For: | Yang JL, Wang MS, Cheng AC, Pan KC, Li CF, Deng SX. A simple and rapid method for extracting bacterial DNA from intestinal microflora for ERIC-PCR detection. World J Gastroenterol 2008; 14(18): 2872-2876 [PMID: 18473413 DOI: 10.3748/wjg.14.2872] |
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URL: | https://www.wjgnet.com/1007-9327/full/v14/i18/2872.htm |
Number | Citing Articles |
1 |
Tanmaya Nayak, Ananta N. Panda, Khushbu Kumari, Tapan Kumar Adhya, Vishakha Raina. Comparative Genomics of a Paddy Field Bacterial Isolate Ochrobactrum sp. CPD-03: Analysis of Chlorpyrifos Degradation Potential. Indian Journal of Microbiology 2020; 60(3): 325 doi: 10.1007/s12088-020-00864-9
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2 |
N. Anis Ahamed, Ibrahim A. Arif, Sarah Al-Rashed, A. Panneerselvam, V. Ambikapathy. In vitro thrombolytic potential of fibrinolytic enzyme from Brevibacterium sp. isolated from the root of the plant, Aloe castellorum. Journal of King Saud University - Science 2022; 34(3): 101868 doi: 10.1016/j.jksus.2022.101868
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3 |
Cristina M. Muntean, Alexandra Lapusan, Liora Mihaiu, Razvan Stefan. Strain dependent UV degradation of Escherichia coli DNA monitored by Fourier transform infrared spectroscopy. Journal of Photochemistry and Photobiology B: Biology 2014; 130: 140 doi: 10.1016/j.jphotobiol.2013.11.009
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4 |
Swathi Purighalla, Saritha Esakimuthu, Mallika Reddy, Tara Seth, Sunita D. Patil, George K. Varghese, Raghunath Dasarathy, Vijay S. Richard, Vasan K. Sambandamurthy. Investigation into a community outbreak of Salmonella Typhi in Bengaluru, India. Indian Journal of Medical Research 2017; 146(Suppl 1): S15 doi: 10.4103/ijmr.IJMR_1201_16
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5 |
Holger F. R. Jentsch, Andreas Buchmann, Abel Friedrich, Sigrun Eick. Nonsurgical therapy of chronic periodontitis with adjunctive systemic azithromycin or amoxicillin/metronidazole. Clinical Oral Investigations 2016; 20(7): 1765 doi: 10.1007/s00784-015-1683-1
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6 |
Holger F. R. Jentsch, Martin Dietrich, Sigrun Eick. Non-Surgical Periodontal Therapy with Adjunctive Amoxicillin/Metronidazole or Metronidazole When No Aggregatibacter actinomycetemcomitans Is Detected—A Randomized Clinical Trial. Antibiotics 2020; 9(10): 686 doi: 10.3390/antibiotics9100686
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7 |
Di Fan, Timothy Schwinghamer, Donald L. Smith. Isolation and diversity of culturable rhizobacteria associated with economically important crops and uncultivated plants in Québec, Canada. Systematic and Applied Microbiology 2018; 41(6): 629 doi: 10.1016/j.syapm.2018.06.004
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8 |
Kabiru O. Akinyemi, Rebecca O. Abegunrin, Bamidele A. Iwalokun, Christopher O. Fakorede, Oliwia Makarewicz, Heinrich Neubauer, Mathias W. Pletz, Gamal Wareth. The Emergence of Klebsiella pneumoniae with Reduced Susceptibility against Third Generation Cephalosporins and Carbapenems in Lagos Hospitals, Nigeria. Antibiotics 2021; 10(2): 142 doi: 10.3390/antibiotics10020142
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9 |
Jun-ni Tang, Zhi-guang Zeng, Hong-ning Wang, Tai Yang, Peng-ju Zhang, Yu-ling Li, An-yun Zhang, Wen-qiao Fan, Yi Zhang, Xin Yang, Su-jun Zhao, Guo-bao Tian, Li-kou Zou. An effective method for isolation of DNA from pig faeces and comparison of five different methods. Journal of Microbiological Methods 2008; 75(3): 432 doi: 10.1016/j.mimet.2008.07.014
