically meaningful targets for treatment of pulmonary hypertension of the newborn.
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Affiliation(s)
- Xiang-Qun Hu
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Rui Song
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Chiranjib Dasgupta
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Stephen Twum-Barimah
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Taiming Liu
- Division of Neonatology, Department of Pediatrics, Loma Linda University School of Medicine, CA. (T.L., A.B.B.)
| | - Abu Ahmed
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Shawn F Hanson
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Lubo Zhang
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
| | - Arlin B Blood
- Lawrence D. Longo, MD Center for Perinatal Biology, Department of Basic Sciences, Loma Linda University School of Medicine, CA. (X.-Q.H., R.S., C.D., S.T.-B., A.A., S.F.H., L.Z., A.B.B.)
- Division of Neonatology, Department of Pediatrics, Loma Linda University School of Medicine, CA. (T.L., A.B.B.)
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Awoyomi OF, Gorospe CM, Das B, Mishra P, Sharma S, Diachenko O, Nilsson AK, Tran P, Wanrooij PH, Chabes A. RRM2B deficiency causes dATP and dGTP depletion through enhanced degradation and slower synthesis. Proc Natl Acad Sci U S A 2025; 122:e2503531122. [PMID: 40244665 DOI: 10.1073/pnas.2503531122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2025] [Accepted: 03/21/2025] [Indexed: 04/18/2025] Open
Abstract
Mitochondrial DNA (mtDNA) replication requires a steady supply of deoxyribonucleotides (dNTPs), synthesized de novo by ribonucleotide reductase (RNR). In nondividing cells, RNR consists of RRM1 and RRM2B subunits. Mutations in RRM2B cause mtDNA depletion syndrome, linked to muscle weakness, neurological decline, and early mortality. The impact of RRM2B deficiency on dNTP pools in nondividing tissues remains unclear. Using a mouse knockout model, we demonstrate that RRM2B deficiency selectively depletes dATP and dGTP, while dCTP and dTTP levels remain stable or increase. This depletion pattern resembles the effects of hydroxyurea, an inhibitor that reduces overall RNR activity. Mechanistically, we propose that the depletion of dATP and dGTP arises from their preferred degradation by the dNTPase SAMHD1 and the lower production rate of dATP by RNR. Identifying dATP and dGTP depletion as a hallmark of RRM2B deficiency provides insights for developing nucleoside bypass therapies to alleviate the effects of RRM2B mutations.
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Affiliation(s)
| | - Choco Michael Gorospe
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Biswajit Das
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Pradeep Mishra
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Sushma Sharma
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Olena Diachenko
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Anna Karin Nilsson
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Phong Tran
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Paulina H Wanrooij
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
| | - Andrei Chabes
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå SE 90187, Sweden
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Hong ZH, Zhu L, Gao LL, Zhu Z, Su T, Krall L, Wu XN, Bock R, Wu GZ. Chloroplast precursor protein preClpD overaccumulation triggers multilevel reprogramming of gene expression and a heat shock-like response. Nat Commun 2025; 16:3777. [PMID: 40263324 PMCID: PMC12015282 DOI: 10.1038/s41467-025-59043-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Accepted: 04/07/2025] [Indexed: 04/24/2025] Open
Abstract
Thousands of nucleus-encoded chloroplast proteins are synthesized as precursors on cytosolic ribosomes and posttranslationally imported into chloroplasts. Cytosolic accumulation of unfolded chloroplast precursor proteins (e.g., under stress conditions) is hazardous to the cell. The global cellular responses and regulatory pathways involved in triggering appropriate responses are largely unknown. Here, by inducible and constitutive overexpression of ClpD-GFP to result in precursor protein overaccumulation, we present a comprehensive picture of multilevel reprogramming of gene expression in response to chloroplast precursor overaccumulation stress (cPOS), reveal a critical role of translational activation in the expression of cytosolic chaperones (heat-shock proteins, HSPs), and demonstrate that chloroplast-derived reactive oxygen species act as retrograde signal for the transcriptional activation of small HSPs. Furthermore, we reveal an important role of the chaperone ClpB1/HOT1 in maintaining cellular proteostasis upon cPOS. Together, our observations uncover a cytosolic heat shock-like response to cPOS and provide insights into the underlying molecular mechanisms.
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Affiliation(s)
- Zheng-Hui Hong
- Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Liyu Zhu
- Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Lin-Lin Gao
- Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Zhe Zhu
- School of Life Sciences, Yunnan University, Kunming, Yunnan Province, China
| | - Tong Su
- Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Leonard Krall
- School of Life Sciences, Yunnan University, Kunming, Yunnan Province, China
| | - Xu-Na Wu
- School of Life Sciences, Yunnan University, Kunming, Yunnan Province, China
| | - Ralph Bock
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany
| | - Guo-Zhang Wu
- Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
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Harris S, Kodila Z, Salberg S, Sgro M, Vlassopoulos E, Li CN, Smith MJ, Shultz SR, Yamakawa GR, Noel M, Mychasiuk R. Maternal oxytocin administration mitigates nociceptive, social, and epigenetic impairments in adolescent offspring exposed to perinatal trauma. Neurotherapeutics 2025:e00598. [PMID: 40268660 DOI: 10.1016/j.neurot.2025.e00598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2025] [Revised: 04/07/2025] [Accepted: 04/09/2025] [Indexed: 04/25/2025] Open
Abstract
Adverse childhood experiences (ACEs) alter brain development, leading to vulnerability for chronic pain, mental health disorders, and suicidality. These effects often emerge during adolescence. Importantly, ACEs can occur prenatally, including when exposed to in utero intimate partner violence (IPV) or postnatally as maternal neglect. Maternal social support has demonstrated promise in the mitigation of ACE-related deficits. Oxytocin, which has a role in social-bonding and stress regulation, serves as a suitable surrogate for social support in preclinical studies. Therefore, we aimed to explore the effects of oxytocin on alleviating social deficits, nociception, and epigenetic changes resulting from models that aimed to mimic the stress normally induced following exposure to two ACEs: IPV in utero and maternal neglect. During pregnancy, dams were randomly assigned to experience the model of IPV or a sham insult. Following birth, offspring from the IPV group underwent 10 days of maternal separation. Dams received three days of oxytocin therapy while nursing. In adolescence, half of the offspring underwent a plantar surgery to induce pain. Overall, in adolescence, rats exposed to the ACEs exhibited increased nociceptive sensitivity and aberrant social interactions, particularly among males, further suggesting that ACEs can increase an individual's risk for chronic pain. The ACEs changed gene expression related to social behaviour and neuroplasticity. Maternal oxytocin normalized pain, social, and gene changes, while oxytocin levels in offspring correlated with nociceptive sensitivity. Although ACEs have enduring consequences, the outcomes are modifiable, and oxytocin may be a robust and implementable therapeutic capable of attenuating early adversity.
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Affiliation(s)
- Sydney Harris
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Zoe Kodila
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Sabrina Salberg
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Marissa Sgro
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Elaina Vlassopoulos
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Crystal N Li
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Madeleine J Smith
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Sandy R Shultz
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia; Centre for Trauma and Mental Health Research, Vancouver Island University, Nanaimo, B.C., Canada
| | - Glenn R Yamakawa
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia
| | - Melanie Noel
- Department of Psychology, Alberta Children's Hospital, Hotchkiss Brain Institute, University of Calgary, AB, Canada
| | - Richelle Mychasiuk
- Department of Neuroscience, School of Translational Medicine, Monash University, Melbourne, Victoria, Australia.
