BPG is committed to discovery and dissemination of knowledge
Cited by in F6Publishing
For: Wang WL, Xu SY, Ren ZG, Tao L, Jiang JW, Zheng SS. Application of metagenomics in the human gut microbiome. World J Gastroenterol 2015; 21(3): 803-814 [PMID: 25624713 DOI: 10.3748/wjg.v21.i3.803] [Cited by in CrossRef: 174] [Cited by in F6Publishing: 127] [Article Influence: 24.9] [Reference Citation Analysis]
Number Citing Articles
1 Ortigão R, Pimentel-Nunes P, Dinis-Ribeiro M, Libânio D. Gastrointestinal Microbiome - What We Need to Know in Clinical Practice. GE Port J Gastroenterol 2020;27:336-51. [PMID: 32999906 DOI: 10.1159/000505036] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
2 Iqbal S, Quigley EMM. Progress in Our Understanding of the Gut Microbiome: Implications for the Clinician. Curr Gastroenterol Rep 2016;18. [DOI: 10.1007/s11894-016-0524-y] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 1.2] [Reference Citation Analysis]
3 Agioutantis P, Koumandou VL. Bioenergetic diversity of the human gut microbiome. Meta Gene 2018;16:10-4. [DOI: 10.1016/j.mgene.2017.12.007] [Cited by in Crossref: 6] [Cited by in F6Publishing: 1] [Article Influence: 1.5] [Reference Citation Analysis]
4 Wang JK, Yao SK. Roles of Gut Microbiota and Metabolites in Pathogenesis of Functional Constipation. Evid Based Complement Alternat Med 2021;2021:5560310. [PMID: 34603471 DOI: 10.1155/2021/5560310] [Reference Citation Analysis]
5 Wu X, Zhang H, Chen J, Shang S, Yan J, Chen Y, Tang X, Zhang H. Analysis and comparison of the wolf microbiome under different environmental factors using three different data of Next Generation Sequencing. Sci Rep 2017;7:11332. [PMID: 28900198 DOI: 10.1038/s41598-017-11770-4] [Cited by in Crossref: 28] [Cited by in F6Publishing: 26] [Article Influence: 5.6] [Reference Citation Analysis]
6 Wissenbach DK, Oliphant K, Rolle-Kampczyk U, Yen S, Höke H, Baumann S, Haange SB, Verdu EF, Allen-Vercoe E, von Bergen M. Optimization of metabolomics of defined in vitro gut microbial ecosystems. Int J Med Microbiol 2016;306:280-9. [PMID: 27020116 DOI: 10.1016/j.ijmm.2016.03.007] [Cited by in Crossref: 20] [Cited by in F6Publishing: 18] [Article Influence: 3.3] [Reference Citation Analysis]
7 Meedt E, Hiergeist A, Gessner A, Dettmer K, Liebisch G, Ghimire S, Poeck H, Edinger M, Wolff D, Herr W, Holler E, Weber D. Prolonged suppression of butyrate producing bacteria is associated with acute gastrointestinal graft-versus-host disease and transplant related mortality after allogeneic stem cell transplantation. Clin Infect Dis 2021:ciab500. [PMID: 34043764 DOI: 10.1093/cid/ciab500] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
8 Tyagi A, Singh B, Billekallu Thammegowda NK, Singh NK. Shotgun metagenomics offers novel insights into taxonomic compositions, metabolic pathways and antibiotic resistance genes in fish gut microbiome. Arch Microbiol 2019;201:295-303. [DOI: 10.1007/s00203-018-1615-y] [Cited by in Crossref: 22] [Cited by in F6Publishing: 15] [Article Influence: 7.3] [Reference Citation Analysis]
9 Rezasoltani S, Ahmadi Bashirzadeh D, Nazemalhosseini Mojarad E, Asadzadeh Aghdaei H, Norouzinia M, Shahrokh S. Signature of Gut Microbiome by Conventional and Advanced Analysis Techniques: Advantages and Disadvantages. Middle East J Dig Dis 2020;12:5-11. [PMID: 32082515 DOI: 10.15171/mejdd.2020.157] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 2.0] [Reference Citation Analysis]
10 Ruiz L, Hidalgo C, Blanco-míguez A, Lourenço A, Sánchez B, Margolles A. Tackling probiotic and gut microbiota functionality through proteomics. Journal of Proteomics 2016;147:28-39. [DOI: 10.1016/j.jprot.2016.03.023] [Cited by in Crossref: 27] [Cited by in F6Publishing: 26] [Article Influence: 4.5] [Reference Citation Analysis]
11 Guard BC, Suchodolski JS. HORSE SPECIES SYMPOSIUM: Canine intestinal microbiology and metagenomics: From phylogeny to function. J Anim Sci 2016;94:2247-61. [PMID: 27285902 DOI: 10.2527/jas.2015-0029] [Cited by in Crossref: 12] [Cited by in F6Publishing: 12] [Article Influence: 2.4] [Reference Citation Analysis]
12 Mabwi HA, Kim E, Song DG, Yoon HS, Pan CH, Komba EVG, Ko G, Cha KH. Synthetic gut microbiome: Advances and challenges. Comput Struct Biotechnol J 2021;19:363-71. [PMID: 33489006 DOI: 10.1016/j.csbj.2020.12.029] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
13 Shah RM, McKenzie EJ, Rosin MT, Jadhav SR, Gondalia SV, Rosendale D, Beale DJ. An Integrated Multi-Disciplinary Perspectivefor Addressing Challenges of the Human Gut Microbiome. Metabolites 2020;10:E94. [PMID: 32155792 DOI: 10.3390/metabo10030094] [Cited by in Crossref: 5] [Cited by in F6Publishing: 4] [Article Influence: 2.5] [Reference Citation Analysis]
