BPG is committed to discovery and dissemination of knowledge
Cited by in F6Publishing
For: Ruzicka L, Howe DG, Ramachandran S, Toro S, Van Slyke CE, Bradford YM, Eagle A, Fashena D, Frazer K, Kalita P, Mani P, Martin R, Moxon ST, Paddock H, Pich C, Schaper K, Shao X, Singer A, Westerfield M. The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources. Nucleic Acids Res 2019;47:D867-73. [PMID: 30407545 DOI: 10.1093/nar/gky1090] [Cited by in Crossref: 97] [Cited by in F6Publishing: 98] [Article Influence: 48.5] [Reference Citation Analysis]
Number Citing Articles
1 Prabhakara AM, Nanjappa DP, Kotian A, Kalladka K, Chakraborty G, Vittal R, Raj JRM, Deekshit VK, Chakraborty A. Wild-type and cancer-prone zebrafish exhibit distinct gut microbial diversity and differential anti-inflammatory response upon infection. J Biosci 2022;47:65. [DOI: 10.1007/s12038-022-00302-6] [Reference Citation Analysis]
2 Schultz B, Wehr M, Witters H, Escher S, Jacobs M. P01-03 Integration of adverse outcome pathways with knowledge graphs. Toxicology Letters 2022;368:S85. [DOI: 10.1016/j.toxlet.2022.07.247] [Reference Citation Analysis]
3 Demery-poulos C, Chambers JM. Identification, conservation, and expression of tiered pharmacogenes in zebrafish. PLoS ONE 2022;17:e0273582. [DOI: 10.1371/journal.pone.0273582] [Reference Citation Analysis]
4 Golden A, Starshin A, Mazur A, Mugue N, Kaplun D, Artemov A, Khrameeva E, Prokhortchouk E. Epigenetic variations are landmarks of freshwater adaptation in threespine sticklebacks.. [DOI: 10.1101/2022.08.22.504457] [Reference Citation Analysis]
5 Porretti M, Arrigo F, Di Bella G, Faggio C. Impact of pharmaceutical products on zebrafish: An effective tool to assess aquatic pollution. Comp Biochem Physiol C Toxicol Pharmacol 2022;261:109439. [PMID: 35961532 DOI: 10.1016/j.cbpc.2022.109439] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
6 Saunders LM, Srivatsan SR, Duran M, Dorrity MW, Ewing B, Linbo T, Shendure J, Raible DW, Moens CB, Kimelman D, Trapnell C. Deep molecular, cellular and temporal phenotyping of developmental perturbations at whole organism scale.. [DOI: 10.1101/2022.08.04.502764] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
7 Baranasic D, Hörtenhuber M, Balwierz PJ, Zehnder T, Mukarram AK, Nepal C, Várnai C, Hadzhiev Y, Jimenez-Gonzalez A, Li N, Wragg J, D'Orazio FM, Relic D, Pachkov M, Díaz N, Hernández-Rodríguez B, Chen Z, Stoiber M, Dong M, Stevens I, Ross SE, Eagle A, Martin R, Obasaju O, Rastegar S, McGarvey AC, Kopp W, Chambers E, Wang D, Kim HR, Acemel RD, Naranjo S, Łapiński M, Chong V, Mathavan S, Peers B, Sauka-Spengler T, Vingron M, Carninci P, Ohler U, Lacadie SA, Burgess SM, Winata C, van Eeden F, Vaquerizas JM, Gómez-Skarmeta JL, Onichtchouk D, Brown BJ, Bogdanovic O, van Nimwegen E, Westerfield M, Wardle FC, Daub CO, Lenhard B, Müller F. Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements. Nat Genet 2022. [PMID: 35789323 DOI: 10.1038/s41588-022-01089-w] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
8 Kalvaitytė M, Balciunas D. Conditional mutagenesis strategies in zebrafish. Trends Genet 2022:S0168-9525(22)00101-9. [PMID: 35662532 DOI: 10.1016/j.tig.2022.04.007] [Reference Citation Analysis]
9 Crow M, Suresh H, Lee J, Gillis J. Coexpression reveals conserved gene programs that co-vary with cell type across kingdoms. Nucleic Acids Res 2022:gkac276. [PMID: 35451481 DOI: 10.1093/nar/gkac276] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 5.0] [Reference Citation Analysis]
10 Doyle JM, Croll RP. A Critical Review of Zebrafish Models of Parkinson's Disease. Front Pharmacol 2022;13:835827. [PMID: 35370740 DOI: 10.3389/fphar.2022.835827] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