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31
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Gupta H, Raghubansi A, Bharat, Sharma K, Zutshi K, Panchal P, Bhattacharya S, Ranjan P, Puri G, Saini N. Targeting GSK3β and signaling pathways in breast cancer: role of individual members of miR- 23/24/27 cluster. BMC Cancer 2025; 25:737. [PMID: 40254586 PMCID: PMC12010543 DOI: 10.1186/s12885-025-14045-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2024] [Accepted: 03/31/2025] [Indexed: 04/22/2025] Open
Abstract
BACKGROUND The high mortality rate of breast cancer and the difficulties associated with therapeutic resistance, especially in cases where targeted treatments are unavailable, make it a serious threat to women's health. This study examines the relationship between three mature microRNAs (miRNAs) that are clustered together, namely miR- 23a, miR- 27a, and miR- 24-2, as well as their potential correlation with breast cancer. METHODS We identified common gene targets of miR- 23a, miR- 27a, and miR- 24-2 using computational analysis. We also checked for the levels of miR- 23a, miR- 27a, and miR- 24-2 in 26 breast tumor tissues (with their matched control) as well as MCF7 and MDA-MB- 231 cell lines using qRT-PCR. Dual-luciferase reporter assay was conducted to validate the binding site of the microRNAs in their target gene. Western blot was performed to study the expression of various breast cancer related genes in the presence of the three microRNAs. In addition, the effect of microRNAs in cancer cell metastasis and cell division was carried out using invasion and cell cycle assay. RESULTS Computational analysis identified key genes, including GSK3β, NCOA1 and SP1, which are functionally linked to tumor progression and various other malignancies. All three microRNAs were found to be significantly downregulated in the breast cancer tissue samples in comparison to their respective controls. Kaplan-Meier plot analysis revealed that the expression levels of these genes and associated microRNAs correlates with breast cancer patient survival rates. Reduced SP1 and NCOA1 levels predicted a worse prognosis, but elevated levels of GSK3β were linked with decreased survival. Moreover, miR- 23a and miR- 24-2 specifically target GSK3β, potentially disrupting the Wnt/β-catenin pathway involved in breast cancer development. Functional tests showed that miR- 23a, miR- 27a and miR- 24-2 affect expression of EMT related genes, influencing cell invasion and migration, impacting ERK signaling and EMT, critical in the spread of breast cancer. CONCLUSION This study unlocks the potential of targeting the microRNA cluster as a therapeutic approach and emphasizes the complex regulatory roles of each individual members of the miR- 23a/27a/24-2 cluster in the pathogenesis of breast cancer.
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Affiliation(s)
- Harshi Gupta
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
| | - Anushka Raghubansi
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
| | - Bharat
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
- Academy of Scientific & Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Kritika Sharma
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
| | - Krittika Zutshi
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
| | - Partibha Panchal
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
- Academy of Scientific & Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Sushant Bhattacharya
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India
- Academy of Scientific & Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Piyush Ranjan
- Department of Surgical Disciplines, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, 110029, India
| | - Gopal Puri
- Department of Surgical Disciplines, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, 110029, India
| | - Neeru Saini
- Functional Genomics Unit, CSIR-Institute of Genomics and Integrative Biology (IGIB), Mall Road, Delhi, 110007, India.
- Academy of Scientific & Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Quiroz-Olguín G, Gutiérrez-Salmeán G, Borja-Margno AI, Flores-López A, Guevara-Cruz M, Gómez FE, Serralde-Zúñiga AE. Effects of 3-day fasting on secretory IgA concentration in the saliva and lymphotoxin alpha expression in healthy volunteers: a proof of concept study. NUTR HOSP 2025; 42:131-136. [PMID: 39692241 DOI: 10.20960/nh.05249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2024] Open
Abstract
Introduction Background: animal studies have shown that enteral stimuli play an important role in modulating gut-associated lymphoid tissue thus fasting may exert detrimental effects on such. Objective: the main objectives of this study were 1) to evaluate the effect of 3-day fasting on secretory immunoglobulin A (S-IgA) in parotid saliva and 2) to determine the levels of lymphotoxin (LT) transcription in peripheral blood mononuclear cells (PBMNC) from healthy volunteers as a proxy for studying GALT health. Methods: these adult volunteers had fasted for three days as part of a cultural ritual. Eleven volunteers (seven men and four women) with a median age of 43 (40-56) were included. Parotid saliva and blood samples were collected on day 0 (no fasting) and three days after fasting. Parotid saliva was obtained using a modified on-Crittenden device, and S-IgA was quantified using ELISA. Total RNA was isolated from peripheral blood mononuclear cells, and the level of lymphotoxin (LT) mRNA expression was determined by RT-PCR. Lipopolysaccharide (LPS), IL-10 (interleukin), tumor necrosis factor (TNF)α, body composition and other metabolic indicators were measured. Results: median BMI was 27.3 kg/m2 (24.9-29.1). After 3 days of fasting, there were no significant differences in S-IgA concentrations (p = 0.657), LT expression (p = 0.063), LPS (p = 0.182), nor IL-10 (p = 0.110). We found a statistical difference in TNFα levels (13.5 vs 11.3 pg/mL; p = 0.005) between the 0 and 3-day samples; TNFα decreased after fasting. Conclusion: further studies are needed to clarify the role of LT in the production of S-IgA and its relationship with nutritional status and inflammatory factors.
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Affiliation(s)
- Gabriela Quiroz-Olguín
- Clinical Nutrition Service. Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán. Centro de Investigación en Ciencias de la Salud. Faculty of Health Sciences. Universidad Anáhuac
| | | | - Angélica I Borja-Margno
- Department of Nutrition Physiology. Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán
| | - Adriana Flores-López
- Clinical Nutrition Service. Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán
| | - Martha Guevara-Cruz
- Department of Nutrition Physiology. Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán
| | - Francisco Enrique Gómez
- Department of Nutrition Physiology. Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán
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Zhang Z, Ma J, Shi M, Huang J, Xu Z. CIAPIN1 attenuates ferroptosis via regulating PI3K/AKT pathway in LPS-induced podocytes. BMC Nephrol 2025; 26:201. [PMID: 40259237 PMCID: PMC12010576 DOI: 10.1186/s12882-025-04123-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2025] [Accepted: 04/14/2025] [Indexed: 04/23/2025] Open
Abstract
OBJECTIVE Cytokine-induced apoptosis inhibitor 1 (CIAPIN1) is a crucial anti-apoptotic protein; however, its role and associated molecular pathways in ferroptosis remain largely unexplored. This study aimed to investigate the effects of CIAPIN1 on ferroptosis in lipopolysaccharide (LPS)-induced podocytes and the associated underlying phenomenon. METHODS In this study, we recruited 50 sepsis patients (aged 56.63 ± 10.33) with acute kidney injury (AKI), 50 sepsis patients without AKI, and 50 healthy controls. We established an in vitro model of LPS-induced MPC5 podocytes. RT-qPCR and Western blotting were used to evaluate mRNA and protein expression, respectively. RESULTS Serum CIAPIN1 is downregulated in patients with septic AKI and LPS-induced podocytes. CIAPIN1 overexpression (OE-CIAPIN1) attenuated cell proliferation and apoptosis in LPS-induced podocytes. OE-CIAPIN1 elevated phosphorylated phosphoinositide 3-kinase (p-PI3K; p85, Tyr458) and phosphorylated protein kinase B (p-Akt; Ser473) levels in LPS-induced podocytes. OE-CIAPIN1 significantly elevated synaptopodin mRNA levels and remarkably lowered desmin mRNA expression in MPC5 cells. In contrast, treatment with the PI3K/Akt pathway inhibitor, LY294002, reversed synaptopodin and desmin mRNA expression in MPC5 cells. Additionally, OE-CIAPIN1 reduced the malondialdehyde (MDA) content and Fe2 + concentration in the lysate of MPC5 cells, while elevating the MDA content and Fe2 + concentration by LY294002 treatment. Furthermore, OE-CIAPIN1 increased ferroptosis-related proteins, including solute carrier family 7 member 11 (SLC7A11) and glutathione peroxidase 4 (GPX4), in MPC5 cells, which was reversed by LY294002 treatment. CONCLUSION These results suggest that serum CIAPIN1 inhibits LPS-induced ferroptosis in podocytes by regulating the PI3K/AKT signaling pathway.