14 Gao B, Chi L, Zhu Y, Shi X, Tu P, Li B, Yin J, Gao N, Shen W, Schnabl B. An Introduction to Next Generation Sequencing Bioinformatic Analysis in Gut Microbiome Studies. Biomolecules 2021;11:530. [PMID: 33918473 DOI: 10.3390/biom11040530] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
15 Mitra A, Chatterjee S, Gupta DK. Environmental Arsenic Exposure and Human Health Risk. In: Fares A, Singh SK, editors. Arsenic Water Resources Contamination. Cham: Springer International Publishing; 2020. pp. 103-29. [DOI: 10.1007/978-3-030-21258-2_5] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.7] [Reference Citation Analysis]
16 Schneider UV, Mikkelsen ND, Scheutz F, Friis-Møller A, Lisby G. Nonaplex PCR using Cliffhanger primers to identify diarrhoeagenic Escherichia coli from crude lysates of human faecal samples. PLoS One 2018;13:e0199766. [PMID: 29944710 DOI: 10.1371/journal.pone.0199766] [Cited by in Crossref: 1] [Article Influence: 0.3] [Reference Citation Analysis]
17 Krystel J, Shi Q, Shaw J, Gupta G, Hall D, Stover E. An in vitro protocol for rapidly assessing the effects of antimicrobial compounds on the unculturable bacterial plant pathogen, Candidatus Liberibacter asiaticus. Plant Methods 2019;15:85. [PMID: 31384290 DOI: 10.1186/s13007-019-0465-1] [Reference Citation Analysis]
18 Binvignat M, Sokol H, Mariotti-Ferrandiz E, Berenbaum F, Sellam J. Osteoarthritis and gut microbiome. Joint Bone Spine 2021;88:105203. [PMID: 33962035 DOI: 10.1016/j.jbspin.2021.105203] [Reference Citation Analysis]
19 Bisht V, Acharjee A, Gkoutos GV. NFnetFu: A novel workflow for microbiome data fusion. Comput Biol Med 2021;135:104556. [PMID: 34216888 DOI: 10.1016/j.compbiomed.2021.104556] [Reference Citation Analysis]
20 Mahalingam S, Dharumadurai D, Archunan G. Vaginal microbiome analysis of buffalo (Bubalus bubalis) during estrous cycle using high-throughput amplicon sequence of 16S rRNA gene. Symbiosis 2019;78:97-106. [DOI: 10.1007/s13199-018-00595-y] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
21 Kumari R, Palaniyandi S, Hildebrandt GC. Microbiome: An Emerging New Frontier in Graft-Versus-Host Disease. Dig Dis Sci 2019;64:669-77. [PMID: 30523482 DOI: 10.1007/s10620-018-5369-9] [Cited by in Crossref: 12] [Cited by in F6Publishing: 12] [Article Influence: 3.0] [Reference Citation Analysis]
22 Hayes S, Mahony J, Nauta A, van Sinderen D. Metagenomic Approaches to Assess Bacteriophages in Various Environmental Niches. Viruses 2017;9:E127. [PMID: 28538703 DOI: 10.3390/v9060127] [Cited by in Crossref: 63] [Cited by in F6Publishing: 51] [Article Influence: 12.6] [Reference Citation Analysis]
23 Maghembe R, Damian D, Makaranga A, Nyandoro SS, Lyantagaye SL, Kusari S, Hatti-Kaul R. Omics for Bioprospecting and Drug Discovery from Bacteria and Microalgae. Antibiotics (Basel) 2020;9:E229. [PMID: 32375367 DOI: 10.3390/antibiotics9050229] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 4.0] [Reference Citation Analysis]
24 Parhizgar N, Azadyekta M, Parhizgar P; M.A in clinical psychology, Department of Educational Science and Psychology, Islamshahr Branch, Islamic Azad University, Islamshahr, Iran, association professor group of psychology, Department of Educational Science and Psychology, Islamshahr Branch, Islamic Azad University, Islamshahr, Iran, Student Research Committee, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran. Validity and Reliability Assessments of a 16-item Food Frequency Questionnaire as a Probiotic and Prebiotic Consumption Scale in People Aged 20 to 40 Years in Tehran. Nutr Food Sci Res 2021;8:35-42. [DOI: 10.52547/nfsr.8.2.35] [Reference Citation Analysis]
25 Appunni S, Rubens M, Ramamoorthy V, Tonse R, Saxena A, McGranaghan P, Kaiser A, Kotecha R. Emerging Evidence on the Effects of Dietary Factors on the Gut Microbiome in Colorectal Cancer. Front Nutr 2021;8:718389. [PMID: 34708063 DOI: 10.3389/fnut.2021.718389] [Reference Citation Analysis]
26 Garrido-Cardenas JA, Manzano-Agugliaro F. The metagenomics worldwide research. Curr Genet 2017;63:819-29. [PMID: 28401295 DOI: 10.1007/s00294-017-0693-8] [Cited by in Crossref: 39] [Cited by in F6Publishing: 28] [Article Influence: 7.8] [Reference Citation Analysis]
27 Wang LJ, Yang CY, Chou WJ, Lee MJ, Chou MC, Kuo HC, Yeh YM, Lee SY, Huang LH, Li SC. Gut microbiota and dietary patterns in children with attention-deficit/hyperactivity disorder. Eur Child Adolesc Psychiatry 2020;29:287-97. [PMID: 31119393 DOI: 10.1007/s00787-019-01352-2] [Cited by in Crossref: 23] [Cited by in F6Publishing: 18] [Article Influence: 7.7] [Reference Citation Analysis]