11 Fisher ME, Segerdell E, Matentzoglu N, Nenni MJ, Fortriede JD, Chu S, Pells TJ, Osumi-Sutherland D, Chaturvedi P, James-Zorn C, Sundararaj N, Lotay VS, Ponferrada V, Wang DZ, Kim E, Agalakov S, Arshinoff BI, Karimi K, Vize PD, Zorn AM. The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development. BMC Bioinformatics 2022;23:99. [PMID: 35317743 DOI: 10.1186/s12859-022-04636-8] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
12 Cao Y, Xia Y, Balowski JJ, Ou J, Song L, Safi A, Curtis T, Crawford GE, Poss KD, Cao J. Identification of enhancer regulatory elements that direct epicardial gene expression during zebrafish heart regeneration. Development 2022;149:dev200133. [PMID: 35179181 DOI: 10.1242/dev.200133] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 4.0] [Reference Citation Analysis]
13 Gao M, Veil M, Rosenblatt M, Riesle AJ, Gebhard A, Hass H, Buryanova L, Yampolsky LY, Grüning B, Ulianov SV, Timmer J, Onichtchouk D. Pluripotency factors determine gene expression repertoire at zygotic genome activation. Nat Commun 2022;13:788. [PMID: 35145080 DOI: 10.1038/s41467-022-28434-1] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
14 Niziolek M, Bicka M, Osinka A, Samsel Z, Sekretarska J, Poprzeczko M, Bazan R, Fabczak H, Joachimiak E, Wloga D. PCD Genes-From Patients to Model Organisms and Back to Humans. Int J Mol Sci 2022;23:1749. [PMID: 35163666 DOI: 10.3390/ijms23031749] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
15 Chowdhury K, Lin S, Lai S. Comparative Study in Zebrafish and Medaka Unravels the Mechanisms of Tissue Regeneration. Front Ecol Evol 2022;10:783818. [DOI: 10.3389/fevo.2022.783818] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 2.0] [Reference Citation Analysis]
16 Tsakoumis E, Ahi EP, Schmitz M. Impaired leptin signaling causes subfertility in female zebrafish. Molecular and Cellular Endocrinology 2022. [DOI: 10.1016/j.mce.2022.111595] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
17 Howard AGA, Nguyen AC, Tworig J, Ravisankar P, Singleton EW, Li C, Kotzur G, Waxman JS, Uribe RA. Elevated Hoxb5b Expands Vagal Neural Crest Pool and Blocks Enteric Neuronal Development in Zebrafish. Front Cell Dev Biol 2022;9:803370. [DOI: 10.3389/fcell.2021.803370] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
18 Wang H, Wang Y, Niu M, Hu L, Chen L. Cold Acclimation for Enhancing the Cold Tolerance of Zebrafish Cells. Front Physiol 2022;12:813451. [DOI: 10.3389/fphys.2021.813451] [Reference Citation Analysis]
19 Bellinger MR, Wei J, Hartmann U, Cadiou H, Winklhofer M, Banks MA. Conservation of magnetite biomineralization genes in all domains of life and implications for magnetic sensing. Proc Natl Acad Sci U S A 2022;119:e2108655119. [PMID: 35012979 DOI: 10.1073/pnas.2108655119] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 9.0] [Reference Citation Analysis]
20 Parey E, Louis A, Montfort J, Guiguen Y, Crollius HR, Berthelot C. An atlas of fish genome evolution reveals delayed rediploidization following the teleost whole-genome duplication.. [DOI: 10.1101/2022.01.13.476171] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
21 Burton DF, Boa-Amponsem OM, Dixon MS, Hopkins MJ, Herbin TA, Toney S, Tarpley M, Rodriguez BV, Fish EW, Parnell SE, Cole GJ, Williams KP. Pharmacological activation of the Sonic hedgehog pathway with a Smoothened small molecule agonist ameliorates the severity of alcohol-induced morphological and behavioral birth defects in a zebrafish model of fetal alcohol spectrum disorder. J Neurosci Res 2022. [PMID: 35014067 DOI: 10.1002/jnr.25008] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
22 Maciag M, Wnorowski A, Bednarz K, Plazinska A. Evaluation of β-adrenergic ligands for development of pharmacological heart failure and transparency models in zebrafish. Toxicol Appl Pharmacol 2022;434:115812. [PMID: 34838787 DOI: 10.1016/j.taap.2021.115812] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 4.0] [Reference Citation Analysis]