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Affiliation(s)
- Ziqing Zhang
- Department of Emergency Medicine, Seventh People's Hospital of Shanghai University of Traditional Chinese Medicine, 358 Datong Road, Pudong, Shanghai, 200137, China
| | - Jinmiao Ma
- Department of Emergency Medicine, Seventh People's Hospital of Shanghai University of Traditional Chinese Medicine, 358 Datong Road, Pudong, Shanghai, 200137, China
| | - Minyu Shi
- Department of Emergency Medicine, Seventh People's Hospital of Shanghai University of Traditional Chinese Medicine, 358 Datong Road, Pudong, Shanghai, 200137, China
| | - Jingcong Huang
- Department of Emergency Medicine, Seventh People's Hospital of Shanghai University of Traditional Chinese Medicine, 358 Datong Road, Pudong, Shanghai, 200137, China
| | - Zhenyu Xu
- Department of Emergency Medicine, Seventh People's Hospital of Shanghai University of Traditional Chinese Medicine, 358 Datong Road, Pudong, Shanghai, 200137, China.
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Parsaei S, Yaghoobi H, Beshkar P, Khonakdar Sangdehi HA, Khosravi Farsani MR, Safari O. Zingerone based green synthesized sodium doped zinc oxide nanoparticles eliminate U87 glioblastoma cells by inducing apoptosis. Sci Rep 2025; 15:13516. [PMID: 40251290 PMCID: PMC12008281 DOI: 10.1038/s41598-025-96962-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2024] [Accepted: 04/01/2025] [Indexed: 04/20/2025] Open
Abstract
Grade IV astrocytoma, also referred to as glioblastoma (GBM), is the most common type of glioma, accounting for over 60% of all brain tumors. It is still a fatal illness in spite of years of investigation and does not currently have a treatment. Thus, scientists and medical professionals are constantly trying to understand the molecular processes and heterogeneity of GBM as well as looking for new ways to improve treatment results. Numerous studies have indicated that nanomaterials, and more especially nanoparticles, offer a great deal of potential for killing cancer cells; as a result, they are being considered as a potential alternative cancer treatment. Several studies have demonstrated that ZnO NPs have shown specific cytotoxicity against cancer cells while leaving normal cells unharmed. In this study we aim to synthesize sodium doped zinc oxide NPs using zingerone in an environmentally friendly manner to evaluate their cytotoxic effects on U87 GBM cell line and normal HEK cell line and investigate the occurrence of apoptosis via apoptosis assay by flowcytometry and gene expression study of TP53 and related genes to apoptosis and cell cycle regulation pathways. It was demonstrated that Na-doped ZnO NPs had a significant cytotoxic effect on U87 cells while having significantly less effect on normal HEK cells. Na-doped ZnO NPs eliminated cancerous cells through apoptosis induction and possibly cell cycle regulation via up-regulation of TP53, PTEN, BAX, P21 and down-regulation of Bcl2. The unique physicochemical properties of nanoparticles turn them into fascinating agents to treat GBM. Hence, the necessity of exploring the vast, yet unknown field of nanoparticles potentials cannot be over looked.
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Affiliation(s)
- Saman Parsaei
- Student Research Committee, Shahrekord University of Medical Sciences, Shahrekord, Iran
| | - Hajar Yaghoobi
- Clinical Biochemistry Research Center, Basic Health Science institute, Shahrekord University of Medical Sciences, Shahrekord, Iran.
| | - Pezhman Beshkar
- Cellular and Molecular Research Center, Shahrekord University of Medical Sciences, Shahrekord, Iran
| | | | | | - Omid Safari
- Cancer Research Center, Shahrekord University of Medical Sciences, Shahrekord, Iran
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35
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Harrison LM, Stuart OP, Jennions MD. Winner-loser effects on life history traits. J Evol Biol 2025; 38:530-542. [PMID: 40077851 DOI: 10.1093/jeb/voaf021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2024] [Revised: 12/20/2024] [Accepted: 03/06/2025] [Indexed: 03/14/2025]
Abstract
Ageing of adult males could be accelerated by both high mating/reproductive effort and fighting for mates. Testing the relative importance of these factors is challenging, however, because males that win fights also tend to have more mates. We used a 2 × 2 experimental design to test how a prolonged (9 week) period of either winning or losing fights, and either high or low reproductive effort (manipulating by varying access to females) interacts to affect male ageing and future reproduction allocation in the mosquitofish, Gambusia holbrooki. We measured telomere length and several life-history traits, including mating effort and ejaculates (sperm count and velocity). After 9 weeks, there were significant differences between winners and losers in their mating effort but not in their ejaculates. Males with a higher past reproductive effort (i.e., access to females) had significantly lower current mating effort and grew more slowly. Males with a higher past reproductive effort also had slower swimming sperm, but only if they were smaller than average in body size. Surprisingly, neither males with a higher past reproductive effort nor males that repeatedly lost fights had shorter telomeres. Our findings show that past social dynamics affect how males allocate resources to reproduction and somatic maintenance.
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Affiliation(s)
- Lauren M Harrison
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Acton, Australia
- School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich,United Kingdom
| | - Oliver P Stuart
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Acton, Australia
- School of Biological, Earth and Environmental Sciences, Distillery Fields, North Mall, University College Cork, Cork, Ireland
| | - Michael D Jennions
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Acton, Australia
- Stellenbosch Institute for Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, Stellenbosch, South Africa
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36
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Bubb K, Etich J, Probst K, Parashar T, Schuetter M, Dethloff F, Reincke S, Nolte JL, Krüger M, Schlötzer-Schrehard U, Nüchel J, Demetriades C, Giavalisco P, Riemer J, Brachvogel B. Metabolic rewiring caused by mitochondrial dysfunction promotes mTORC1-dependent skeletal aging. SCIENCE ADVANCES 2025; 11:eads1842. [PMID: 40249823 PMCID: PMC12007575 DOI: 10.1126/sciadv.ads1842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Accepted: 03/14/2025] [Indexed: 04/20/2025]
Abstract
Decline of mitochondrial respiratory chain (mtRC) capacity is a hallmark of mitochondrial diseases. Patients with mtRC dysfunction often present reduced skeletal growth as a sign of premature cartilage degeneration and aging, but how metabolic adaptations contribute to this phenotype is poorly understood. Here we show that, in mice with impaired mtRC in cartilage, reductive/reverse TCA cycle segments are activated to produce metabolite-derived amino acids and stimulate biosynthesis processes by mechanistic target of rapamycin complex 1 (mTORC1) activation during a period of massive skeletal growth and biomass production. However, chronic hyperactivation of mTORC1 suppresses autophagy-mediated organelle recycling and disturbs extracellular matrix secretion to trigger chondrocytes death, which is ameliorated by targeting the reductive metabolism. These findings explain how a primarily beneficial metabolic adaptation response required to counterbalance the loss of mtRC function, eventually translates into profound cell death and cartilage tissue degeneration. The knowledge of these dysregulated key nutrient signaling pathways can be used to target skeletal aging in mitochondrial disease.
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Affiliation(s)
- Kristina Bubb
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Julia Etich
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Kristina Probst
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Tanvi Parashar
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Maximilian Schuetter
- Metabolic Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany
| | - Frederik Dethloff
- Metabolic Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany
| | - Susanna Reincke
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Janica L. Nolte
- Institute of Genetics, University of Cologne, Cologne, Germany
- Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany
| | - Marcus Krüger
- Institute of Genetics, University of Cologne, Cologne, Germany
- Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany
| | - Ursula Schlötzer-Schrehard
- Department of Ophthalmology, University Hospital Erlangen, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Julian Nüchel
- Max Planck Institute for Biology of Ageing (MPI-AGE), Cologne, Germany
| | - Constantinos Demetriades
- Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany
- Max Planck Institute for Biology of Ageing (MPI-AGE), Cologne, Germany
| | - Patrick Giavalisco
- Metabolic Core Facility, Max Planck Institute for Biology of Ageing, Cologne, Germany
| | - Jan Riemer
- Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany
- Institute of Biochemistry, Redox Biochemistry, University of Cologne, Cologne, Germany
| | - Bent Brachvogel
- Department of Pediatrics and Adolescent Medicine, Experimental Neonatology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
- Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany
- Center for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany
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Rostami N, Nikzad A, Shaybani S, Noei H, Ghebleh A, Alidadi M, Abbasi H, Bencherif SA. Engineering Folic Acid-Modified Nanoparticles to Enhance Letrozole's Anticancer Action. Macromol Biosci 2025:e2400558. [PMID: 40249348 DOI: 10.1002/mabi.202400558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2024] [Revised: 02/28/2025] [Indexed: 04/19/2025]
Abstract
The development of biodegradable nanoparticles (NPs) for delivering anticancer drugs, such as letrozole (LTZ), offers a targeted approach for cancer therapy. In this study, we synthesized poly(ε-caprolactone)-co-poly(ethylene glycol) (PCL-co-PEG) and fabricated LTZ-loaded PCL-co-PEG NPs (LTZ-NPs) via emulsion-solvent evaporation. Folic acid (FA), a folate receptor-targeting molecule, was conjugated to the LTZ-loaded NPs (LTZ-FNPs) to enhance treatment efficacy against hormone receptor-positive breast cancer cells. Both NPs and FNPs exhibited a spherical morphology (60-90 nm), with FNPs showing higher drug entrapment efficiency and controlled release. LTZ release was minimal at physiological pH but increased in acidic, cancer-like environments, following the Korsmeyer-Peppas model, indicating a combination of Fickian and non-Fickian diffusion. In cytotoxicity assays, LTZ-FNPs exhibited higher toxicity against MCF-7 cells than LTZ-NPs. Controlled LTZ release altered gene expression, reducing B-cell leukemia/lymphoma 2 protein (Bcl2) and increasing caspase 8 (Casp8), promoting apoptosis. A shift to the SubG1 phase further confirmed enhanced LTZ-FNP-mediated cell death. Furthermore, p53 expression increased, while matrix metalloproteinase 9 (MMP-9) decreased, inhibiting cell invasion. This study introduces a biodegradable system with FA-functionalized, pH-sensitive NPs for the targeted and controlled delivery of LTZ. This approach holds great potential for selective, efficient treatment while minimizing systemic toxicity in breast cancer therapy.
