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Cited by in F6Publishing
For: Jenkins C, Dallman TJ, Grant KA. Impact of whole genome sequencing on the investigation of food-borne outbreaks of Shiga toxin-producing Escherichia coli serogroup O157:H7, England, 2013 to 2017. Euro Surveill 2019;24. [PMID: 30696532 DOI: 10.2807/1560-7917.ES.2019.24.4.1800346] [Cited by in Crossref: 15] [Cited by in F6Publishing: 12] [Article Influence: 7.5] [Reference Citation Analysis]
Number Citing Articles
1 Armstrong GL, MacCannell DR, Taylor J, Carleton HA, Neuhaus EB, Bradbury RS, Posey JE, Gwinn M. Pathogen Genomics in Public Health. N Engl J Med 2019;381:2569-80. [PMID: 31881145 DOI: 10.1056/NEJMsr1813907] [Cited by in Crossref: 53] [Cited by in F6Publishing: 34] [Article Influence: 26.5] [Reference Citation Analysis]
2 Butt S, Allison L, Vishram B, Greig DR, Aird H, McDonald E, Drennan G, Jenkins C, Byrne L, Licence K, Smith-Palmer A; Incident Management Team. Epidemiological investigations identified an outbreak of Shiga toxin-producing Escherichia coli serotype O26:H11 associated with pre-packed sandwiches. Epidemiol Infect 2021;149:e178. [PMID: 34635196 DOI: 10.1017/S0950268821001576] [Reference Citation Analysis]
3 Butt S, Smith-Palmer A, Shand A, McDonald E, Allison L, Maund J, Fernandes A, Vishram B, Greig DR, Jenkins C, Elson R; Outbreak Control Team. Evidence of on-going transmission of Shiga toxin-producing Escherichia coli O157:H7 following a foodborne outbreak. Epidemiol Infect 2021;149:e147. [PMID: 34096488 DOI: 10.1017/S0950268821001278] [Reference Citation Analysis]
4 Zhang B, Brock M, Arana C, Dende C, van Oers NS, Hooper LV, Raj P. Impact of Bead-Beating Intensity on the Genus- and Species-Level Characterization of the Gut Microbiome Using Amplicon and Complete 16S rRNA Gene Sequencing. Front Cell Infect Microbiol 2021;11:678522. [PMID: 34660333 DOI: 10.3389/fcimb.2021.678522] [Reference Citation Analysis]
5 Moore MP, Wilcox MH, Walker AS, Eyre DW. K-mer based prediction of Clostridioides difficile relatedness and ribotypes. Microb Genom 2022;8. [PMID: 35384833 DOI: 10.1099/mgen.0.000804] [Reference Citation Analysis]
6 Wang LYR, Jokinen CC, Laing CR, Johnson RP, Ziebell K, Gannon VPJ. Assessing the genomic relatedness and evolutionary rates of persistent verotoxigenic Escherichia coli serotypes within a closed beef herd in Canada. Microb Genom 2020;6. [PMID: 32496181 DOI: 10.1099/mgen.0.000376] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
7 Greig DR, Jenkins C, Dallman TJ. A Shiga Toxin-Encoding Prophage Recombination Event Confounds the Phylogenetic Relationship Between Two Isolates of Escherichia coli O157:H7 From the Same Patient. Front Microbiol 2020;11:588769. [PMID: 33193248 DOI: 10.3389/fmicb.2020.588769] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
8 Koutsoumanis K, Allende A, Alvarez-Ordóñez A, Bolton D, Bover-Cid S, Chemaly M, Davies R, De Cesare A, Hilbert F, Lindqvist R, Nauta M, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Jenkins C, Malorny B, Ribeiro Duarte AS, Torpdahl M, da Silva Felício MT, Guerra B, Rossi M, Herman L; EFSA Panel on Biological Hazards (EFSA BIOHAZ Panel). Whole genome sequencing and metagenomics for outbreak investigation, source attribution and risk assessment of food-borne microorganisms. EFSA J 2019;17:e05898. [PMID: 32626197 DOI: 10.2903/j.efsa.2019.5898] [Cited by in Crossref: 19] [Cited by in F6Publishing: 21] [Article Influence: 6.3] [Reference Citation Analysis]
9 Gutiérrez S, Díaz L, Reyes-Jara A, Yang X, Meng J, González-Escalona N, Toro M. Whole-Genome Phylogenetic Analysis Reveals a Wide Diversity of Non-O157 STEC Isolated From Ground Beef and Cattle Feces. Front Microbiol 2020;11:622663. [PMID: 33584592 DOI: 10.3389/fmicb.2020.622663] [Reference Citation Analysis]
10 Dallman TJ, Greig DR, Gharbia SE, Jenkins C. Phylogenetic structure of Shiga toxin-producing Escherichia coli O157:H7 from sub-lineage to SNPs. Microb Genom 2021;7. [PMID: 33720818 DOI: 10.1099/mgen.0.000544] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
11 Greig DR, Jenkins C, Gharbia SE, Dallman TJ. Analysis of a small outbreak of Shiga toxin-producing Escherichia coli O157:H7 using long-read sequencing. Microb Genom 2021;7. [PMID: 33683192 DOI: 10.1099/mgen.0.000545] [Reference Citation Analysis]
12 Kaindama L, Jenkins C, Aird H, Jorgensen F, Stoker K, Byrne L. A cluster of Shiga Toxin-producing Escherichia coli O157:H7 highlights raw pet food as an emerging potential source of infection in humans. Epidemiol Infect 2021;149:e124. [PMID: 33955833 DOI: 10.1017/S0950268821001072] [Reference Citation Analysis]
13 Byrne L, Kaindama L, Bentley M, Jenkins C, Aird H, Oliver I, Paranthaman K; Incident Management Team. Investigation into a national outbreak of STEC O157:H7 associated with frozen beef burgers, UK, 2017. Epidemiol Infect 2020;148:e215. [PMID: 32669142 DOI: 10.1017/S0950268820001582] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 1.5] [Reference Citation Analysis]