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10 |
Alireza Mohammadzadeh, Jalal Mardaneh, Reza Ahmadi, Javad Adabi. Evaluation of the Virulence Features and Antibiotic Resistance Patterns of Pathogenic Pseudomonas aeruginosa Strains Isolated from Hospitalized Patients in Gonabad, Iran. Archives of Pediatric Infectious Diseases 2017; (In press) doi: 10.5812/pedinfect.41267
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11 |
E.S. Kostryukova, I.Y. Karpova, A.K. Larin, A.C. Popenko, A.V. Tyaht, E.N. Ilina. Variability in the relative quantity of human DNA resulted from metagenomic analysis of gut microbiota. Biomeditsinskaya Khimiya 2014; 60(6): 695 doi: 10.18097/PBMC20146006695
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12 |
Holger F.R. Jentsch, Thea Heusinger, Anne Weickert, Sigrun Eick. Professional tooth cleaning prior to non‐surgical periodontal therapy: A randomized clinical trial. Journal of Periodontology 2020; 91(2): 174 doi: 10.1002/JPER.19-0023
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13 |
Pedro Fernández-Soto, Virginia Velasco Tirado, Cristina Carranza Rodríguez, José Luis Pérez-Arellano, Antonio Muro, David Joseph Diemert. Long-Term Frozen Storage of Urine Samples: A Trouble to Get PCR Results in Schistosoma spp. DNA Detection?. PLoS ONE 2013; 8(4): e61703 doi: 10.1371/journal.pone.0061703
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14 |
S. Gnat, A. Nowakiewicz, G. Ziółkowska, A. Trościańczyk, B. Majer-Dziedzic, P. Zięba. Evaluation of growth conditions and DNA extraction techniques used in the molecular analysis of dermatophytes. Journal of Applied Microbiology 2017; 122(5): 1368 doi: 10.1111/jam.13427
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15 |
Ingy El-Soudany, Nancy Attia, Rasha Emad, Shahinda Rezk. The Effect of Citric and Ascorbic Acids as Anti-Biofilm and Anti-Capsular Agents on Multidrug-Resistant <i>Acinetobacter baumannii</i>. Medical Principles and Practice 2024; 33(3): 281 doi: 10.1159/000537852
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16 |
Gangzheng Wang, Yuhua Gong, Ziyan Huang, Yinbing Bian. Identification of and antimicrobial activity of plant extracts against Pseudomonas putida from rot fruiting bodies of Pleurotus eryngii. Scientia Horticulturae 2016; 212: 235 doi: 10.1016/j.scienta.2016.10.009
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17 |
Chantal Reusken, Cecile Baronti, Ramona Mögling, Anna Papa, Katrin Leitmeyer, Remi N Charrel. Toscana, West Nile, Usutu and tick-borne encephalitis viruses: external quality assessment for molecular detection of emerging neurotropic viruses in Europe, 2017.
Eurosurveillance 2019; 24(50) doi: 10.2807/1560-7917.ES.2019.24.50.1900051
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18 |
Peter Irwin, Ly Nguyen, Yiping He, George Paoli, Andrew Gehring, Chin-Yi Chen. The near-quantitative sampling of genomic DNA from various food-borne Eubacteria. BMC Microbiology 2014; 14(1) doi: 10.1186/s12866-014-0326-z
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19 |
Abduljabbar Jaloob Aljanaby Ahmed, Hassan Abdulhusain Alhasani Alaa. Virulence factors and antibiotic susceptibility patterns of multidrug resistance Klebsiella pneumoniae isolated from different clinical infections. African Journal of Microbiology Research 2016; 10(22): 829 doi: 10.5897/AJMR2016.8051
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20 |