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Affiliation(s)
- Neda Rostami
- Department of Chemical Engineering, Arak University, Arak, 3848177584, Iran
| | - Abuzar Nikzad
- Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ, 08854, USA
| | - Shervin Shaybani
- Department of Chemistry, Wake Forest University, Winston-Salem, NC, 27101, USA
| | - Hadi Noei
- Department of Medical Biology and Genetics, Faculty of Medicine, Istinye University, Istanbul, 34010, Turkey
| | - Aida Ghebleh
- School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan, 8174673461, Iran
| | - Mehdi Alidadi
- Department of Anatomy, School of Medicine, Tehran University of Medical Sciences, Tehran, 1461884513, Iran
| | - Hanie Abbasi
- Department of Medicine, School of Medicine, Tehran University of Medical Sciences, Tehran, 1461884513, Iran
| | - Sidi A Bencherif
- Department of Chemical Engineering, Northeastern University, Boston, MA, 02115, USA
- Polymers, Biopolymers, Surfaces Laboratory (PBS, UMR CNRS 6270), University of Rouen Normandy, Rouen, F-76000, France
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38
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Zhang X, Huang X, Wu Z. Light-induced CsCV triggers chloroplast degradation by destabilizing photosystem proteins in tea plant. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2025; 224:109926. [PMID: 40258317 DOI: 10.1016/j.plaphy.2025.109926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2025] [Revised: 04/02/2025] [Accepted: 04/15/2025] [Indexed: 04/23/2025]
Abstract
Excess light induces chloroplast degradation in plants, leading to decreased photosynthetic efficiency and an albino leaf phenotype. However, the molecular mechanism underlying this process remains unclear, especially in perennial crops like tea plant. This study investigated the effects of relatively strong light (SL, 240 μmol m-2·s-1) on chloroplast ultrastructure and metabolites in the light-sensitive tea germplasm Nanchuan Dachashu (Camellia nanchuanica). Continuous exposure to SL resulted in abnormal chloroplast structure characterized by extensive vacuolation. SL also significantly decreased the levels of chlorophyll (-60.30 %), carotenoids (-88.29 %), free amino acids (-23.97 %), and caffeine (-41.15 %) compared to relatively weak light (WL, 15 μmol m-2·s-1). Transcriptome analysis and RT-qPCR revealed that the chloroplast vesiculation gene CsCV was significantly up-regulated under SL, with promoter analysis showing more light-responsive elements in CsCV compared to another light-responsive gene, CsNBR1. Overexpression of CsCV in Arabidopsis caused stunted growth and accelerated leaf senescence, with the most affected line showing decreases in chlorophyll and carotenoid contents of 24.97 % and 17.39 %, respectively. Conversely, silencing CsCV in tea plants using antisense oligodeoxynucleotides (asODNs) for 3 days increased chlorophyll and carotenoid levels by 15.98 % and 18.35 %, respectively. Bimolecular fluorescence complementation (BiFC) assays and in protein-protein docking simulations demonstrated that CsCV interacts with the photosystem proteins CsLhca1, CsLhcb4, and CsPsaL through its conserved C-terminal region, suggesting CsCV may trigger chloroplast degradation by destabilizing the photosynthetic apparatus under SL. These findings provide mechanistic insights into light-induced chloroplast degradation in tea plants and highlight CsCV as a potential target for improving crop stress tolerance.
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Affiliation(s)
- Xin Zhang
- College of Food Science, Southwest University, Chongqing, 400715, China
| | - Xiaobei Huang
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China
| | - Zhijun Wu
- College of Food Science, Southwest University, Chongqing, 400715, China.
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Short KL, Lao J, Lam R, Moreau JLM, Ng J, Piran M, Combes AN, Cottle DL, Cole TJ. Disrupted glucocorticoid receptor cell signalling causes a ciliogenesis defect in the fetal mouse renal tubule. EMBO Rep 2025:10.1038/s44319-025-00454-0. [PMID: 40247090 DOI: 10.1038/s44319-025-00454-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2024] [Revised: 03/14/2025] [Accepted: 04/04/2025] [Indexed: 04/19/2025] Open
Abstract
Primary cilia are cell signalling and environment sensing organelles and have important roles during embryogenesis and homeostasis. We demonstrate glucocorticoid signalling is essential for normal cilia formation in mouse and human renal tubules. RNA sequencing of E18.5 kidneys from glucocorticoid receptor (GR) null mice identified significant reductions in key ciliogenesis-related genes including Ccp110, Cep97, Cep290 and Kif3a. Confocal microscopy reveals abnormal, stunted cilia on proximal tubules, podocytes, and collecting duct cells in mice with global or conditional deletion of GR. In contrast, activation of GR signalling with dexamethasone in human kidney organoids or mouse IMCD3 cells increases cilia length, an effect blocked by the GR antagonist RU486. Analysis of GR-null kidney extracts demonstrates reduced levels of pERK and SUFU identifying potential cell pathway crosstalk with GR signalling that coordinately regulate ciliogenesis in the renal tubule. Finally, dexamethasone reduces Aurora kinase A levels, a factor driving cilia disassembly and implicated in the pathogenesis of polycystic kidney disease.
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Affiliation(s)
- Kelly L Short
- Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Jianshen Lao
- Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Rachel Lam
- Department of Anatomy and Developmental Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Julie L M Moreau
- Department of Anatomy and Developmental Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Judy Ng
- Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Mehran Piran
- Department of Anatomy and Developmental Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Alexander N Combes
- Department of Anatomy and Developmental Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Denny L Cottle
- Department of Anatomy and Developmental Biology, Monash University, Melbourne, VIC, 3800, Australia
| | - Timothy J Cole
- Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC, 3800, Australia.
