Basic Study
Copyright ©The Author(s) 2023.
World J Diabetes. Aug 15, 2023; 14(8): 1234-1248
Published online Aug 15, 2023. doi: 10.4239/wjd.v14.i8.1234
Table 1 Sequences of miR-503 mimic/inhibitor
miRNA
Sequence (5’-3’)
miR-503 mimicTAGCAGCGGGAACAGTACTGCAG
miR-503 mimic NCGACAGAGACACGAGCGGCTGTAT
miR-503 inhibitorCTGCAGTACTGTTCCCGCTGCTA
miR-503 inhibitor NCTAGTAACCGTCTTTCCCCTGGGC
Table 2 Reverse transcription-quantitative polymerase chain reaction primers
Primer
Sequence (5’-3’)
miR-151-3p-FACACTCCAGCTGGGCUAGACUGAGGCUCC
miR-151-3p-RCTCAACTGGTGTCGTGGA
miR-19b-3p-FACACTCCAGCTGGGUGUGCAAAUCCAUGCAA
miR-19b-3p-RCTCAACTGGTGTCGTGGA
miR-106b-5p-FACACTCCAGCTGGGUAAAGUGCUGACAGU
miR-106b-5p-RCTCAACTGGTGTCGTGGA
miR-30e-5p-FACACTCCAGCTGGGUGUAAACAUCCUUGAC
miR-30e-5p-RCTCAACTGGTGTCGTGGA
miR-122-5p-FACACTCCAGCTGGGUGGAGUGUGACAAUGG
miR-122-5p-RCTCAACTGGTGTCGTGGA
miR-29a-3p-FACACTCCAGCTGGGUAGCACCAUCUGAAAU
miR-29a-3p-RCTCAACTGGTGTCGTGGA
miR-29c-3p-FACACTCCAGCTGGGUAGCACCAUUUGAAAU
miR-29c-3p-RCTCAACTGGTGTCGTGGA
miR-497-5p-FACACTCCAGCTGGGCAGCAGCACACUGUGG
miR-497-5p-RCTCAACTGGTGTCGTGGA
miR-101a-3p-FACACTCCAGCTGGGUACAGUACUGUGAUA
miR-101a-3p-RCTCAACTGGTGTCGTGGA
miR-741-3p-FACACTCCAGCTGGGAAAGAUGCCACGCUAU
miR-741-3p-RCTCAACTGGTGTCGTGGA
miR-503-FACACTCCAGCTGGGTAGCAGCGGGAACAGTA
miR-503-RCTCAACTGGTGTCGTGGA
miR-671-FACACTCCAGCTGGGUCCGGUUCUCAGGGC
miR-671-RCTCAACTGGTGTCGTGGA
U6-FCTCGCTTCGGCAGCACA
U6-RAACGCTTCACGAATTTGCGT
SIRT4-FTCCTGGGAGTGGACAGAATGA
SIRT4-RCTGTGGATCCATGGGAACGC
Caspase 12-FTGCCAATTCCGACAAACAGC
Caspase 12-RCTGGATTCCCTGAGGAACTGT
GRP78-FAACCCAGATGAGGCTGTAGCA
GRP78-RACATCAAGCAGAACCAGGTCAC
CHOP-FCCAGCAGAGGTCACAAGCAC
CHOP-RCGCACTGACCACTCTGTTTC
β-actin-FCACCCGCGAGTACAACCTTC
β-actin-RCCCATACCCACCATCACACC
Table 3 Detection of 12 differentially expressed miRNAs between diabetes mellitus rats and normal rats by miRNA sequencing
miRNA_id
Log2 FC
P value
rno-miR-151-3p> 1.0< 0.001
rno-miR-19b-3p< -1.0< 0.001
rno-miR-106b-5p< -1.0< 0.001
rno-miR-30e-5p< -1.0< 0.001
rno-miR-122-5p> 1.0< 0.001
rno-miR-29a-3p< -1.0< 0.001
rno-miR-29c-3p< -1.0< 0.001
rno-miR-497-5p< -1.0< 0.001
rno-miR-101a-3p< -1.0< 0.001
rno-miR-741-3p> 1.0< 0.001
rno-miR-503< -1.0< 0.001
rno-miR-671> 1.0< 0.001
Table 4 Identification of mRNAs that may bind to miR-503 by sequencing results combined with the miRDB database
No.
Gene_id
1SLC12A1
2SIRT4
3MLYCD
4FBXL22
5CCND1
6MAP2K1
7PCP4
8RPS6KA3
9EMC6
10PPFIA3
11TTC17
12RAB11FIP1
13GALNT2
14NCS1
15APLN
16CEP85L
17CLSTN1
18KIF1C
19PIGQ
20BTRC
21LOC691995
22EGLN3
23NABP1