Abdulaziz Abdullah Al-Khureif, Badreldin A. Mohamed, Adel Zia Siddiqui, Mohamed Hashem, Aftab Ahmed Khan, Darshan Devang Divakar. Clinical, host-derived immune biomarkers and microbiological outcomes with adjunctive photochemotherapy compared with local antimicrobial therapy in the treatment of peri-implantitis in cigarette smokers. Photodiagnosis and Photodynamic Therapy 2020; 30: 101684 doi: 10.1016/j.pdpdt.2020.101684
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21 |
Gholam Reza Ghezelbash, Maryam Haddadi. Production of nanocalcite crystal by a urease producing halophilic strain of Staphylococcus saprophyticus and analysis of its properties by XRD and SEM. World Journal of Microbiology and Biotechnology 2018; 34(12) doi: 10.1007/s11274-018-2544-2
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22 |
Cristina M. Muntean, Nicoleta E. Dina, Alexandra Tǎbǎran, Ana M. R. Gherman, Alexandra Fǎlǎmaş, Loredana E. Olar, Liora M. Colobǎţiu, Rǎzvan Ştefan. Identification of Salmonella Serovars before and after Ultraviolet Light Irradiation by Fourier Transform Infrared (FT-IR) Spectroscopy and Chemometrics. Analytical Letters 2021; 54(1-2): 150 doi: 10.1080/00032719.2020.1731524
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23 |
Huỳnh Kim Yến, Bùi Thị Minh Diệu. Phân lập và nhận diện dòng vi khuẩn chịu nhiệt cao có khả năng phân hủy lông gia súc - gia cầm. Can Tho University, Journal of Science 2018; : 6 doi: 10.22144/ctu.jvn.2018.175
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24 |
Sigrun Eick, Jasmin Nydegger, Walter Bürgin, Giovanni E. Salvi, Anton Sculean, Christoph Ramseier. Microbiological analysis and the outcomes of periodontal treatment with or without adjunctive systemic antibiotics—a retrospective study. Clinical Oral Investigations 2018; 22(9): 3031 doi: 10.1007/s00784-018-2392-3
|
25 |
Yantong Liu, Lina Zhao, Zhongying Qiu, Hao Yuan. The gut microbiota diversity of five Orthoptera (Insecta, Polyneoptera) insects determined by DNA metabarcoding. Biodiversity Data Journal 2023; 11 doi: 10.3897/BDJ.11.e98162
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26 |
Funda Erdem, Nurcan Cetinkaya. Digestibility ofJuncus acutusand its effects on ruminal cellulolytic bacteria. Italian Journal of Animal Science 2016; 15(1): 69 doi: 10.1080/1828051X.2016.1139327
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27 |
Marwan Jawad Msarah, Izyanti Ibrahim, Aidil Abdul Hamid, Wan Syaidatul Aqma. Optimisation and production of alpha amylase from thermophilic Bacillus spp. and its application in food waste biodegradation. Heliyon 2020; 6(6): e04183 doi: 10.1016/j.heliyon.2020.e04183
|
28 |
H. F. R. Jentsch, N. Arnold, V. Richter, J. Deschner, T. Kantyka, S. Eick. Salivary, gingival crevicular fluid and serum levels of ghrelin and chemerin in patients with periodontitis and overweight. Journal of Periodontal Research 2017; 52(6): 1050 doi: 10.1111/jre.12476
|
29 |
Aslı Sakmanoglu, Zafer Sayin, Uckun Sait Ucan, Yasemin Pinarkara, Ali Uslu, Osman Erganis. Comparison of five methods for isolation of DNA from Mycoplasma cynos. Journal of Microbiological Methods 2017; 140: 70 doi: 10.1016/j.mimet.2017.07.003
|
30 |
Haoran Yang, Qingqian Zhou, Jingjie Hu, Zhenmin Bao, Mengqiang Wang. A Chelex-100-based rapid DNA extraction method and its application in the detection of shrimp pathogens. Electronic Journal of Biotechnology 2024; 70: 29 doi: 10.1016/j.ejbt.2024.04.004
|
31 |