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40
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Shalaby HN, Nawwar DA, Kamel AS, El-Said YA. Blocking hippocampal voltage-gated potassium channel Kv1.3 by dalfampridine abrogates cognitive impairment in experimental autoimmune encephalomyelitis mouse model. Eur J Pharmacol 2025; 998:177647. [PMID: 40252897 DOI: 10.1016/j.ejphar.2025.177647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2025] [Revised: 03/25/2025] [Accepted: 04/17/2025] [Indexed: 04/21/2025]
Abstract
Multiple sclerosis (MS) is devastating motor disorders accompanied by cognitive impairments. Dalfampridine (Dal), was approved for treating MS via blocking voltage-gated potassium channel (Kv). Kv1.3 is one of Dals' targets that showed insults to cognitive function in preclinical and clinical cases. Yet, there is no study that has assessed the potentiality of Dal on Kv1.3-induced cognitive impairment in MS. Thus, the aim of the present study is to reveal the procognitive influence of Dal in the MS animal model. Mice were randomly assigned into four groups. Saline was administered to group 1, conversely groups 2, 3, and 4 received 2 shots of rat spinal cord emulsified with complete Freund's adjuvant. Group 3 received Dal (10 μg/mouse; p. o), while group 4 received Wortmannin (0.1 μg/mouse; i. c.v), a selective phosphoinositide 3-kinases (PI3K) inhibitor, before Dal administration. After 14 days, Dal alleviated motor deficits in the open field arena and rotarod with cognitive restoration in the novel object recognition task. These were accompanied by the reversal of hippocampal neuronal loss and demyelination in corpus callosum. Additionally, Dal inhibited Kv1.3 that enhanced survival signaling, viz; PI3K/Akt. Such activation abates neuroinflammatory markers, glycogen synthase kinase-3 beta (GSK-3β) and nuclear factor-κB levels with subsequent enhancement of BDNF. All these amendments were reversed by Wortmannin pre-administration. In conclusion, this study declares that blockade of Kv1.3 and modulation of PI3K/Akt/GSK-3β/BDNF axis with Dal could be proposed as a promising neuroprotective and memory-enhancing treatment in MS.
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Affiliation(s)
- Heba Nasr Shalaby
- Department of Pharmacology and Toxicology, Faculty of Pharmacy, Cairo University, Cairo, Egypt.
| | - Dalia A Nawwar
- Department of Pharmacology and Toxicology, Faculty of Pharmacy, Cairo University, Cairo, Egypt
| | - Ahmed S Kamel
- Department of Pharmacology and Toxicology, Faculty of Pharmacy, Cairo University, Cairo, Egypt; Department of Pharmacology and Toxicology, Faculty of Pharmacy and Drug Technology, Egyptian Chinese University, Cairo, Egypt
| | - Yasmin Am El-Said
- Department of Pharmacology and Toxicology, Faculty of Pharmacy, Cairo University, Cairo, Egypt
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41
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Oziębło D, Bałdyga N, Leja ML, Jarmuła A, Wilanowski T, Skarżyński H, Ołdak M. Characterization of a novel GRHL2 mutation reveals molecular mechanisms underlying autosomal dominant hearing loss (DFNA28): insights from structural and functional studies. Hum Mol Genet 2025; 34:765-776. [PMID: 39932703 DOI: 10.1093/hmg/ddaf013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2024] [Revised: 01/10/2025] [Accepted: 01/25/2025] [Indexed: 04/22/2025] Open
Abstract
The GRHL2 gene, encoding the Grainyhead-like 2 transcription factor, is essential for various biological processes. While GRHL2 has a complex role in cancer biology, its genetic variants have been also implicated in different forms of hearing loss (HL), including autosomal dominant non-syndromic hearing loss (DFNA28). Here, we report a novel c.1061C>T, p.(Ala354Val) mutation within the DNA binding domain (DBD) of GRHL2 that was identified in a three-generation HL family using a targeted multi-gene panel covering 237 HL-related genes. Unlike the previously reported DFNA28-causing variants that result in protein truncation, the impact of the p.(Ala354Val) missense change cannot be attributed to GRHL2 transcript level or composition, but to an alteration in protein function. Molecular dynamics simulations revealed destabilization of the p.(Ala354Val) mutant GRHL2 dimer interface and an altered DNA binding dynamics, leading to chaotic interaction patterns despite increased binding affinity to DNA. Functional assays demonstrated that the p.(Ala354Val) mutation and other DFNA28-related mutations in the DBD lead to loss of GRHL2 transcriptional transactivation activity, while the p.(Arg537Profs*11) mutation in the dimerization domain results in a gain-of-function effect. The findings indicate that both GRHL2 haploinsufficiency and gain-of-function contribute to HL and underscore the complex regulatory role of GRHL2 in maintaining proper function of the auditory system. Our study emphasizes the need to consider structural and functional aspects of gene variants to better understand their pathogenic potential. As GRHL2 is involved in a multitude of cellular processes, the data gathered here can be also applicable to other conditions.
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Affiliation(s)
- Dominika Oziębło
- Department of Genetics, Institute of Physiology and Pathology of Hearing, M. Mochnackiego 10, Warsaw 02-042, Poland
| | - Natalia Bałdyga
- Department of Genetics, Institute of Physiology and Pathology of Hearing, M. Mochnackiego 10, Warsaw 02-042, Poland
- Doctoral School of Translational Medicine, Centre of Postgraduate Medical Education, Marymoncka 99/103, Warsaw 01-813, Poland
| | - Marcin L Leja
- Department of Genetics, Institute of Physiology and Pathology of Hearing, M. Mochnackiego 10, Warsaw 02-042, Poland
| | - Adam Jarmuła
- Faculty of Food Science, University of Warmia and Mazury in Olsztyn, M. Oczapowskiego 2, Olsztyn 10-719, Poland
| | - Tomasz Wilanowski
- Faculty of Biology, Institute of Genetics and Biotechnology, University of Warsaw, I. Miecznikowa 1, Warsaw 02-096, Poland
| | - Henryk Skarżyński
- Oto-Rhino-Laryngology Surgery Clinic, Institute of Physiology and Pathology of Hearing, M. Mochnackiego 10, Warsaw 02-042, Poland
| | - Monika Ołdak
- Department of Genetics, Institute of Physiology and Pathology of Hearing, M. Mochnackiego 10, Warsaw 02-042, Poland
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Barut G, Çelik A. Gene expression profiles related to apoptosis and levels of DNA oxidative damage in primary dermal fibroblast cells (ATCC® PCS-201-012TM) treated with zirconium oxide nanoparticles. Food Chem Toxicol 2025:115446. [PMID: 40252907 DOI: 10.1016/j.fct.2025.115446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2025] [Revised: 03/11/2025] [Accepted: 04/10/2025] [Indexed: 04/21/2025]
Abstract
Nanoparticles have attracted growing interest in recent years. They are small and can easily penetrate into cells. We investigated the genotoxic, cytotoxic, and apoptotic effects of zirconium nanoparticles on dermal fibroblast cells, the comet assay, Xcelligence system, and apoptotic gene expression, respectively. The comet assay analysis showed an non-signifcant increase in the genetic damage index and the percentage of damaged cells in the groups exposed to 10 and 20-nm zirconium oxide nanoparticles. Xcelligence system analysis observed a decrease in the indices of cells exposed to 10 and 20 nm zirconium oxide nanoparticles in the 48th-hour, 72th-hour, and 96th-hour data. It was observed that caspase 3 and caspase 8 gene expression levels were suppressed in cells exposed to 10 and 20 nm zirconium oxide nanoparticles. Compared to the negative control group, this suppression was significant in the 10 nm groups (p<0.01) while it was not significant in the 20 nm groups. Although zirconium oxide nanoparticles do not show toxicity and genotoxicity at a given concentration, but the overall mechanism is still not clear regarding the consequences of these nanoparticles use and its efect on living system. However, our apoptotic gene expression studies concluded that the nanoparticle size, particularly 10 nm, had an impact on gene expression.
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Affiliation(s)
- Gizem Barut
- Department of Biology, Postgraduate School of Natural and Applied Science, Mersin University, Mersin, Turkey
| | - Ayla Çelik
- Department of Biology(,) Faculty of Science Mersin University, Mersin, Turkey.
