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For: Sanaa M, Pouillot R, Vega FG, Strain E, Van Doren JM. GenomeGraphR: A user-friendly open-source web application for foodborne pathogen whole genome sequencing data integration, analysis, and visualization. PLoS One 2019;14:e0213039. [PMID: 30818354 DOI: 10.1371/journal.pone.0213039] [Cited by in Crossref: 13] [Cited by in F6Publishing: 10] [Article Influence: 4.3] [Reference Citation Analysis]
Number Citing Articles
1 Cabal A, Allerberger F, Huhulescu S, Kornschober C, Springer B, Schlagenhaufen C, Wassermann-Neuhold M, Fötschl H, Pless P, Krause R, Lennkh A, Murer A, Ruppitsch W, Pietzka A. Listeriosis outbreak likely due to contaminated liver pâté consumed in a tavern, Austria, December 2018. Euro Surveill 2019;24. [PMID: 31576804 DOI: 10.2807/1560-7917.ES.2019.24.39.1900274] [Cited by in Crossref: 5] [Cited by in F6Publishing: 2] [Article Influence: 2.5] [Reference Citation Analysis]
2 Collineau L, Boerlin P, Carson CA, Chapman B, Fazil A, Hetman B, McEwen SA, Parmley EJ, Reid-Smith RJ, Taboada EN, Smith BA. Integrating Whole-Genome Sequencing Data Into Quantitative Risk Assessment of Foodborne Antimicrobial Resistance: A Review of Opportunities and Challenges. Front Microbiol 2019;10:1107. [PMID: 31231317 DOI: 10.3389/fmicb.2019.01107] [Cited by in Crossref: 29] [Cited by in F6Publishing: 21] [Article Influence: 9.7] [Reference Citation Analysis]
3 Zhou Z, Charlesworth J, Achtman M. Accurate reconstruction of bacterial pan- and core genomes with PEPPAN. Genome Res 2020;30:1667-79. [PMID: 33055096 DOI: 10.1101/gr.260828.120] [Cited by in Crossref: 3] [Cited by in F6Publishing: 6] [Article Influence: 1.5] [Reference Citation Analysis]
4 Stessl B, Wagner M, Ruppitsch W. Multilocus Sequence Typing (MLST) and Whole Genome Sequencing (WGS) of Listeria monocytogenes and Listeria innocua. Methods Mol Biol 2021;2220:89-103. [PMID: 32975768 DOI: 10.1007/978-1-0716-0982-8_7] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
5 Zhou Z, Alikhan NF, Mohamed K, Fan Y, Achtman M; Agama Study Group. The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity. Genome Res 2020;30:138-52. [PMID: 31809257 DOI: 10.1101/gr.251678.119] [Cited by in Crossref: 156] [Cited by in F6Publishing: 129] [Article Influence: 52.0] [Reference Citation Analysis]
6 Radomski N, Cadel-Six S, Cherchame E, Felten A, Barbet P, Palma F, Mallet L, Le Hello S, Weill FX, Guillier L, Mistou MY. A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale - Application to Retrospective Salmonella Foodborne Outbreak Investigations. Front Microbiol 2019;10:2413. [PMID: 31708892 DOI: 10.3389/fmicb.2019.02413] [Cited by in Crossref: 5] [Cited by in F6Publishing: 4] [Article Influence: 1.7] [Reference Citation Analysis]
7 Egli A, Koch D, Danuser J, Hendriksen RS, Driesen S, Schmid DC, Neher R, Mäusezahl M, Seth-Smith HMB, Bloemberg G, Tschudin-Sutter S, Endimiani A, Perreten V, Greub G, Schrenzel J, Stephan R. Symposium report: One Health meets sequencing. Microbes Infect 2020;22:1-7. [PMID: 31401354 DOI: 10.1016/j.micinf.2019.07.004] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
8 Chen Y, Chen Y, Pouillot R, Dennis S, Xian Z, Luchansky JB, Porto-Fett ACS, Lindsay JA, Hammack TS, Allard M, Van Doren JM, Brown EW. Genetic diversity and profiles of genes associated with virulence and stress resistance among isolates from the 2010-2013 interagency Listeria monocytogenes market basket survey. PLoS One 2020;15:e0231393. [PMID: 32352974 DOI: 10.1371/journal.pone.0231393] [Cited by in Crossref: 9] [Cited by in F6Publishing: 11] [Article Influence: 4.5] [Reference Citation Analysis]
9 Timme RE, Wolfgang WJ, Balkey M, Venkata SLG, Randolph R, Allard M, Strain E. Optimizing open data to support one health: best practices to ensure interoperability of genomic data from bacterial pathogens. One Health Outlook 2020;2:20. [PMID: 33103064 DOI: 10.1186/s42522-020-00026-3] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 3.0] [Reference Citation Analysis]
10 Pietzka A, Allerberger F, Murer A, Lennkh A, Stöger A, Cabal Rosel A, Huhulescu S, Maritschnik S, Springer B, Lepuschitz S, Ruppitsch W, Schmid D. Whole Genome Sequencing Based Surveillance of L. monocytogenes for Early Detection and Investigations of Listeriosis Outbreaks. Front Public Health 2019;7:139. [PMID: 31214559 DOI: 10.3389/fpubh.2019.00139] [Cited by in Crossref: 16] [Cited by in F6Publishing: 14] [Article Influence: 5.3] [Reference Citation Analysis]
11 Bedla D, Halecki W, Król K. HYDROMORPHOLOGICAL METHOD AND GIS TOOLS WITH A WEB APPLICATION TO ASSESS A SEMI-NATURAL URBANISED RIVER. Journal of Environmental Engineering and Landscape Management 2021;29:21-32. [DOI: 10.3846/jeelm.2021.14187] [Cited by in Crossref: 3] [Article Influence: 3.0] [Reference Citation Analysis]