Rafal Ismael, Alaa K. Alhameedawi, Rajaa S. Abbas, Sarah M.S. Alsallameh, Halah Amer, Müge Firat, Maryam Karkhane. Staphylococcus aureus virulence genes and methicillin-resistant gene detection and antimicrobial resistance profiles isolated from different infection sites. Egyptian Pharmaceutical Journal 2023; 22(2): 265 doi: 10.4103/epj.epj_187_22
|
32 |
Fecal carriage of ESBL-producing <em>Escherichia coli</em> in Egyptian patients admitted to the Medical Research Institute hospital, Alexandria University. AIMS Microbiology 2020; 6(4): 422 doi: 10.3934/microbiol.2020025
|
33 |
Pascale F. M. Stadelmann, Sigrun Eick, Giovanni E. Salvi, Daniel Surbek, Stefan Mohr, Walter Bürgin, Christoph A. Ramseier, Anton Sculean. Increased periodontal inflammation in women with preterm premature rupture of membranes. Clinical Oral Investigations 2015; 19(6): 1537 doi: 10.1007/s00784-014-1371-6
|
34 |
Ayomi Dilhari, Asanga Sampath, Chinthika Gunasekara, Neluka Fernando, Deepaka Weerasekara, Chris Sissons, Andrew McBain, Manjula Weerasekera. Evaluation of the impact of six different DNA extraction methods for the representation of the microbial community associated with human chronic wound infections using a gel-based DNA profiling method. AMB Express 2017; 7(1) doi: 10.1186/s13568-017-0477-z
|
35 |
Ning Sun, Congliang Deng, Yi Liu, Xiaoli Zhao, Yan Tang, Renxiao Liu, Qiang Xia, Wenlong Yan, Guanglu Ge. Optimization of influencing factors of nucleic acid adsorption onto silica-coated magnetic particles: Application to viral nucleic acid extraction from serum. Journal of Chromatography A 2014; 1325: 31 doi: 10.1016/j.chroma.2013.11.059
|
36 |
Sigrun Eick, Ayse Mathey, Karolin Vollroth, Martin Kramesberger, Walter Bürgin, Anton Sculean, Christoph Ramseier, Holger Jentsch. Persistence of Porphyromonas gingivalis is a negative predictor in patients with moderate to severe periodontitis after nonsurgical periodontal therapy. Clinical Oral Investigations 2017; 21(2): 665 doi: 10.1007/s00784-016-1933-x
|
37 |
S. Ghashghaei, G. Emtiazi. Increasing the antibacterial activity of gentamicin in combination with extracted polyphosphate from Bacillus megaterium
. Journal of Applied Microbiology 2013; 114(5): 1264 doi: 10.1111/jam.12142
|
38 |
Mario Bassetti, Dorothee Schär, Beat Wicki, Sigrun Eick, Christoph A. Ramseier, Nicole B. Arweiler, Anton Sculean, Giovanni E. Salvi. Anti‐infective therapy of peri‐implantitis with adjunctive local drug delivery or photodynamic therapy: 12‐month outcomes of a randomized controlled clinical trial. Clinical Oral Implants Research 2014; 25(3): 279 doi: 10.1111/clr.12155
|
39 |
Amelie Meyer‐Bäumer, Sigrun Eick, Christian Mertens, Lorenz Uhlmann, Daniel Hagenfeld, Peter Eickholz, Ti‐Sun Kim, Raluca Cosgarea. Periodontal pathogens and associated factors in aggressive periodontitis: results 5–17 years after active periodontal therapy. Journal of Clinical Periodontology 2014; 41(7): 662 doi: 10.1111/jcpe.12255
|
40 |
Tropheryma Whipplei
Intestinal Colonization in Immunocompromised Children in Iran: A Preliminary Study
. Future Microbiology 2021; 16(15): 1161 doi: 10.2217/fmb-2021-0091
|
41 |
Naresh Devarajan, Thilo Köhler, Periyasamy Sivalingam, Christian van Delden, Crispin K. Mulaji, Pius T. Mpiana, Bastiaan W. Ibelings, John Poté. Antibiotic resistant Pseudomonas spp. in the aquatic environment: A prevalence study under tropical and temperate climate conditions. Water Research 2017; 115: 256 doi: 10.1016/j.watres.2017.02.058
|
42 |
Cristina M. Muntean, Rǎzvan Ştefan, Alexandra Tǎbǎran, Attila Bende, Alexandra Fǎlǎmaş, Loredana E. Olar.