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Sečnik A, Volk H, Kunej U, Radišek S, Štajner N, Jakše J. Genome-wide DNA methylation analysis of CBCVd-infected hop plants ( Humulus lupulus var. "Celeia") provides novel insights into viroid pathogenesis. Microbiol Spectr 2025:e0039424. [PMID: 40237512 DOI: 10.1128/spectrum.00394-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2025] [Accepted: 03/14/2025] [Indexed: 04/18/2025] Open
Abstract
Viroids are small, naked, infectious single-stranded RNA molecules that exploit host factors to replicate. Some viroids have been linked to severe diseases in agricultural crops, including the recent outbreak of Cocadviroid rimocitri, previously known as Citrus bark cracking viroid (CBCVd), in hop plants (Humulus lupulus). Numerous studies have demonstrated the involvement of viroid-derived RNA in viroid pathogenesis through interactions with RNAi host factors, leading to alterations in gene expression, metabolism, and phenotype. Recent research efforts have also focused on elucidating viroid-induced changes in DNA methylation patterns via the RNA-directed DNA methylation pathway. In this study, we conducted an epigenome analysis of CBCVd-infected hop plants to provide novel evidence supporting the putative role of DNA methylation in CBCVd viroid pathogenesis. Our findings revealed that several genes involved in pathogen interaction pathways, such as MAPK signaling and LRR, exhibit hypomethylation, suggesting that their increased transcription enhances the host's ability to counteract the pathogen. Intriguingly, genes associated with RNA transcription and encoding key proteins, such as POL II, POL IV, and POL V, display hypermethylation, highlighting the significance of DNA methylation as a defense mechanism.IMPORTANCEViroids are emerging as a substantial threat to various crops; however, our understanding of the molecular mechanisms governing their pathogenesis and the host's defense remains incomplete. This knowledge gap leaves crop disease management reliant on unsustainable strategies. Our research seeks to address this issue by examining the complex world of infected hop plants. Specifically, we are investigating the DNA methylation processes, providing insights into the less-explored aspects of the host's response to viroid interaction. Our aim was to unravel the complexities of how viroids influence the molecular landscape within plants and the corresponding host defenses. By understanding these interactions, we hope to provide insights that lead to more sustainable ways to protect crops and keep agriculture resilient against viroid-related threats.
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Affiliation(s)
- Andrej Sečnik
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Helena Volk
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Urban Kunej
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Sebastjan Radišek
- Plant Protection Department, Slovenian Institute of Hop Research and Brewing, Žalec, Slovenia
| | - Nataša Štajner
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Jernej Jakše
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
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Helmin-Basa A, Kubiszewska I, Trojanek JB, Wiese-Szadkowska M, Janowska M, Kułaga Z, Pawłowska J, Michałkiewicz J. Correlation of the Expression Profile of Peripheral Leukocyte and Liver Tissue Immune Markers With Serum Liver Injury Indices in Children With Biliary Atresia. Mediators Inflamm 2025; 2025:9889239. [PMID: 40270513 PMCID: PMC12017958 DOI: 10.1155/mi/9889239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 09/30/2024] [Accepted: 03/05/2025] [Indexed: 04/25/2025] Open
Abstract
The aim of the study was to find associations between the levels of liver injury serum markers and the selected liver, peripheral leukocytes, and plasma immune characteristics in biliary atresia (BA) children. Twenty-five newly diagnosed BA children aged 4-30 weeks and 12 age-matched controls were included (for leukocytes characteristics) and 19 BA children and 11 controls (for liver studies). The frequencies of T helper 1 (Th1), Th2, Th17, Th17.1 cells as well as numbers of regulatory T (Treg), B cell subsets, and matrix metalloproteinase -2 and -9 (MMP-2 and MMP-9) expressing leukocytes in the whole blood were evaluated by flow cytometry. Plasma concentrations of tissue inhibitors of metalloproteinase (TIMP)-1, -2, MMP-9, interleukin-17A (IL-17A) and IL-6 were assessed by enzyme-linked immunosorbent assay (ELISA). The leukocyte and liver expression of the retinoic acid receptor-related orphan nuclear receptor gamma (RORγT), fork-head winged helix transcription factor P3 (FoxP3), transforming growth factor beta (TGF-β), interleukin-17A (IL-17A), IL-6, IL-1β, IL-21, interleukin 1 receptor antagonist (IL-1Ra), MMP-2, MMP-9, MMP-12 (liver only), TIMP-1, TIMP-2, T-box transcription factor expressed in T cells, also called TBX21 (T-bet), GATA-binding protein 3 (GATA3), and C-type lectin (CD161) mRNA were determined by real time RT-PCR (reverse-transcription polymerase chain reaction). The BA patients were characterized by increased frequencies of peripheral "suppressor" glycoprotein-A repetitions predominant protein (GARP)+latency-associated peptide (LAP)+Treg and activated Treg cells as well as MMP-2 and MMP-9 bearing lymphocytes, elevated plasma TIMP-1 levels, increased leukocyte expression of MMP-9, TIMP-1, TIMP-2, IL-6, and TGF-β, and decreased leukocyte expression of IL-21 and T-bet, increased liver expression of FoxP3, TIMP-1, and decreased liver expression of IL-1β and MMP-2. The following correlations were found between serum markers of liver injury and leukocyte and liver immune characteristics: (a) hemoglobin (Hb) levels correlated negatively with frequency of peripheral "suppressor" GARP+LAP+ Tregs; (b) aspartate aminotransferase (AST) levels correlated positively with frequency of the peripheral Th17.1 subset and expression of leukocyte FoxP3, (c) gamma glutamyltransferase (GGT) levels correlated positively with the peripheral memory B cells frequencies, the leukocyte IL-6 and TIMP-1 gene expression, (d) alanine aminotransferase (ALT) serum levels correlated positively with the naïve B cell frequency and liver TIMP-2 expression, (e) total bilirubin (Bil) levels correlated positively with the leukocyte MMP-9, the plasma IL-6 levels, and the liver TIMP-2 gene expression, (f) direct Bil levels positively correlated with the liver IL-6 and TIMP-2 expression, (g) international normalized ratio of prothrombin time (PT/INR) concentrations correlated positively with the peripheral Th17.1 subset frequency and the leukocyte MMP-9 but negatively with the liver FoxP3 expression. There were numerous strong positive correlations between the BA liver genes known to be involved in upregulation of IL-17 axis and MMPs/TIMPs expression. No prevailing leukocyte or liver single markers were uniquely associated with serum liver injury indices. BA immune profile is very complex with no single characteristics that would distinguish it from other liver inflammatory diseases.
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Affiliation(s)
- Anna Helmin-Basa
- Department of Immunology, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Torun, Bydgoszcz, Poland
| | - Izabela Kubiszewska
- Department of Immunology, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Torun, Bydgoszcz, Poland
| | - Joanna B. Trojanek
- Department of Microbiology and Clinical Immunology, The Children's Memorial Health Institute, Warsaw, Poland
| | - Małgorzata Wiese-Szadkowska
- Department of Immunology, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Torun, Bydgoszcz, Poland
| | - Maria Janowska
- Department of Pediatric Surgery and Organ Transplantation, The Children's Memorial Health Institute, Warsaw, Poland
| | - Zbigniew Kułaga
- Department of Public Health, The Children's Memorial Health Institute, Warsaw, Poland
| | - Joanna Pawłowska
- Department of Gastroenterology, Hepatology, Nutritional Disturbances and Pediatrics, The Children's Memorial Health Institute, Warsaw, Poland
| | - Jacek Michałkiewicz
- Department of Microbiology and Clinical Immunology, The Children's Memorial Health Institute, Warsaw, Poland
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Llobregat B, Abad-Fuentes A, Mercader JV, González-Candelas L, Ballester AR. The role of Penicillium expansum histone deacetylases HosA and HosB in growth, development, and patulin production. Microbiol Res 2025; 297:128181. [PMID: 40262355 DOI: 10.1016/j.micres.2025.128181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2024] [Revised: 04/07/2025] [Accepted: 04/09/2025] [Indexed: 04/24/2025]
Abstract
Histone modifications are key epigenetic mechanisms for gene regulation in response to environmental stimuli. Histone acetylation is crucial for regulating chromatin accessibility and is controlled by histone-modifying enzymes: histone acetyltransferases (HATs) and histone deacetylases (HDACs). This study examined the roles of two HDACs, HosA and HosB, in the fungus Penicillium expansum. While the deletion of hosB did not affect the phenotype, HosA was found to play a crucial role in growth, development, and conidiation. The ΔhosA strain exhibited a characteristic fluffy phenotype and a significant reduction in conidiation. Expression analysis indicated that these differences were related to lower expression of the core regulatory gene wetA, and, to a lesser extent, brlA and abaA. Additionally, the growth of ΔhosA was negatively affected by the addition of calcofluor white and sodium chloride, while the deletion of hosA increased tolerance to sodium dodecyl sulfate and hydrogen peroxide on solid media. Furthermore, the ΔhosA strain showed an abnormal pattern of patulin production during in vitro growth, and reduced virulence likely due to growth retardation and impaired conidiation. These findings suggest that HosA is an epigenetic regulator of conidiation and plays an indirect role in secondary metabolite production and virulence in P. expansum.