23 Mcgarvey AC, Kopp W, Vučićević D, Mattonet K, Kempfer R, Hirsekorn A, Bilić I, Gil M, Trinks A, Merks AM, Panáková D, Pombo A, Akalin A, Junker JP, Stainier DY, Garfield D, Ohler U, Lacadie SA. Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos. Cell Genomics 2022;2:100083. [DOI: 10.1016/j.xgen.2021.100083] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
24 Jones WD, Mullins MC. Cell signaling pathways controlling an axis organizing center in the zebrafish. Current Topics in Developmental Biology 2022. [DOI: 10.1016/bs.ctdb.2022.03.005] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
25 Sutton G, Kelsh RN, Scholpp S. Review: The Role of Wnt/β-Catenin Signalling in Neural Crest Development in Zebrafish. Front Cell Dev Biol 2021;9:782445. [PMID: 34912811 DOI: 10.3389/fcell.2021.782445] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
26 Liu Y, Kossack ME, Mcfaul ME, Christensen L, Siebert S, Wyatt SR, Kamei C, Horst S, Arroyo N, Drummond I, Juliano CE, Draper BW. Single-cell transcriptome reveals insights into the development and function of the zebrafish ovary.. [DOI: 10.1101/2021.12.01.470669] [Reference Citation Analysis]
27 Fisher ME, Segerdell E, Matentzoglu N, Nenni MJ, Fortriede JD, Chu S, Pells TJ, Chaturvedi P, James-zorn C, Sundararaj N, Lotay VS, Ponferrada V, Wang DZ, Kim E, Agalakov S, Arshinoff BI, Karimi K, Vize PD, Zorn AM. The Xenopus Phenotype Ontology: bridging model organism phenotype data to human health and development.. [DOI: 10.1101/2021.11.12.467727] [Reference Citation Analysis]
28 Adam Howard AG, Nguyen AC, Tworig J, Ravisankar P, Singleton EW, Li C, Kotzur G, Waxman JS, Uribe RA. Elevated Hoxb5b expands vagal neural crest pool and blocks enteric neuronal development in zebrafish.. [DOI: 10.1101/2021.10.28.466356] [Reference Citation Analysis]
29 Pir MS, Bilgin HI, Sayici A, Coşkun F, Torun FM, Zhao P, Kang Y, Cevik S, Kaplan OI. ConVarT: a search engine for matching human genetic variants with variants from non-human species. Nucleic Acids Res 2021:gkab939. [PMID: 34718716 DOI: 10.1093/nar/gkab939] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
30 Csabai L, Fazekas D, Kadlecsik T, Szalay-Bekő M, Bohár B, Madgwick M, Módos D, Ölbei M, Gul L, Sudhakar P, Kubisch J, Oyeyemi OJ, Liska O, Ari E, Hotzi B, Billes VA, Molnár E, Földvári-Nagy L, Csályi K, Demeter A, Pápai N, Koltai M, Varga M, Lenti K, Farkas IJ, Türei D, Csermely P, Vellai T, Korcsmáros T. SignaLink3: a multi-layered resource to uncover tissue-specific signaling networks. Nucleic Acids Res 2021:gkab909. [PMID: 34634810 DOI: 10.1093/nar/gkab909] [Cited by in Crossref: 3] [Cited by in F6Publishing: 5] [Article Influence: 3.0] [Reference Citation Analysis]
31 McMillen P, Oudin MJ, Levin M, Payne SL. Beyond Neurons: Long Distance Communication in Development and Cancer. Front Cell Dev Biol 2021;9:739024. [PMID: 34621752 DOI: 10.3389/fcell.2021.739024] [Cited by in F6Publishing: 2] [Reference Citation Analysis]
32 Hansen CL, Pelegri F. Primordial Germ Cell Specification in Vertebrate Embryos: Phylogenetic Distribution and Conserved Molecular Features of Preformation and Induction. Front Cell Dev Biol 2021;9:730332. [PMID: 34604230 DOI: 10.3389/fcell.2021.730332] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
33 Liau ES, Jin S, Chen Y, Liu W, Yong LW, Tsai C, Calon M, Yu J, Su Y, Nedelec S, Nie Q, Chen J. Single-cell transcriptomic analysis unveils spinal motor neuron subtype diversity underpinning the water-to-land transition in vertebrates.. [DOI: 10.1101/2021.09.29.462340] [Reference Citation Analysis]