28 Johns MS, Petrelli NJ. Microbiome and colorectal cancer: A review of the past, present, and future. Surg Oncol 2021;37:101560. [PMID: 33848761 DOI: 10.1016/j.suronc.2021.101560] [Reference Citation Analysis]
29 Coit P, Sawalha AH. The human microbiome in rheumatic autoimmune diseases: A comprehensive review. Clinical Immunology 2016;170:70-9. [DOI: 10.1016/j.clim.2016.07.026] [Cited by in Crossref: 18] [Cited by in F6Publishing: 20] [Article Influence: 3.0] [Reference Citation Analysis]
30 Kalaimurugan D, Balamuralikrishnan B, Govindarajan RK, Al-dhabi NA, Valan Arasu M, Vadivalagan C, Venkatesan S, Kamyab H, Chelliapan S, Khanongnuch C. Production and Characterization of a Novel Biosurfactant Molecule from Bacillus safensis YKS2 and Assessment of Its Efficiencies in Wastewater Treatment by a Directed Metagenomic Approach. Sustainability 2022;14:2142. [DOI: 10.3390/su14042142] [Reference Citation Analysis]
31 Janssens Y, Nielandt J, Bronselaer A, Debunne N, Verbeke F, Wynendaele E, Van Immerseel F, Vandewynckel YP, De Tré G, De Spiegeleer B. Disbiome database: linking the microbiome to disease. BMC Microbiol 2018;18:50. [PMID: 29866037 DOI: 10.1186/s12866-018-1197-5] [Cited by in Crossref: 55] [Cited by in F6Publishing: 45] [Article Influence: 13.8] [Reference Citation Analysis]
32 Xue B, Dai K, Zhang X, Wang S, Li C, Zhao C, Yang X, Xi Z, Qiu Z, Shen Z, Wang J. Low-concentration of dichloroacetonitrile (DCAN) in drinking water perturbs the health-associated gut microbiome and metabolic profile in rats. Chemosphere 2020;258:127067. [PMID: 32544817 DOI: 10.1016/j.chemosphere.2020.127067] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
33 Uritskiy G, DiRuggiero J. Applying Genome-Resolved Metagenomics to Deconvolute the Halophilic Microbiome. Genes (Basel) 2019;10:E220. [PMID: 30875864 DOI: 10.3390/genes10030220] [Cited by in Crossref: 11] [Cited by in F6Publishing: 8] [Article Influence: 3.7] [Reference Citation Analysis]
34 Al-Balawi M, Morsy FM. Enterococcus faecalis Is a Better Competitor Than Other Lactic Acid Bacteria in the Initial Colonization of Colon of Healthy Newborn Babies at First Week of Their Life. Front Microbiol 2020;11:2017. [PMID: 33133027 DOI: 10.3389/fmicb.2020.02017] [Cited by in Crossref: 3] [Article Influence: 1.5] [Reference Citation Analysis]
35 Verma MK, Ahmed V, Gupta S, Kumar J, Pandey R, Mandhan V, Chauhan NS. Functional metagenomics identifies novel genes ABCTPP, TMSRP1 and TLSRP1 among human gut enterotypes. Sci Rep 2018;8:1397. [PMID: 29362424 DOI: 10.1038/s41598-018-19862-5] [Cited by in Crossref: 20] [Cited by in F6Publishing: 7] [Article Influence: 5.0] [Reference Citation Analysis]
36 Kabwe MH, Vikram S, Mulaudzi K, Jansson JK, Makhalanyane TP. The gut mycobiota of rural and urban individuals is shaped by geography. BMC Microbiol 2020;20:257. [PMID: 32807105 DOI: 10.1186/s12866-020-01907-3] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 1.5] [Reference Citation Analysis]
37 White LS, Van den Bogaerde J, Kamm M. The gut microbiota: cause and cure of gut diseases. Med J Aust 2018;209:312-7. [PMID: 30257633 DOI: 10.5694/mja17.01067] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
38 Lee LH, Wong SH, Chin SF, Singh V, Ab Mutalib NS. Editorial: Human Microbiome: Symbiosis to Pathogenesis. Front Microbiol 2021;12:605783. [PMID: 33679632 DOI: 10.3389/fmicb.2021.605783] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
39 Hopson LM, Singleton SS, David JA, Basuchoudhary A, Prast-Nielsen S, Klein P, Sen S, Mazumder R. Bioinformatics and machine learning in gastrointestinal microbiome research and clinical application. Prog Mol Biol Transl Sci 2020;176:141-78. [PMID: 33814114 DOI: 10.1016/bs.pmbts.2020.08.011] [Reference Citation Analysis]
40 Zhou Y, Ren M, Zhang P, Jiang D, Yao X, Luo Y, Yang Z, Wang Y. Application of Nanopore Sequencing in the Detection of Foodborne Microorganisms. Nanomaterials 2022;12:1534. [DOI: 10.3390/nano12091534] [Reference Citation Analysis]
41 Gabashvili E, Kobakhidze S, Koulouris S, Robinson T, Kotetishvili M. Bi- and Multi-directional Gene Transfer in the Natural Populations of Polyvalent Bacteriophages, and Their Host Species Spectrum Representing Foodborne Versus Other Human and/or Animal Pathogens. Food Environ Virol 2021;13:179-202. [PMID: 33484405 DOI: 10.1007/s12560-021-09460-6] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 3.0] [Reference Citation Analysis]