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Affiliation(s)
- Belén Llobregat
- Institute of Agrochemistry and Food Technology, Spanish Council for Scientific Research (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, Valencia 46980, Spain
| | - Antonio Abad-Fuentes
- Institute of Agrochemistry and Food Technology, Spanish Council for Scientific Research (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, Valencia 46980, Spain
| | - Josep V Mercader
- Institute of Agrochemistry and Food Technology, Spanish Council for Scientific Research (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, Valencia 46980, Spain
| | - Luis González-Candelas
- Institute of Agrochemistry and Food Technology, Spanish Council for Scientific Research (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, Valencia 46980, Spain
| | - Ana-Rosa Ballester
- Institute of Agrochemistry and Food Technology, Spanish Council for Scientific Research (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, Valencia 46980, Spain.
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Motta IG, da Silva AG, Feltrin IR, Souza SV, Degan Mattos AC, Morelli KG, Castro T, Nishimura TK, Ginther OJ, Pugliesi G. Effects of estradiol on PGF 2α synthesis and corpus luteum function during early pregnancy in beef heifers. Theriogenology 2025; 237:49-60. [PMID: 39970550 DOI: 10.1016/j.theriogenology.2025.02.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Revised: 02/12/2025] [Accepted: 02/13/2025] [Indexed: 02/21/2025]
Abstract
This study investigated the effects of estradiol benzoate (EB) administered 13 days post-ovulation on PGF2α release and corpus luteum function in pregnant and non-pregnant heifers. In Exp. 1, Nelore (Bos indicus) heifers, either inseminated or non-inseminated, were randomly assigned on Day 13 (D13) to receive 0, 1, or 2 mg of EB. Blood samples were collected at baseline (H0) and hourly from H3 to H12 to assess plasma P4 and PGFM concentrations. In a subgroup of pregnant heifers, blood samples were also collected to determine plasma E2 concentrations. Doppler ultrasonography was performed daily from D13 to D19 for monitoring the luteal function, and pregnancy was determined on D28. Luteolysis was earlier (P < 0.05) in non-inseminated heifers treated with 1 or 2 mg EB than in the controls (16.3 ± 0.2 vs. 17.3 ± 0.6 days). Pregnancy rate was lower (P < 0.05) in the EB-1 (50 %; 8/16) and EB-2 (29.2 %; 7/24) groups than in the EB-0 group (90 %; 9/10). The average PGFM concentrations were greater (P < 0.05) in the EB-1 and EB-2 groups than in the EB-0 group, regardless of gestational status. In Exp. 2, inseminated (n = 39) and non-inseminated (n = 21) Nelore heifers received either 0 or 1 mg of EB on D13. Three hours later, endometrial cytology was performed and samples were evaluated by qPCR. Expression of OXTR and PGR was greater and IL1β was lower in EB-treated heifers (P < 0.05). The ESR2 abundance was lower (P < 0.05) in pregnant heifers, regardless of EB treatment. In conclusion, an elevation of circulating E2 at late diestrus upregulates the OXTR and PGR expression in the endometrium, inducing PGF2α release and luteolysis, which negatively impact on pregnancy establishment, especially in heifers treated with 2 mg EB.
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Affiliation(s)
- Igor Garcia Motta
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | | | - Isabella Rio Feltrin
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | - Samuel Volpe Souza
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | - Ana Clara Degan Mattos
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | - Karine Galhego Morelli
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | - Thadeu Castro
- Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, MDN, Wisconsin, USA
| | - Thiago Kan Nishimura
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil
| | - Oliver Joseph Ginther
- Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, MDN, Wisconsin, USA
| | - Guilherme Pugliesi
- Department of Animal Reproduction, University of São Paulo - USP, Pirassununga, SP, Brazil.
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Abós B, Morel E, Ama LFD, Ordás MC, Vicente-Gil S, Carrasco JC, Koppang E, Tafalla C, Herranz-Jusdado JG. Immunological characterization of the rainbow trout bursa. FISH & SHELLFISH IMMUNOLOGY 2025; 162:110345. [PMID: 40246038 DOI: 10.1016/j.fsi.2025.110345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2025] [Revised: 03/19/2025] [Accepted: 04/14/2025] [Indexed: 04/19/2025]
Abstract
The bursa of Fabricius is an immune organ, located in the caudo-dorsal surface of the cloaca, responsible for the development and maturation of avian B cells. A few years ago, a lymphoepithelial tissue placed caudal to the urogenital papilla of the cloaca analogous to the bursa was identified for the first time in Atlantic salmon (Salmo salar). The salmon bursa was demonstrated to involute around sexual maturation, as in birds. However, no primary lymphoid functions were identified in this tissue. In the current study, we have identified a homologous immune organ in rainbow trout (Oncorhynchus mykiss), a different salmonid species. This lymphoepithelium covering a blind sac, caudal to the anus, was identified in rainbow trout at different stages of development and it also experienced regression in an age-dependent way. It contained abundant IgM+ B cells and CD3+ cells and especially numerous was the number of MHC II-expressing cells. In contrast to Atlantic salmon, in rainbow trout, the bursa epithelium contained quite a few IgT+ B cells but very few IgD+ B cells. Thus, by flow cytometry, we could determine that the IgM+ B cells identified in the trout bursa had lost surface IgD expression. Interestingly, although an immunization of rainbow trout by bath barely had effects on the bursa at a transcriptional level, when fish were immunized anally with a model antigen, there were significant changes in the levels of transcription of immune genes in this tissue. These included secreted igm, secreted and membrane igd, bcma and prdm1-a2. Altogether these results evidence the existence of a bursa-like immune structure in another teleost species and provide novel information to understand the immune role of this tissue in fish, pointing to a relation to gut immune responses.
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Affiliation(s)
- Beatriz Abós
- Biotechnology Department, National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Madrid, Spain
| | - Esther Morel
- Biotechnology Department, National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Madrid, Spain
| | - Laura Fernández-Del Ama
- Animal Health Research Center (CISA), National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Valdeolmos, Madrid, Spain
| | - M Camino Ordás
- Biology, Geology, Physics and Chemistry Department, Rey Juan Carlos University, Móstoles, Madrid, Spain
| | - Samuel Vicente-Gil
- Biotechnology Department, National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Madrid, Spain
| | - Juan Carlos Carrasco
- Biotechnology Department, National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Madrid, Spain
| | - Erling Koppang
- Unit of Anatomy, Veterinary Faculty, Norwegian University of Life Sciences, Ås, Norway
| | - Carolina Tafalla
- Biotechnology Department, National Institute for Agricultural and Food Research and Technology (INIA), Spanish Research Council (CSIC), Madrid, Spain.