Characterization of the Structural Changes of the Genomic DNA of
Staphylococcus aureus
Due to Femtosecond Laser Irradiation by Fourier Transform Infrared (FT-IR) Spectroscopy
. Analytical Letters 2024; 57(5): 711 doi: 10.1080/00032719.2023.2222002
|
43 |
Mohammad I. Abu Taha, Hatem K. Eideh, Sameeh M. Saed, Hazem Jaber. Fourier Transform Infrared Spectroscopy Typing an <i>Enterococcus</i> sp.. Journal of Modern Physics 2014; 5(16): 1698 doi: 10.4236/jmp.2014.516169
|
44 |
Mukesh Kumar, Aundy Kumar, Kuleshwar Prasad Sahu, Asharani Patel, Bhaskar Reddy, Neelam Sheoran, Charishma Krishnappa, Hosahatti Rajashekara, Someshwar Bhagat, Rajeev Rathour. Deciphering core-microbiome of rice leaf endosphere: Revelation by metagenomic and microbiological analysis of aromatic and non-aromatic genotypes grown in three geographical zones. Microbiological Research 2021; 246: 126704 doi: 10.1016/j.micres.2021.126704
|
45 |
L. Awawdeh, C. Turni, J. Henning, R.E. Allavena, R.N. Cobbold, J.L. Mollinger, J.S. Gibson. An Optimized Protocol for Molecular Screening of Avian Pathogenic Escherichia Coli From Broiler Chickens in South East Queensland, Australia. Journal of Applied Poultry Research 2019; 28(4): 1370 doi: 10.3382/japr/pfz078
|
46 |
Alfonso Iovieno, Darlene Miller, James Lonnen, Simon Kilvington, Eduardo C. Alfonso.
Extraction of
Acanthamoeba
DNA by Use of Chelex Resin
. Journal of Clinical Microbiology 2011; 49(1): 476 doi: 10.1128/JCM.01795-10
|
47 |
Rojan Ibrahim Albazaz, Najim Abdulla Yassin. Prevalence and Molecular Detection of Virulence Genes among Multidrug-Resistant Escherichia coli from Human Clinical Samples and Poultry in Duhok City, Iraq. Medical Journal of Babylon 2024; 21(Suppl 1): S81 doi: 10.4103/mjbl.mjbl_204_23
|
48 |
Sabrina Ruggiero, Raluca Cosgarea, Jan Potempa, Barbara Potempa, Sigrun Eick, Matthias Chiquet. Cleavage of extracellular matrix in periodontitis: Gingipains differentially affect cell adhesion activities of fibronectin and tenascin-C. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 2013; 1832(4): 517 doi: 10.1016/j.bbadis.2013.01.003
|
49 |
Sigrun Eick, Malgorzata Pietkiewicz, Anton Sculean. Oral microbiota in Swiss adolescents. Clinical Oral Investigations 2013; 17(1): 79 doi: 10.1007/s00784-012-0696-2
|
50 |
Andressa Noronha Barbosa da Silva, Rita de Cássia Moreira de Souza, Nathan Ravi Medeiros Honorato, Rand Randall Martins, Antônia Claudia Jácome da Câmara, Lúcia Maria da Cunha Galvão, Egler Chiari. Comparison of phenol-chloroform and a commercial deoxyribonucleic acid extraction kit for identification of bloodmeal sources from triatomines (Hemiptera: Reduviidae). Revista da Sociedade Brasileira de Medicina Tropical 2020; 53 doi: 10.1590/0037-8682-0189-2020
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51 |
SONY SUHANDONO, INDAH BUDI UTARI. Isolation and Molecular Identification of Endophytic Bacteria from Durian Arillus (Durio zibethinus Murr.) var. Matahari. Microbiology Indonesia 2014; 8(4): 161 doi: 10.5454/mi.8.4.3
|
52 |
Paola M. Mwanamoki, Naresh Devarajan, Florian Thevenon, Emmanuel K. Atibu, Joseph B. Tshibanda, Patience Ngelinkoto, Pius T. Mpiana, Kandasamy Prabakar, Josué I. Mubedi, Christophe G. Kabele, Walter Wildi, John Poté. Assessment of pathogenic bacteria in water and sediment from a water reservoir under tropical conditions (Lake Ma Vallée), Kinshasa Democratic Republic of Congo. Environmental Monitoring and Assessment 2014; 186(10): 6821 doi: 10.1007/s10661-014-3891-6
|
53 |