42 Muñoz-Benavent M, Hartkopf F, Van Den Bossche T, Piro VC, García-Ferris C, Latorre A, Renard BY, Muth T. gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms. NAR Genom Bioinform 2020;2:lqaa058. [PMID: 33575609 DOI: 10.1093/nargab/lqaa058] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
43 El-jurdi N, de Lima M, Lazarus H, Ghannoum MA. Microbiome: Its Impact Is Being Revealed! Curr Clin Micro Rpt 2017;4:78-87. [DOI: 10.1007/s40588-017-0063-9] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.2] [Reference Citation Analysis]
44 Garrido-cardenas JA, Polo-lópez MI, Oller-alberola I. Advanced microbial analysis for wastewater quality monitoring: metagenomics trend. Appl Microbiol Biotechnol 2017;101:7445-58. [DOI: 10.1007/s00253-017-8490-3] [Cited by in Crossref: 13] [Cited by in F6Publishing: 10] [Article Influence: 2.6] [Reference Citation Analysis]
45 Khachatryan L, de Leeuw RH, Kraakman MEM, Pappas N, Te Raa M, Mei H, de Knijff P, Laros JFJ. Taxonomic classification and abundance estimation using 16S and WGS-A comparison using controlled reference samples. Forensic Sci Int Genet 2020;46:102257. [PMID: 32058299 DOI: 10.1016/j.fsigen.2020.102257] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
46 Liu Y, Li X, Yang Y, Liu Y, Wang S, Ji B, Wei Y. Exploring Gut Microbiota in Patients with Colorectal Disease Based on 16S rRNA Gene Amplicon and Shallow Metagenomic Sequencing. Front Mol Biosci 2021;8:703638. [PMID: 34307461 DOI: 10.3389/fmolb.2021.703638] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
47 Zulian A, Cancello R, Cesana E, Rizzi E, Consolandi C, Severgnini M, Panizzo V, Di Blasio AM, Micheletto G, Invitti C. Adipose tissue microbiota in humans: an open issue. Int J Obes (Lond) 2016;40:1643-8. [PMID: 27297798 DOI: 10.1038/ijo.2016.111] [Cited by in Crossref: 8] [Cited by in F6Publishing: 5] [Article Influence: 1.3] [Reference Citation Analysis]
48 Jia T, Zhao S, Knott K, Li X, Liu Y, Li Y, Chen Y, Yang M, Lu Y, Wu J, Zhang C. The gastrointestinal tract microbiota of northern white-cheeked gibbons (Nomascus leucogenys) varies with age and captive condition. Sci Rep 2018;8:3214. [PMID: 29453448 DOI: 10.1038/s41598-018-21117-2] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 1.3] [Reference Citation Analysis]
49 Szopinska JW, Gresse R, van der Marel S, Boekhorst J, Lukovac S, van Swam I, Franke B, Timmerman H, Belzer C, Arias Vasquez A. Reliability of a participant-friendly fecal collection method for microbiome analyses: a step towards large sample size investigation. BMC Microbiol 2018;18:110. [PMID: 30189859 DOI: 10.1186/s12866-018-1249-x] [Cited by in Crossref: 12] [Cited by in F6Publishing: 10] [Article Influence: 3.0] [Reference Citation Analysis]
50 Astudillo-de la Vega H, Alonso-Luna O, Ali-Pérez J, López-Camarillo C, Ruiz-Garcia E. Oncobiome at the Forefront of a Novel Molecular Mechanism to Understand the Microbiome and Cancer. Adv Exp Med Biol 2019;1168:147-56. [PMID: 31713170 DOI: 10.1007/978-3-030-24100-1_10] [Reference Citation Analysis]
51 Thumann TA, Pferschy-Wenzig EM, Moissl-Eichinger C, Bauer R. The role of gut microbiota for the activity of medicinal plants traditionally used in the European Union for gastrointestinal disorders. J Ethnopharmacol 2019;245:112153. [PMID: 31408679 DOI: 10.1016/j.jep.2019.112153] [Cited by in Crossref: 16] [Cited by in F6Publishing: 13] [Article Influence: 5.3] [Reference Citation Analysis]
52 Sánchez B, Delgado S, Blanco-Míguez A, Lourenço A, Gueimonde M, Margolles A. Probiotics, gut microbiota, and their influence on host health and disease. Mol Nutr Food Res 2017;61. [PMID: 27500859 DOI: 10.1002/mnfr.201600240] [Cited by in Crossref: 336] [Cited by in F6Publishing: 283] [Article Influence: 56.0] [Reference Citation Analysis]
53 Anyansi C, Straub TJ, Manson AL, Earl AM, Abeel T. Computational Methods for Strain-Level Microbial Detection in Colony and Metagenome Sequencing Data. Front Microbiol 2020;11:1925. [PMID: 33013732 DOI: 10.3389/fmicb.2020.01925] [Cited by in Crossref: 12] [Cited by in F6Publishing: 7] [Article Influence: 6.0] [Reference Citation Analysis]
54 Tonkovic P, Kalajdziski S, Zdravevski E, Lameski P, Corizzo R, Pires IM, Garcia NM, Loncar-Turukalo T, Trajkovik V. Literature on Applied Machine Learning in Metagenomic Classification: A Scoping Review. Biology (Basel) 2020;9:E453. [PMID: 33316921 DOI: 10.3390/biology9120453] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]