34 Domingues WB, Silveira TLR, Nunes LS, Blodorn EB, Schneider A, Corcine CD, Varela Junior AS, Acosta IB, Kütter MT, Greif G, Robello C, Pinhal D, Marins LF, Campos VF. GH Overexpression Alters Spermatic Cells MicroRNAome Profile in Transgenic Zebrafish. Front Genet 2021;12:704778. [PMID: 34567067 DOI: 10.3389/fgene.2021.704778] [Cited by in Crossref: 2] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
35 Kunej T. Integrative Map of HIF1A Regulatory Elements and Variations. Genes (Basel) 2021;12:1526. [PMID: 34680921 DOI: 10.3390/genes12101526] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
36 Engel SR, Wong ED, Nash RS, Aleksander S, Alexander M, Douglass E, Karra K, Miyasato SR, Simison M, Skrzypek MS, Weng S, Cherry JM. New Data and Collaborations at the Saccharomyces Genome Database: Updated reference genome, alleles, and the Alliance of Genome Resources.. [DOI: 10.1101/2021.09.16.460706] [Reference Citation Analysis]
37 Huang LC, Taujale R, Gravel N, Venkat A, Yeung W, Byrne DP, Eyers PA, Kannan N. KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases. BMC Bioinformatics 2021;22:446. [PMID: 34537014 DOI: 10.1186/s12859-021-04358-3] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
38 Choe CP, Choi SY, Kee Y, Kim MJ, Kim SH, Lee Y, Park HC, Ro H. Transgenic fluorescent zebrafish lines that have revolutionized biomedical research. Lab Anim Res 2021;37:26. [PMID: 34496973 DOI: 10.1186/s42826-021-00103-2] [Cited by in Crossref: 7] [Cited by in F6Publishing: 8] [Article Influence: 7.0] [Reference Citation Analysis]
39 Beatman TR, Buckley KM, Cary GA, Hinman VF, Ettensohn CA. A nomenclature for echinoderm genes. Database (Oxford) 2021;2021:baab052. [PMID: 34386815 DOI: 10.1093/database/baab052] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
40 Baranasic D, Hörtenhuber M, Balwierz P, Zehnder T, Mukarram AK, Nepal C, Varnai C, Hadzhiev Y, Jimenez-gonzalez A, Li N, Wragg J, D’orazio F, Díaz N, Hernández-rodríguez B, Chen Z, Stoiber M, Dong M, Stevens I, Ross SE, Eagle A, Martin R, Obasaju P, Rastegar S, Mcgarvey AC, Kopp W, Chambers E, Wang D, Kim HR, Acemel RD, Naranjo S, Lapinski M, Chong V, Mathavan S, Peers B, Sauka-spengler T, Vingron M, Carninci P, Ohler U, Lacadie SA, Burgess S, Winata C, van Eeden F, Vaquerizas JM, Gómez-skarmeta JL, Onichtchouk D, Brown BJ, Bogdanovic O, Westerfield M, Wardle FC, Daub CO, Lenhard B, Müller F. Integrated annotation and analysis of genomic features reveal new types of functional elements and large-scale epigenetic phenomena in the developing zebrafish.. [DOI: 10.1101/2021.08.09.454869] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
41 Wang H, Robinson JL, Kocabas P, Gustafsson J, Anton M, Cholley PE, Huang S, Gobom J, Svensson T, Uhlen M, Zetterberg H, Nielsen J. Genome-scale metabolic network reconstruction of model animals as a platform for translational research. Proc Natl Acad Sci U S A 2021;118:e2102344118. [PMID: 34282017 DOI: 10.1073/pnas.2102344118] [Cited by in Crossref: 15] [Cited by in F6Publishing: 16] [Article Influence: 15.0] [Reference Citation Analysis]
42 Montero-Bullón JF, González-Velasco Ó, Isidoro-García M, Lacal J. Integrated in silico MS-based phosphoproteomics and network enrichment analysis of RASopathy proteins. Orphanet J Rare Dis 2021;16:303. [PMID: 34229750 DOI: 10.1186/s13023-021-01934-x] [Reference Citation Analysis]
43 Kishore R, Arnaboldi V, Van Slyke CE, Chan J, Nash RS, Urbano JM, Dolan ME, Engel SR, Shimoyama M, Sternberg PW, Genome Resources TAO. Automated generation of gene summaries at the Alliance of Genome Resources. Database (Oxford) 2020;2020:baaa037. [PMID: 32559296 DOI: 10.1093/database/baaa037] [Cited by in Crossref: 11] [Cited by in F6Publishing: 12] [Article Influence: 11.0] [Reference Citation Analysis]
