Byeon H. Best early-onset Parkinson dementia predictor using ensemble learning among Parkinson's symptoms, rapid eye movement sleep disorder, and neuropsychological profile. World J Psychiatr 2020; 10(11): 245-259 [PMID: 33269221 DOI: 10.5498/wjp.v10.i11.245]
Corresponding Author of This Article
Haewon Byeon, DSc, PhD, Professor, Department of Medical Big Data, College of AI Convergence, Inje University, Gimhae 50834, Gyeonsangnamdo, South Korea. bhwpuma@naver.com
Research Domain of This Article
Psychiatry
Article-Type of This Article
Case Control Study
Open-Access Policy of This Article
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World J Psychiatr. Nov 19, 2020; 10(11): 245-259 Published online Nov 19, 2020. doi: 10.5498/wjp.v10.i11.245
Table 1 Measurement and definition of variables
Variable
Measurement
Characteristics
Sociodemographic factors
Age
Continuous variable
Gender
Male or female
Education
Middle school graduate and below or high school graduate and above
Mainly used hand
Left hand, right hand, or both hands
Family dementia history
Yes or No
Family PD history
Yes or No
Environmental factors
Exposure to pesticide
Never, currently not exposed but exposed previously, or currently exposed to pesticide
Health behaviors
Pack-years
Non-smoking, 1-20, 21-40, 41-60, or ≥ 61 pack-years
Coffee-drinking
Yes or No
Mean coffee intake per day (cups/d)
No, ≤ 1, 2-3, or ≥ 4 cups
Coffee drinking period (yr)
No, ≤ 5, 6-9, or ≥ 10
Disease history
Carbon monoxide poisoning
Yes or No
Manganese poisoning
Yes or No
Encephalitis
Yes or No
Traumatic brain injury
Yes or No
Stroke
Yes or No
Alcoholism
Yes or No
Diabetes
Yes or No
Hypertension
Yes or No
Hyperlipidemia
Yes or No
Atrial fibrillation
Yes or No
Neuropsychological characteristics
Total score of KMMSE
Continuous variable
Total score of KMoCA
Global CDR score
Sum of boxes in CDR
K-IADL
Total score of UPDRS
Motor score of UPDRS
H&Y staging
Schwab & England ADL
Sleep behavior disorders
REM sleep behavior disorders
Yes or No
Exercise characteristics related to PD (PD related motor signs)
Tremor
Yes or No
Rigidity
Yes or No
Bradykinesia
Yes or No
Postural instability
Yes or No
LMC
Yes or No
Table 2 General characteristics of the subjects (n = 342)
Characteristics
n (%)
Age, mean ± SD (yr)
57.3 ± 5.7
K-MMSE, mean ± SD
25.6 ± 4.0
K-MoCA, mean ± SD
21.2 ± 5.1
Global CDR score, mean ± SD
0.4 ± 0.3
Sum of boxes in CDR, mean ± SD
1.5 ± 1.7
K-IADL, mean ± SD
1.0 ± 2.4
Total score of UPDRS, mean ± SD
41.3 ± 21.8
Motor score of UPDRS, mean ± SD
23.1 ± 11.1
H&Y staging, mean ± SD
2.3 ± 0.6
Schwab & England ADL, mean ± SD
77.5 ± 15.0
Gender
Male
174 (50.9)
Female
168 (49.1)
Education
Middle school graduate and below
195 (57.0)
High school graduate and above
147 (43.0)
Handness
Right
318 (93.0)
Left
15 (4.4)
Both hands
9 (2.6)
Family PD history
No
279 (94.9)
Yes
15 (5.1)
Family dementia history
No
264 (92.6)
Yes
21 (7.4)
Smoking (pack year)
1-20
18 (7.9)
21-40
9 (2.6)
41-60
3 (0.9)
61+
303 (88.6)
Coffee consumption
No
174 (50.9)
Yes
168 (49.1)
Carbon monoxide poisoning
No
294 (93.3)
Yes
21 (6.7)
Traumatic brain injury
No
306 (97.1)
Yes
9 (2.9)
Diabetes
No
276 (82.3)
Yes
60 (17.7)
Hypertension
No
249 (73.5)
Yes
90 (26.5)
Hyperlipidemia
No
303 (89.4)
Yes
36 (10.6)
Atrial fibrillation
No
336 (99.1)
Yes
3 (0.9)
Tremor
No
120 (36.0)
Yes
213 (64.0)
Rigidity
No
24 (7.2)
Yes
309 (92.8)
Bradykinesia
No
21 (6.3)
Yes
312 (93.7)
Postural instability
No
159 (50.5)
Yes
156 (49.5)
REM sleep behavior disorders
No
195 (61.3)
Yes
123 (38.7)
Late motor complications
Only ON-OFF/Wearing OFF
57 (17.9)
Only levodopa-induced dyskinesia
12 (3.8)
Both ON-OFF/Wearing OFF and levodopa-induced dyskinesia are present
48 (15.1)
Both ON-OFF/Wearing OFF and levodopa-induced dyskinesia are absent
201 (63.2)
Depression
No
147 (67.1)
Yes
72 (32.9)
Table 3 Error of Out-Of-Bag
Mtry (n)
Error of Out-Of-Bag
3
0.140
4
0.105
5
0.149
6
0.132
7
0.140
8
0.123
9
0.149
10
0.123
11
0.140
12
0.158
13
0.149
Table 4 The normalized importance of variables in the random forest model
Variables
Mean decrease Gini
K-MMSE
7.224
K-MoCA
2.992
Sum of boxes in CDR score
2.872
Global CDR score
2.304
Motor UPDRS
2.104
K-IADL
1.720
Total UPDRS
1.587
Schwab & England ADL
1.258
H&Y staging
1.040
Late motor complications
0.775
Consumption of coffee
0.699
Education level
0.527
Pack year
0.505
BDI
0.409
Tremor
0.338
Postural instability
0.338
Rigidity
0.331
Gender
0.255
REM sleep behavior disorders
0.249
Hypertension
0.168
Handness
0.151
Diabetes
0.146
Hyperlipidemia
0.129
Carbon monoxide poisoning
0.124
Family PD history
0.074
Family dementia history
0.066
Bradykinesia
0.034
Manganese poisoning
0.013
Traumatic brain injury
0.002
Atrial fibrillation
< 0.001
Citation: Byeon H. Best early-onset Parkinson dementia predictor using ensemble learning among Parkinson's symptoms, rapid eye movement sleep disorder, and neuropsychological profile. World J Psychiatr 2020; 10(11): 245-259