55 Shen TD, Pyrsopoulos N, Rustgi VK. Microbiota and the liver: Microbiota and the Liver. Liver Transpl 2018;24:539-50. [DOI: 10.1002/lt.25008] [Cited by in Crossref: 17] [Cited by in F6Publishing: 14] [Article Influence: 4.3] [Reference Citation Analysis]
56 Lin H, He QY, Shi L, Sleeman M, Baker MS, Nice EC. Proteomics and the microbiome: pitfalls and potential. Expert Rev Proteomics 2019;16:501-11. [PMID: 30223687 DOI: 10.1080/14789450.2018.1523724] [Cited by in Crossref: 15] [Cited by in F6Publishing: 11] [Article Influence: 3.8] [Reference Citation Analysis]
57 du Teil Espina M, Gabarrini G, Harmsen HJM, Westra J, van Winkelhoff AJ, van Dijl JM. Talk to your gut: the oral-gut microbiome axis and its immunomodulatory role in the etiology of rheumatoid arthritis. FEMS Microbiol Rev 2019;43:1-18. [PMID: 30219863 DOI: 10.1093/femsre/fuy035] [Cited by in Crossref: 33] [Cited by in F6Publishing: 25] [Article Influence: 11.0] [Reference Citation Analysis]
58 McCombe PA, Henderson RD, Lee A, Lee JD, Woodruff TM, Restuadi R, McRae A, Wray NR, Ngo S, Steyn FJ. Gut microbiota in ALS: possible role in pathogenesis? Expert Rev Neurother 2019;19:785-805. [PMID: 31122082 DOI: 10.1080/14737175.2019.1623026] [Cited by in Crossref: 18] [Cited by in F6Publishing: 17] [Article Influence: 6.0] [Reference Citation Analysis]
59 Rutanga JP, Van Puyvelde S, Heroes AS, Muvunyi CM, Jacobs J, Deborggraeve S. 16S metagenomics for diagnosis of bloodstream infections: opportunities and pitfalls. Expert Rev Mol Diagn 2018;18:749-59. [PMID: 29985081 DOI: 10.1080/14737159.2018.1498786] [Cited by in Crossref: 17] [Cited by in F6Publishing: 13] [Article Influence: 4.3] [Reference Citation Analysis]
60 Abdelfattah A, Cacciola SO, Mosca S, Zappia R, Schena L. Analysis of the Fungal Diversity in Citrus Leaves with Greasy Spot Disease Symptoms. Microb Ecol 2017;73:739-49. [PMID: 27752718 DOI: 10.1007/s00248-016-0874-x] [Cited by in Crossref: 14] [Cited by in F6Publishing: 11] [Article Influence: 2.3] [Reference Citation Analysis]
61 Raman M, Ambalam P, Doble M. Probiotics and Colorectal Cancer. Probiotics and Bioactive Carbohydrates in Colon Cancer Management. New Delhi: Springer India; 2016. pp. 15-34. [DOI: 10.1007/978-81-322-2586-7_2] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
62 Pédron T, Nigro G, Sansonetti PJ. From homeostasis to pathology: decrypting microbe-host symbiotic signals in the intestinal crypt. Philos Trans R Soc Lond B Biol Sci 2016;371:20150500. [PMID: 27672151 DOI: 10.1098/rstb.2015.0500] [Cited by in Crossref: 11] [Cited by in F6Publishing: 9] [Article Influence: 2.2] [Reference Citation Analysis]
63 Kreft JU, Plugge CM, Prats C, Leveau JHJ, Zhang W, Hellweger FL. From Genes to Ecosystems in Microbiology: Modeling Approaches and the Importance of Individuality. Front Microbiol 2017;8:2299. [PMID: 29230200 DOI: 10.3389/fmicb.2017.02299] [Cited by in Crossref: 21] [Cited by in F6Publishing: 17] [Article Influence: 4.2] [Reference Citation Analysis]
64 Fu BC, Randolph TW, Lim U, Monroe KR, Cheng I, Wilkens LR, Le Marchand L, Hullar MA, Lampe JW. Characterization of the gut microbiome in epidemiologic studies: the multiethnic cohort experience. Ann Epidemiol 2016;26:373-9. [PMID: 27039047 DOI: 10.1016/j.annepidem.2016.02.009] [Cited by in Crossref: 29] [Cited by in F6Publishing: 27] [Article Influence: 4.8] [Reference Citation Analysis]
65 Harper A, Naghibi MM, Garcha D. The Role of Bacteria, Probiotics and Diet in Irritable Bowel Syndrome. Foods 2018;7:E13. [PMID: 29373532 DOI: 10.3390/foods7020013] [Cited by in Crossref: 38] [Cited by in F6Publishing: 24] [Article Influence: 9.5] [Reference Citation Analysis]
66 Zhuang S, Tan Y, Hong H, Li D, Zhang L, Luo Y. Exploration of the roles of spoilage bacteria in degrading grass carp proteins during chilled storage: A combined metagenomic and metabolomic approach. Food Research International 2022;152:110926. [DOI: 10.1016/j.foodres.2021.110926] [Reference Citation Analysis]
67 White AK, Smith RJ, Bigler CR, Brooke WF, Schauer PR. Head and neck manifestations of neurofibromatosis. Laryngoscope. 1986;96:732-737. [PMID: 3088347 DOI: 10.1249/jes.0000000000000183] [Cited by in Crossref: 106] [Cited by in F6Publishing: 65] [Article Influence: 2.9] [Reference Citation Analysis]
68 Al-Shehri SS, Sweeney EL, Cowley DM, Liley HG, Ranasinghe PD, Charles BG, Shaw PN, Vagenas D, Duley JA, Knox CL. Deep sequencing of the 16S ribosomal RNA of the neonatal oral microbiome: a comparison of breast-fed and formula-fed infants. Sci Rep 2016;6:38309. [PMID: 27922070 DOI: 10.1038/srep38309] [Cited by in Crossref: 30] [Cited by in F6Publishing: 28] [Article Influence: 5.0] [Reference Citation Analysis]