44 Nalamalapu RR, Yue M, Stone AR, Murphy S, Saha MS. The tweety Gene Family: From Embryo to Disease. Front Mol Neurosci 2021;14:672511. [PMID: 34262434 DOI: 10.3389/fnmol.2021.672511] [Cited by in Crossref: 8] [Cited by in F6Publishing: 9] [Article Influence: 8.0] [Reference Citation Analysis]
45 Al-Thani HF, Shurbaji S, Yalcin HC. Zebrafish as a Model for Anticancer Nanomedicine Studies. Pharmaceuticals (Basel) 2021;14:625. [PMID: 34203407 DOI: 10.3390/ph14070625] [Cited by in Crossref: 2] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
46 Liu Q, Mishra M, Saxena AS, Wu H, Qiu Y, Zhang X, You X, Ding S, Miyamoto MM. Balancing selection maintains ancient polymorphisms at conserved enhancers for the olfactory receptor genes of a Chinese marine fish. Mol Ecol 2021;30:4023-38. [PMID: 34107131 DOI: 10.1111/mec.16016] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
47 Lawton E, Antczak P, Walker S, Germain-Cripps E, Falciani F, Routledge EJ. An investigation into the biological effects of indirect potable reuse water using zebrafish embryos. Sci Total Environ 2021;789:147981. [PMID: 34323829 DOI: 10.1016/j.scitotenv.2021.147981] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
48 Yates B, Gray KA, Jones TEM, Bruford EA. Updates to HCOP: the HGNC comparison of orthology predictions tool. Brief Bioinform 2021:bbab155. [PMID: 33959747 DOI: 10.1093/bib/bbab155] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 6.0] [Reference Citation Analysis]
49 Nowoshilow S, Fei JF, Voss SR, Tanaka EM, Murawala P. Gene and transgenics nomenclature for the laboratory axolotl-Ambystoma mexicanum. Dev Dyn 2021. [PMID: 33896069 DOI: 10.1002/dvdy.351] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 6.0] [Reference Citation Analysis]
50 Desvignes T, Sydes J, Montfort J, Bobe J, Postlethwait JH. Evolution after Whole-Genome Duplication: Teleost MicroRNAs. Mol Biol Evol 2021;38:3308-31. [PMID: 33871629 DOI: 10.1093/molbev/msab105] [Cited by in Crossref: 14] [Cited by in F6Publishing: 16] [Article Influence: 14.0] [Reference Citation Analysis]
51 Marchione AD, Thompson Z, Kathrein KL. DNA methylation and histone modifications are essential for regulation of stem cell formation and differentiation in zebrafish development. Brief Funct Genomics 2021:elab022. [PMID: 33782688 DOI: 10.1093/bfgp/elab022] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
52 Flanagan SP, Rose E, Jones AG. The population genomics of repeated freshwater colonizations by Gulf pipefish. Mol Ecol 2021;30:1672-87. [PMID: 33580570 DOI: 10.1111/mec.15841] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
53 Caufield JH, Sigdel D, Fu J, Choi H, Guevara-Gonzalez V, Wang D, Ping P. Cardiovascular Informatics: building a bridge to data harmony. Cardiovasc Res 2021:cvab067. [PMID: 33751044 DOI: 10.1093/cvr/cvab067] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
54 Huang L, Taujale R, Gravel N, Venkat A, Yeung W, Byrne DP, Eyers PA, Kannan N. KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases.. [DOI: 10.1101/2021.03.05.434161] [Reference Citation Analysis]
55 Colgan TJ, Moran PA, Archer LC, Wynne R, Hutton SA, McGinnity P, Reed TE. Evolution and Expression of the Immune System of a Facultatively Anadromous Salmonid. Front Immunol 2021;12:568729. [PMID: 33717060 DOI: 10.3389/fimmu.2021.568729] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
56 Howard AG 4th, Baker PA, Ibarra-García-Padilla R, Moore JA, Rivas LJ, Tallman JJ, Singleton EW, Westheimer JL, Corteguera JA, Uribe RA. An atlas of neural crest lineages along the posterior developing zebrafish at single-cell resolution. Elife 2021;10:e60005. [PMID: 33591267 DOI: 10.7554/eLife.60005] [Cited by in Crossref: 21] [Cited by in F6Publishing: 24] [Article Influence: 21.0] [Reference Citation Analysis]