Sharon A. Lynch. Development and Assessment of a Sensitive and Cost-Effective Polymerase Chain Reaction to Detect Ostreid Herpesvirus 1 and Variants. Journal of Shellfish Research 2013; 32(3): 657 doi: 10.2983/035.032.0305
|
54 |
Aniela Wozniak, Enrique Geoffroy, Carolina Miranda, Claudia Castillo, Francia Sanhueza, Patricia García. Comparison of manual and automated nucleic acid extraction methods from clinical specimens for microbial diagnosis purposes. Diagnostic Microbiology and Infectious Disease 2016; 86(3): 268 doi: 10.1016/j.diagmicrobio.2016.07.008
|
55 |
Kristina Bertl, Chiarra Geissberger, David Zinndorf, Pia Edlund Johansson, Hatem Al-Shammari, Sigrun Eick, Andreas Stavropoulos. Bacterial colonisation during regular daily use of a power-driven water flosser and risk for cross-contamination. Can it be prevented?. Clinical Oral Investigations 2022; 26(2): 1903 doi: 10.1007/s00784-021-04167-1
|
56 |
Nahal Hadi, Zhaleh Mahmoodi, Amir Emami, Yalda Malekzadegan, Tahereh Valadbeygi. Isolation and Molecular Identification of Aeromonas Wound Infection in Iranian Burn Patients. Infectious Disorders - Drug Targets 2019; 19(3): 269 doi: 10.2174/1871526518666180903165823
|
57 |
Sowmya Balasubramanian, Marcia S. Osburne, Haley BrinJones, Albert K. Tai, John M. Leong, Steven R. Blanke. Prophage induction, but not production of phage particles, is required for lethal disease in a microbiome-replete murine model of enterohemorrhagic E. coli infection. PLOS Pathogens 2019; 15(1): e1007494 doi: 10.1371/journal.ppat.1007494
|
58 |
Amira ElBaradei, Marwa Atef Yakout. Stenotrophomonas maltophilia: Genotypic Characterization of Virulence Genes and The Effect of Ascorbic Acid on Biofilm Formation. Current Microbiology 2022; 79(6) doi: 10.1007/s00284-022-02869-7
|
59 |
Hosein Heydari, Abolfazl Iranikhah, Ahmad Ghasemi, Abolfazl Mohammadbeigi, Seyed Ali Sadat-Mirei, Saeed Shams, Somayeh Kermani. Evaluation of the prevalence of Aeromonas spp., Campylobacter spp., and Clostridioides difficile in immunocompromised children with diarrhea. BMC Infectious Diseases 2024; 24(1) doi: 10.1186/s12879-024-09372-3
|
60 |
Sara Ghashghaei, Giti Emtiazi. Production of Calcite Nanocrystal by a Urease-Positive Strain of Enterobacter ludwigii and Study of Its Structure by SEM. Current Microbiology 2013; 67(4): 406 doi: 10.1007/s00284-013-0379-5
|
61 |
Sigrun Eick, Christoph A. Ramseier, Kathrin Rothenberger, Urs Brägger, Daniel Buser, Giovanni E. Salvi. Microbiota at teeth and implants in partially edentulous patients. A 10‐year retrospective study. Clinical Oral Implants Research 2016; 27(2): 218 doi: 10.1111/clr.12588
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62 |
Feng Wu, Biao Chen, Sha Liu, Xiongjian Xia, Liuling Gao, Xiaoyong Zhang, Qing Pan, Vijai Gupta. Effects of woody forages on biodiversity and bioactivity of aerobic culturable gut bacteria of tilapia (Oreochromis niloticus). PLOS ONE 2020; 15(7): e0235560 doi: 10.1371/journal.pone.0235560
|
63 |
Maryam Fanaei, Giti Emtiazi. Isolation of a new Pseudomonas halophila strain possess bacteriorhodopsin-like protein by a novel method for screening of photoactive protein producing bacteria. World Journal of Microbiology and Biotechnology 2014; 30(2): 585 doi: 10.1007/s11274-013-1453-7
|
64 |
Gna Ahn, Ga-Young Park, Dae-Young Park, Ok Chan Jeong, Yang-Hoon Kim, Ji-Young Ahn. Microalgae Direct Extract Reagent for Heterocapsa triquetra. Toxicology and Environmental Health Sciences 2019; 11(1): 73 doi: 10.1007/s13530-019-0390-8
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