69 Sood U, Gupta V, Kumar R, Lal S, Fawcett D, Rattan S, Poinern GEJ, Lal R. Chicken Gut Microbiome and Human Health: Past Scenarios, Current Perspectives, and Futuristic Applications. Indian J Microbiol 2020;60:2-11. [PMID: 32089569 DOI: 10.1007/s12088-019-00785-2] [Cited by in Crossref: 18] [Cited by in F6Publishing: 13] [Article Influence: 6.0] [Reference Citation Analysis]
70 Nishi Y, Hatano S, Aihara K, Kihara M. [Significance of copper analysis in clinical tests]. Nihon Rinsho. 1989;48 Suppl:771-774. [PMID: 2622002 DOI: 10.1002/mnfr.201500243] [Cited by in Crossref: 16] [Cited by in F6Publishing: 13] [Article Influence: 0.5] [Reference Citation Analysis]
71 Rotz SJ, Dandoy CE. The microbiome in pediatric oncology. Cancer 2020;126:3629-37. [PMID: 32533793 DOI: 10.1002/cncr.33030] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
72 Chizhayeva A, Oleinikova Y, Saubenova M, Sadanov A, Amangeldi A, Aitzhanova A, Alybaeva A, Yelubaeva M; Laboratory of Food Microbiology, Research and Production Center for Microbiology and Virology, Almaty, Republic of Kazakhstan. . AIMS Agriculture and Food 2020;5:521-42. [DOI: 10.3934/agrfood.2020.3.521] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 1.5] [Reference Citation Analysis]
73 Uritskiy GV, DiRuggiero J, Taylor J. MetaWRAP-a flexible pipeline for genome-resolved metagenomic data analysis. Microbiome 2018;6:158. [PMID: 30219103 DOI: 10.1186/s40168-018-0541-1] [Cited by in Crossref: 256] [Cited by in F6Publishing: 194] [Article Influence: 64.0] [Reference Citation Analysis]
74 Moskovicz V, Gross A, Mizrahi B. Extrinsic Factors Shaping the Skin Microbiome. Microorganisms 2020;8:E1023. [PMID: 32664353 DOI: 10.3390/microorganisms8071023] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
75 Sharma A, Lal R. Survey of (Meta)genomic Approaches for Understanding Microbial Community Dynamics. Indian J Microbiol 2017;57:23-38. [PMID: 28148977 DOI: 10.1007/s12088-016-0629-x] [Cited by in Crossref: 17] [Cited by in F6Publishing: 6] [Article Influence: 2.8] [Reference Citation Analysis]
76 Qi J, Cai D, Cui Y, Tan T, Zou H, Guo W, Xie Y, Guo H, Chen SY, Ma X, Gou L, Cui H, Geng Y, Zhang M, Ye G, Zhong Z, Ren Z, Hu Y, Wang Y, Deng J, Yu S, Cao S, Wanapat M, Fang J, Wang Z, Zuo Z. Metagenomics Reveals That Intravenous Injection of Beta-Hydroxybutyric Acid (BHBA) Disturbs the Nasopharynx Microflora and Increases the Risk of Respiratory Diseases. Front Microbiol 2020;11:630280. [PMID: 33613471 DOI: 10.3389/fmicb.2020.630280] [Cited by in F6Publishing: 3] [Reference Citation Analysis]
77 Martínez JE, Vargas A, Pérez-Sánchez T, Encío IJ, Cabello-Olmo M, Barajas M. Human Microbiota Network: Unveiling Potential Crosstalk between the Different Microbiota Ecosystems and Their Role in Health and Disease. Nutrients 2021;13:2905. [PMID: 34578783 DOI: 10.3390/nu13092905] [Reference Citation Analysis]
78 Lamichhane S, Sen P, Dickens AM, Orešič M, Bertram HC. Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe. Methods 2018;149:3-12. [PMID: 29715508 DOI: 10.1016/j.ymeth.2018.04.029] [Cited by in Crossref: 54] [Cited by in F6Publishing: 46] [Article Influence: 13.5] [Reference Citation Analysis]
79 Quigley EMM. Microbiota-Brain-Gut Axis and Neurodegenerative Diseases. Curr Neurol Neurosci Rep 2017;17:94. [PMID: 29039142 DOI: 10.1007/s11910-017-0802-6] [Cited by in Crossref: 205] [Cited by in F6Publishing: 185] [Article Influence: 41.0] [Reference Citation Analysis]
80 Crouser ED, Fingerlin TE, Yang IV, Maier LA, Nana-Sinkam P, Collman RG, Kaminski N. Application of "Omics" and Systems Biology to Sarcoidosis Research. Ann Am Thorac Soc 2017;14:S445-51. [PMID: 29053026 DOI: 10.1513/AnnalsATS.201707-567OT] [Cited by in Crossref: 18] [Cited by in F6Publishing: 7] [Article Influence: 4.5] [Reference Citation Analysis]
81 Wang W, Xu S, Ren Z, Jiang J, Zheng S. Gut microbiota and allogeneic transplantation. J Transl Med 2015;13. [DOI: 10.1186/s12967-015-0640-8] [Reference Citation Analysis]
82 Seesao Y, Gay M, Merlin S, Viscogliosi E, Aliouat-Denis CM, Audebert C. A review of methods for nematode identification. J Microbiol Methods 2017;138:37-49. [PMID: 27262374 DOI: 10.1016/j.mimet.2016.05.030] [Cited by in Crossref: 27] [Cited by in F6Publishing: 17] [Article Influence: 4.5] [Reference Citation Analysis]
83 Kumar P, Sinha R, Shukla P. Artificial intelligence and synthetic biology approaches for human gut microbiome. Crit Rev Food Sci Nutr 2020;:1-19. [PMID: 33249867 DOI: 10.1080/10408398.2020.1850415] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