57 Baldarelli RM, Smith CM, Finger JH, Hayamizu TF, McCright IJ, Xu J, Shaw DR, Beal JS, Blodgett O, Campbell J, Corbani LE, Frost PJ, Giannatto SC, Miers DB, Kadin JA, Richardson JE, Ringwald M. The mouse Gene Expression Database (GXD): 2021 update. Nucleic Acids Res 2021;49:D924-31. [PMID: 33104772 DOI: 10.1093/nar/gkaa914] [Cited by in Crossref: 17] [Cited by in F6Publishing: 18] [Article Influence: 17.0] [Reference Citation Analysis]
58 Gurumayum S, Jiang P, Hao X, Campos TL, Young ND, Korhonen PK, Gasser RB, Bork P, Zhao XM, He LJ, Chen WH. OGEE v3: Online GEne Essentiality database with increased coverage of organisms and human cell lines. Nucleic Acids Res 2021;49:D998-D1003. [PMID: 33084874 DOI: 10.1093/nar/gkaa884] [Cited by in Crossref: 17] [Cited by in F6Publishing: 18] [Article Influence: 17.0] [Reference Citation Analysis]
59 Hu Y, Comjean A, Rodiger J, Liu Y, Gao Y, Chung V, Zirin J, Perrimon N, Mohr SE. FlyRNAi.org-the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update. Nucleic Acids Res 2021;49:D908-15. [PMID: 33104800 DOI: 10.1093/nar/gkaa936] [Cited by in Crossref: 10] [Cited by in F6Publishing: 10] [Article Influence: 10.0] [Reference Citation Analysis]
60 Head B, Ramsey SA, Kioussi C, Tanguay RL, Traber MG. Vitamin E Deficiency Disrupts Gene Expression Networks during Zebrafish Development. Nutrients 2021;13:468. [PMID: 33573233 DOI: 10.3390/nu13020468] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 9.0] [Reference Citation Analysis]
61 RNAcentral Consortium. RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Res 2021;49:D212-20. [PMID: 33106848 DOI: 10.1093/nar/gkaa921] [Cited by in Crossref: 61] [Cited by in F6Publishing: 69] [Article Influence: 61.0] [Reference Citation Analysis]
62 Sezerman U, Bozkurt T, Sadife Isleyen F. Integrating Evolutionary Genetics to Medical Genomics: Evolutionary Approaches to Investigate Disease-Causing Variants. Methods in Molecular Medicine 2021. [DOI: 10.5772/intechopen.92738] [Reference Citation Analysis]
63 Prill K, Dawson JF. Homology-Directed Repair in Zebrafish: Witchcraft and Wizardry? Front Mol Biosci 2020;7:595474. [PMID: 33425990 DOI: 10.3389/fmolb.2020.595474] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
64 Noel NCL, MacDonald IM, Allison WT. Zebrafish Models of Photoreceptor Dysfunction and Degeneration. Biomolecules 2021;11:78. [PMID: 33435268 DOI: 10.3390/biom11010078] [Cited by in Crossref: 7] [Cited by in F6Publishing: 9] [Article Influence: 7.0] [Reference Citation Analysis]
65 Pir MS, Bilgin HI, Sayici A, Coşkun F, Torun FM, Zhao P, Kang Y, Cevik S, Kaplan OI. ConVarT: a search engine for matching human genetic variants with variants from non-human species.. [DOI: 10.1101/2021.01.07.424951] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
66 Gomez JA, Primm TP. A Slimy Business: the Future of Fish Skin Microbiome Studies. Microb Ecol 2021;82:275-87. [PMID: 33410931 DOI: 10.1007/s00248-020-01648-w] [Cited by in Crossref: 7] [Cited by in F6Publishing: 4] [Article Influence: 7.0] [Reference Citation Analysis]
67 Gonzaga-jauregui C, Zepeda Mendoza CJ. Genomic sequencing of rare diseases. Genomics of Rare Diseases 2021. [DOI: 10.1016/b978-0-12-820140-4.00001-6] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
68 Gonzaga-jauregui C. Challenges and opportunities in rare diseases research. Genomics of Rare Diseases 2021. [DOI: 10.1016/b978-0-12-820140-4.00013-2] [Reference Citation Analysis]
69 Fuhrmann JF, Buono L, Adelmann L, Martinez-Morales JR, Centanin L. Genetic developmental timing revealed by inter-species transplantations in fish. Development 2020;147:dev192500. [PMID: 33033120 DOI: 10.1242/dev.192500] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 3.5] [Reference Citation Analysis]