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Azevedo LM, de Oliveira RR, Dos Reis GL, de Campos Rume G, Alvarenga JP, Gutiérrez RM, de Carvalho Costa J, Chalfun-Junior A. Hormonal crosstalk during the reproductive stage of Coffea arabica: interactions among gibberellin, abscisic acid, and ethylene. PLANTA 2025; 261:110. [PMID: 40223003 DOI: 10.1007/s00425-025-04679-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2025] [Accepted: 03/27/2025] [Indexed: 04/15/2025]
Abstract
MAIN CONCLUSION The application of gibberellin and abscisic acid in coffee plants resulted in increased floral bud formation and fruit production by regulating key genes involved in flowering and hormonal biosynthesis pathways. Despite ongoing efforts, understanding hormonal regulation in perennial and woody species with complex phenological cycles, such as Coffea arabica L., remains limited. Given the global importance of coffee, identifying the main regulators of reproductive development is crucial to guarantee production, especially in face of climate change. This study investigated the effects of gibberellin (GA) and abscisic acid (ABA) at different concentrations (5, 25 and 100 ppm) in the reproductive development of C. arabica. Phenological analyses, molecular identification of genes involved in GA and ABA biosynthesis, degradation, and signaling, as well as gene expression profiling in leaves and floral buds during floral induction and development, were conducted. Promoter analysis of CaFT, quantification of 1-aminocyclopropane-1-carboxylate (ACC), enzymatic activity of ACC oxidase (ACO), and ethylene content were also assessed. Results showed that GA irrespective of concentration and ABA at 25 ppm applied during the main period of floral induction (March) significantly increased the number of floral buds, with ABA also accelerating the development. Similarly, applying these regulators in plants with floral buds at more advanced stages (August) increased the number of floral buds and fruit production in the GA (5 and 100 ppm) and ABA (25 and 100 ppm) treatments. Phylogenetic and molecular analyses identified genes related to GA and ABA biosynthesis, degradation, and signaling in coffee plants. GA and ABA treatments affected the expression of genes related to floral induction and organ formation, such as CaDELLA in March, which may relate to the increased number of floral buds. Moreover, in August, plants treated with 5 and 100 ppm GA and 100 ppm ABA showed up-regulation of CaFT1 expression, likely due to the down-regulation of CaCO during this period. In addition to GA-ABA interactions, our results suggest that GA promotes ACC accumulation in leaves in August, which may act as a mobile signal transported to floral buds, where its conversion to ethylene could regulate anthesis, highlighting a GA-ACC-ethylene interaction in coffee flowering. However, no significant differences in ethylene biosynthesis were observed in March with the application of these hormones, underscoring the incipient role of ethylene during floral induction in coffee. These results suggest reciprocal regulation of floral development by GA-ABA pathways in a dose-dependent manner and interacting with other hormonal pathways such as the ethylene biosynthesis in leaves and floral buds. These findings provide new insights into the hormonal regulation of coffee flowering, guiding field practices and breeding programs to maximize coffee production.
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Affiliation(s)
- Lillian Magalhães Azevedo
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Raphael Ricon de Oliveira
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
- Department of Biological Sciences, State University of Santa Cruz (UESC), Ilhéus, Bahia, Brazil
| | - Gabriel Lasmar Dos Reis
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Gabriel de Campos Rume
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Joyce Pereira Alvarenga
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Robert Márquez Gutiérrez
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Júlia de Carvalho Costa
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil
| | - Antonio Chalfun-Junior
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras (UFLA), Lavras, Minas Gerais, Brazil.
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Farias P, Francisco R, Maccario L, Herschend J, Sørensen SJ, Morais PV. Metabolic response of tellurite resistant Bacillus altitudinis strain 3W19 highlights the potential as a model organism for bioremediation. Sci Rep 2025; 15:12745. [PMID: 40222993 PMCID: PMC11994780 DOI: 10.1038/s41598-025-95321-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2024] [Accepted: 03/20/2025] [Indexed: 04/15/2025] Open
Abstract
Contaminated environments can pose new challenges when new contaminants appear and can select organisms with new genetic and metabolic strategies. The increased presence of Te(IV) in the environment is becoming more important. This highlights how underexplored the investigation of how bacteria molecularly respond to less common environmental contaminants, such as tellurite when compared to other metals/ metalloids. Understanding what tools an organism uses from its genetic pool when responding to a new contaminant requires a multiple-technique approach, such as metabolic tests and differential omics analysis. These analyses provide a full metabolic and phenotypical map of stress response that can include new resistance mechanisms, whether specific or not. This study aimed to determine if Bacillus altitudinis strain 3W19, isolated from a Te(IV) contaminated site, presents specific changes at the proteomic level when exposed to the metalloid. In strain 3W19, growth in the presence of Te(IV) upregulated pathways of amino acid metabolism and membrane transport and downregulated pathways of carbohydrate metabolism. Growth in the presence of Te(IV) also induced the formation of reactive oxygen species and lowered the metabolic activity of the strain. This metal led to the overexpression of the proteins of the ter gene cluster. When compared with other strains, the ter system identified in this strain differed in genomic organization from related Bacillus sp. strains. Together, these strain-specificities can contribute to understanding its Te(IV) resistance phenotype.
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Affiliation(s)
- Pedro Farias
- University of Coimbra, CEMMPRE, ARISE, Department of Life Sciences, 3000-456, Coimbra, Portugal
| | - Romeu Francisco
- University of Coimbra, CEMMPRE, ARISE, Department of Life Sciences, 3000-456, Coimbra, Portugal
| | - Lorrie Maccario
- Department of Biology, Section of Microbiology, University of Copenhagen, Copenhagen, Denmark
| | - Jakob Herschend
- Department of Biology, Section of Microbiology, University of Copenhagen, Copenhagen, Denmark
| | - Søren J Sørensen
- Department of Biology, Section of Microbiology, University of Copenhagen, Copenhagen, Denmark
| | - Paula V Morais
- University of Coimbra, CEMMPRE, ARISE, Department of Life Sciences, 3000-456, Coimbra, Portugal.
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Peralta-Vallejo N, Cañete T, Sampedro-Viana D, Güell-Falgueras P, Río-Álamos C, Oliveras I, Tobeña A, Aznar S, Fernández-Teruel A. Neonatal handling enhances behavioural and attentional domains, and frontocortical synaptic maturation in rat models of schizophrenia-like behaviour and anxiety-related responses. Prog Neuropsychopharmacol Biol Psychiatry 2025; 139:111364. [PMID: 40233871 DOI: 10.1016/j.pnpbp.2025.111364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/07/2025] [Revised: 04/06/2025] [Accepted: 04/12/2025] [Indexed: 04/17/2025]
Abstract
The Roman inbred rat strains are a neurodevelopmental model, with the Roman High Avoidance (RHA) presenting specific behaviours and frontal cortex (FC) gene expression changes relevant to schizophrenia symptoms. We wanted to assess the potentially positive modulatory and enduring effects of neonatal handling (NH) on the innate traits associated with both the RHA and their counterpart Roman Low Avoidance (RLA). Male rats received NH or were left untreated (controls). Two different age groups were considered: adolescent and adults. The assessment encompassed exploratory behaviour, social behaviour, anxiety-related behaviour (self-grooming), sensorimotor gating (prepulse inhibition; PPI), and the analysis of gene expression associated with synaptic processes, cortical maturation, and neuroplasticity in the FC. In adolescent rats, NH increased novelty exploration and activity, and reduced novelty-induced self-grooming in RLAs, whereas it improved PPI in RHAs. In adult rats, NH increased novelty-induced activity in both strains, reduced self-grooming in RLA rats, and enhanced social interaction and PPI in RHAs. NH produced significant effects on gene expression in adolescent RHA rats. These effects were observed at the presynaptic level by a reduction of Snap25 and increases of Cables1 and Cdk5, and at the postsynaptic level by increases of Grin2b, Homer1 and Nrg1, as well as by a NH-induced enhancement of Bdnf. NH also increased Nrg1 and Bdnf expression in adult RLA rats. These findings show for the first time that NH is able to modulate several genetically linked synaptic/neuroplasticity alterations in RHA vs. RLA rats, which are paralleled by NH-induced improvements in novelty exploration, social behaviour and sensorimotor gating (PPI).
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Affiliation(s)
- Natalia Peralta-Vallejo
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain; Centre for Neuroscience and Stereology, and Center for Translational Research, Copenhagen University Hospital Bispebjerg-Frederiksberg, Denmark
| | - Toni Cañete
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain
| | - Daniel Sampedro-Viana
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain
| | - Pau Güell-Falgueras
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain
| | - Cristóbal Río-Álamos
- Department of Psychology, School of Medicine, Austral University of Chile, Valdivia, Chile
| | - Ignasi Oliveras
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain; Department of Medicine, Faculty of Medicine and Health Sciences, Universitat Internacional de Catalunya, Barcelona, Spain
| | - Adolf Tobeña
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain
| | - Susana Aznar
- Centre for Neuroscience and Stereology, and Center for Translational Research, Copenhagen University Hospital Bispebjerg-Frederiksberg, Denmark.
| | - Alberto Fernández-Teruel
- Department of Psychiatry & Forensic Medicine, Institute of Neurosciences, Faculty of Medicine, Autonomous University of Barcelona, 08193 Bellaterra, Barcelona, Spain.
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