84 Ryan J, Jones S, Hayes P, Craig J. Leadership Evolution for Planetary Health: A Genomics Perspective. Challenges 2019;10:4. [DOI: 10.3390/challe10010004] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.7] [Reference Citation Analysis]
85 Santiago-Rodriguez TM, Cano R, Jiménez-Flores R. Potential applications of metagenomics to assess the biological effects of food structure and function. Food Funct 2016;7:4160-9. [PMID: 27386789 DOI: 10.1039/c6fo00317f] [Cited by in Crossref: 6] [Cited by in F6Publishing: 1] [Article Influence: 1.5] [Reference Citation Analysis]
86 Sitkin SI, Vakhitov TY, Demyanova EV. Microbiome, gut dysbiosis and inflammatory bowel disease: That moment when the function is more important than taxonomy. Alʹm klin med 2018;46:396-425. [DOI: 10.18786/2072-0505-2018-46-5-396-425] [Cited by in Crossref: 12] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
87 Shang J, Sun Y. CHEER: HierarCHical taxonomic classification for viral mEtagEnomic data via deep leaRning. Methods 2021;189:95-103. [PMID: 32454212 DOI: 10.1016/j.ymeth.2020.05.018] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]
88 Tian X, Yang Z, Luo F, Zheng S. Gut microbial balance and liver transplantation: alteration, management, and prediction. Front Med 2018;12:123-9. [PMID: 29230676 DOI: 10.1007/s11684-017-0563-2] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 0.8] [Reference Citation Analysis]
89 Ezzeldin S, El-Wazir A, Enany S, Muhammad A, Johar D, Osama A, Ahmed E, Shikshaky H, Magdeldin S. Current Understanding of Human Metaproteome Association and Modulation. J Proteome Res 2019;18:3539-54. [PMID: 31262181 DOI: 10.1021/acs.jproteome.9b00301] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
90 Gavriilaki M, Sakellari I, Anagnostopoulos A, Gavriilaki E. The Impact of Antibiotic-Mediated Modification of the Intestinal Microbiome on Outcomes of Allogeneic Hematopoietic Cell Transplantation: Systematic Review and Meta-Analysis. Biol Blood Marrow Transplant 2020;26:1738-46. [PMID: 32447043 DOI: 10.1016/j.bbmt.2020.05.011] [Cited by in Crossref: 9] [Cited by in F6Publishing: 10] [Article Influence: 4.5] [Reference Citation Analysis]
91 Rianda D, Agustina R, Setiawan E, Manikam N. Effect of probiotic supplementation on cognitive function in children and adolescents: a systematic review of randomised trials. Beneficial Microbes 2019;10:873-82. [DOI: 10.3920/bm2019.0068] [Cited by in Crossref: 14] [Cited by in F6Publishing: 5] [Article Influence: 4.7] [Reference Citation Analysis]
92 Rowland I, Gibson G, Heinken A, Scott K, Swann J, Thiele I, Tuohy K. Gut microbiota functions: metabolism of nutrients and other food components. Eur J Nutr. 2018;57:1-24. [PMID: 28393285 DOI: 10.1007/s00394-017-1445-8] [Cited by in Crossref: 638] [Cited by in F6Publishing: 552] [Article Influence: 127.6] [Reference Citation Analysis]
93 Shahi F, Redeker K, Chong J. Rethinking antimicrobial stewardship paradigms in the context of the gut microbiome. JAC Antimicrob Resist 2019;1:dlz015. [PMID: 34222889 DOI: 10.1093/jacamr/dlz015] [Cited by in Crossref: 3] [Article Influence: 1.0] [Reference Citation Analysis]
94 Foppa C, Ng SC, Montorsi M, Spinelli A. Anastomotic leak in colorectal cancer patients: New insights and perspectives. Eur J Surg Oncol 2020;46:943-54. [PMID: 32139117 DOI: 10.1016/j.ejso.2020.02.027] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 3.5] [Reference Citation Analysis]
95 Adnani N, Rajski SR, Bugni TS. Symbiosis-inspired approaches to antibiotic discovery. Nat Prod Rep 2017;34:784-814. [PMID: 28561849 DOI: 10.1039/c7np00009j] [Cited by in Crossref: 61] [Cited by in F6Publishing: 25] [Article Influence: 12.2] [Reference Citation Analysis]
96 Ando K, Hu Q, Kasagi Y, Oki E, Mori M. Recent developments in cancer research: Expectations for a new remedy. Ann Gastroenterol Surg 2021;5:419-26. [PMID: 34337290 DOI: 10.1002/ags3.12440] [Reference Citation Analysis]
97 Minichino A, Jackson MA, Francesconi M, Steves CJ, Menni C, Burnet PWJ, Lennox BR. Endocannabinoid system mediates the association between gut-microbial diversity and anhedonia/amotivation in a general population cohort. Mol Psychiatry 2021. [PMID: 34002020 DOI: 10.1038/s41380-021-01147-5] [Reference Citation Analysis]
98 Liu NN, Ma Q, Ge Y, Yi CX, Wei LQ, Tan JC, Chu Q, Li JQ, Zhang P, Wang H. Microbiome dysbiosis in lung cancer: from composition to therapy. NPJ Precis Oncol 2020;4:33. [PMID: 33303906 DOI: 10.1038/s41698-020-00138-z] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 3.0] [Reference Citation Analysis]