70 Crow M, Suresh H, Lee J, Gillis J. Coexpression reveals conserved mechanisms of transcriptional cell identity.. [DOI: 10.1101/2020.11.10.375758] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
71 Falk MJ. The pursuit of precision mitochondrial medicine: Harnessing preclinical cellular and animal models to optimize mitochondrial disease therapeutic discovery. J Inherit Metab Dis 2021;44:312-24. [PMID: 33006762 DOI: 10.1002/jimd.12319] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 3.0] [Reference Citation Analysis]
72 Bruford EA, Braschi B, Denny P, Jones TEM, Seal RL, Tweedie S. Guidelines for human gene nomenclature. Nat Genet 2020;52:754-8. [PMID: 32747822 DOI: 10.1038/s41588-020-0669-3] [Cited by in Crossref: 85] [Cited by in F6Publishing: 86] [Article Influence: 42.5] [Reference Citation Analysis]
73 Trigueiro NSS, Canedo A, Braga DLS, Luchiari AC, Rocha TL. Zebrafish as an Emerging Model System in the Global South: Two Decades of Research in Brazil. Zebrafish 2020;17:412-25. [PMID: 33090089 DOI: 10.1089/zeb.2020.1930] [Cited by in Crossref: 13] [Cited by in F6Publishing: 13] [Article Influence: 6.5] [Reference Citation Analysis]
74 Gaudin R, Goetz JG. Tracking Mechanisms of Viral Dissemination In Vivo. Trends Cell Biol 2021;31:17-23. [PMID: 33023793 DOI: 10.1016/j.tcb.2020.09.005] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 3.5] [Reference Citation Analysis]
75 Polymenis M. Ribosomal proteins: mutant phenotypes by the numbers and associated gene expression changes. Open Biol 2020;10:200114. [PMID: 32810425 DOI: 10.1098/rsob.200114] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 3.5] [Reference Citation Analysis]
76 Ichino N, Serres MR, Urban RM, Urban MD, Treichel AJ, Schaefbauer KJ, Greif LE, Varshney GK, Skuster KJ, McNulty MS, Daby CL, Wang Y, Liao HK, El-Rass S, Ding Y, Liu W, Anderson JL, Wishman MD, Sabharwal A, Schimmenti LA, Sivasubbu S, Balciunas D, Hammerschmidt M, Farber SA, Wen XY, Xu X, McGrail M, Essner JJ, Burgess SM, Clark KJ, Ekker SC. Building the vertebrate codex using the gene breaking protein trap library. Elife 2020;9:e54572. [PMID: 32779569 DOI: 10.7554/eLife.54572] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 3.0] [Reference Citation Analysis]
77 Ma X, Su B, Tian Y, Backenstose NJC, Ye Z, Moss A, Duong TY, Wang X, Dunham RA. Deep Transcriptomic Analysis Reveals the Dynamic Developmental Progression during Early Development of Channel Catfish (Ictalurus punctatus). Int J Mol Sci 2020;21:E5535. [PMID: 32748829 DOI: 10.3390/ijms21155535] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
78 Can H, Chanumolu SK, Gonzalez-Muñoz E, Prukudom S, Otu HH, Cibelli JB. Comparative analysis of single-cell transcriptomics in human and Zebrafish oocytes. BMC Genomics 2020;21:471. [PMID: 32640983 DOI: 10.1186/s12864-020-06860-z] [Cited by in Crossref: 7] [Cited by in F6Publishing: 8] [Article Influence: 3.5] [Reference Citation Analysis]
79 Potter G, Smith AS, Vo NT, Muster J, Weston W, Bertero A, Maves L, Mack DL, Rostain A. A More Open Approach Is Needed to Develop Cell-Based Fish Technology: It Starts with Zebrafish. One Earth 2020;3:54-64. [DOI: 10.1016/j.oneear.2020.06.005] [Cited by in Crossref: 13] [Cited by in F6Publishing: 15] [Article Influence: 6.5] [Reference Citation Analysis]
80 Lu G, Luo M. Genomes of major fishes in world fisheries and aquaculture: Status, application and perspective. Aquaculture and Fisheries 2020;5:163-73. [DOI: 10.1016/j.aaf.2020.05.004] [Cited by in Crossref: 12] [Cited by in F6Publishing: 14] [Article Influence: 6.0] [Reference Citation Analysis]
81 Howard AG, Baker PA, Ibarra-garcía-padilla R, Moore JA, Rivas LJ, Tallman JJ, Singleton EW, Westheimer JL, Corteguera JA, Uribe RA. An atlas of neural crest lineages along the posterior developing zebrafish at single-cell resolution.. [DOI: 10.1101/2020.06.14.150938] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
82 Nowoshilow S, Tanaka EM. Introducing www.axolotl-omics.org - an integrated -omics data portal for the axolotl research community. Exp Cell Res 2020;394:112143. [PMID: 32540400 DOI: 10.1016/j.yexcr.2020.112143] [Cited by in Crossref: 11] [Cited by in F6Publishing: 6] [Article Influence: 5.5] [Reference Citation Analysis]
83 Alliance of Genome Resources Consortium. Alliance of Genome Resources Portal: unified model organism research platform. Nucleic Acids Res 2020;48:D650-8. [PMID: 31552413 DOI: 10.1093/nar/gkz813] [Cited by in Crossref: 98] [Cited by in F6Publishing: 110] [Article Influence: 49.0] [Reference Citation Analysis]
84 Mandic M, Best C, Perry SF. Loss of hypoxia-inducible factor 1α affects hypoxia tolerance in larval and adult zebrafish (Danio rerio). Proc Biol Sci 2020;287:20200798. [PMID: 32453991 DOI: 10.1098/rspb.2020.0798] [Cited by in Crossref: 11] [Cited by in F6Publishing: 12] [Article Influence: 5.5] [Reference Citation Analysis]
85 Wang J, Mao D, Fazal F, Kim SY, Yamamoto S, Bellen H, Liu Z. Using MARRVEL v1.2 for Bioinformatics Analysis of Human Genes and Variant Pathogenicity. Curr Protoc Bioinformatics 2019;67:e85. [PMID: 31524990 DOI: 10.1002/cpbi.85] [Cited by in Crossref: 7] [Cited by in F6Publishing: 8] [Article Influence: 3.5] [Reference Citation Analysis]
86 Rigden DJ, Fernández XM. The 26th annual Nucleic Acids Research database issue and Molecular Biology Database Collection. Nucleic Acids Res 2019;47:D1-7. [PMID: 30626175 DOI: 10.1093/nar/gky1267] [Cited by in Crossref: 26] [Cited by in F6Publishing: 26] [Article Influence: 13.0] [Reference Citation Analysis]
87 Haindl R, Deloria AJ, Sturtzel C, Sattmann H, Rohringer W, Fischer B, Andreana M, Unterhuber A, Schwerte T, Distel M, Drexler W, Leitgeb R, Liu M. Functional optical coherence tomography and photoacoustic microscopy imaging for zebrafish larvae. Biomed Opt Express 2020;11:2137-51. [PMID: 32341872 DOI: 10.1364/BOE.390410] [Cited by in Crossref: 18] [Cited by in F6Publishing: 19] [Article Influence: 9.0] [Reference Citation Analysis]
88 Zhang S, Reljić B, Liang C, Kerouanton B, Francisco JC, Peh JH, Mary C, Jagannathan NS, Olexiouk V, Tang C, Fidelito G, Nama S, Cheng RK, Wee CL, Wang LC, Duek Roggli P, Sampath P, Lane L, Petretto E, Sobota RM, Jesuthasan S, Tucker-Kellogg L, Reversade B, Menschaert G, Sun L, Stroud DA, Ho L. Mitochondrial peptide BRAWNIN is essential for vertebrate respiratory complex III assembly. Nat Commun 2020;11:1312. [PMID: 32161263 DOI: 10.1038/s41467-020-14999-2] [Cited by in Crossref: 48] [Cited by in F6Publishing: 49] [Article Influence: 24.0] [Reference Citation Analysis]
89 Farr GH, Li B, Risolino M, Johnson NM, Yao Z, Kao RM, Majesky MW, Tapscott SJ, Selleri L, Maves L. Evolutionarily conserved regulation of embryonic fast-twitch skeletal muscle differentiation by Pbx factors.. [DOI: 10.1101/2020.02.21.960484] [Reference Citation Analysis]
90 Gao M, Veil M, Rosenblatt M, Riesle AJ, Gebhard A, Hass H, Buryanova L, Yampolsky LY, Grüning B, Ulianov SV, Timmer J, Onichtchouk D. Pluripotency factors determine gene expression repertoire at zygotic genome activation.. [DOI: 10.1101/2020.02.16.949362] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
91 Gebauer JM, Naba A. The Matrisome of Model Organisms: From In-Silico Prediction to Big-Data Annotation. Extracellular Matrix Omics 2020. [DOI: 10.1007/978-3-030-58330-9_2] [Cited by in Crossref: 2] [Article Influence: 1.0] [Reference Citation Analysis]
92 [DOI: 10.1101/2020.06.26.173377] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Reference Citation Analysis]