99 Whelan FJ, Waddell B, Syed SA, Shekarriz S, Rabin HR, Parkins MD, Surette MG. Culture-enriched metagenomic sequencing enables in-depth profiling of the cystic fibrosis lung microbiota. Nat Microbiol 2020;5:379-90. [PMID: 31959969 DOI: 10.1038/s41564-019-0643-y] [Cited by in Crossref: 21] [Cited by in F6Publishing: 18] [Article Influence: 10.5] [Reference Citation Analysis]
100 López-Leal G, Cornejo-Granados F, Hurtado-Ramírez JM, Mendoza-Vargas A, Ochoa-Leyva A. Functional and taxonomic classification of a greenhouse water drain metagenome. Stand Genomic Sci 2018;13:20. [PMID: 30323887 DOI: 10.1186/s40793-018-0326-y] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
101 Calo-mata P, Ageitos JM, Böhme K, Barros-velázquez J. Intestinal Microbiota: First Barrier Against Gut-Affecting Pathogens. In: Villa TG, Vinas M, editors. New Weapons to Control Bacterial Growth. Cham: Springer International Publishing; 2016. pp. 281-314. [DOI: 10.1007/978-3-319-28368-5_12] [Cited by in Crossref: 5] [Cited by in F6Publishing: 2] [Article Influence: 0.8] [Reference Citation Analysis]
102 Catho G, Huttner BD. Strategies for the eradication of extended-spectrum beta-lactamase or carbapenemase-producing Enterobacteriaceae intestinal carriage. Expert Rev Anti Infect Ther 2019;17:557-69. [PMID: 31313610 DOI: 10.1080/14787210.2019.1645007] [Cited by in Crossref: 10] [Cited by in F6Publishing: 7] [Article Influence: 3.3] [Reference Citation Analysis]
103 Bilen M. Strategies and advancements in human microbiome description and the importance of culturomics. Microb Pathog 2020;149:104460. [PMID: 32853680 DOI: 10.1016/j.micpath.2020.104460] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
104 Hong T, Wang R, Wang X, Yang S, Wang W, Gao Q, Zhang X. Interplay Between the Intestinal Microbiota and Acute Graft-Versus-Host Disease: Experimental Evidence and Clinical Significance. Front Immunol 2021;12:644982. [PMID: 33815399 DOI: 10.3389/fimmu.2021.644982] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
105 Chen F, Wen Q, Jiang J, Li HL, Tan YF, Li YH, Zeng NK. Could the gut microbiota reconcile the oral bioavailability conundrum of traditional herbs? J Ethnopharmacol 2016;179:253-64. [PMID: 26723469 DOI: 10.1016/j.jep.2015.12.031] [Cited by in Crossref: 74] [Cited by in F6Publishing: 70] [Article Influence: 10.6] [Reference Citation Analysis]
106 Lee PY, Chin SF, Neoh HM, Jamal R. Metaproteomic analysis of human gut microbiota: where are we heading? J Biomed Sci 2017;24:36. [PMID: 28606141 DOI: 10.1186/s12929-017-0342-z] [Cited by in Crossref: 30] [Cited by in F6Publishing: 20] [Article Influence: 6.0] [Reference Citation Analysis]
107 Quigley EM. Basic Definitions and Concepts: Organization of the Gut Microbiome. Gastroenterol Clin North Am 2017;46:1-8. [PMID: 28164844 DOI: 10.1016/j.gtc.2016.09.002] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 2.0] [Reference Citation Analysis]
108 Alves G, Wang G, Ogurtsov AY, Drake SK, Gucek M, Sacks DB, Yu YK. Rapid Classification and Identification of Multiple Microorganisms with Accurate Statistical Significance via High-Resolution Tandem Mass Spectrometry. J Am Soc Mass Spectrom 2018;29:1721-37. [PMID: 29873019 DOI: 10.1007/s13361-018-1986-y] [Cited by in Crossref: 15] [Cited by in F6Publishing: 10] [Article Influence: 3.8] [Reference Citation Analysis]
109 Wang W, Xu S, Ren Z, Jiang J, Zheng S. Gut microbiota and allogeneic transplantation. J Transl Med. 2015;13:275. [PMID: 26298517 DOI: 10.1186/s12967-015-0640-8] [Cited by in Crossref: 44] [Cited by in F6Publishing: 43] [Article Influence: 6.3] [Reference Citation Analysis]
110 Pinto E, Anselmo M, Calha M, Bottrill A, Duarte I, Andrew PW, Faleiro ML. The intestinal proteome of diabetic and control children is enriched with different microbial and host proteins. Microbiology (Reading) 2017;163:161-74. [PMID: 28270263 DOI: 10.1099/mic.0.000412] [Cited by in Crossref: 26] [Cited by in F6Publishing: 26] [Article Influence: 5.2] [Reference Citation Analysis]
111 von Bronk B, Götz A, Opitz M. Complex microbial systems across different levels of description. Phys Biol 2018;15:051002. [PMID: 29757151 DOI: 10.1088/1478-3975/aac473] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
112 Blanco-Míguez A, Fdez-Riverola F, Sánchez B, Lourenço A. Resources and tools for the high-throughput, multi-omic study of intestinal microbiota. Brief Bioinform 2019;20:1032-56. [PMID: 29186315 DOI: 10.1093/bib/bbx156] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 4.0] [Reference Citation Analysis]
113 Di Carlo P, Serra N, D'Arpa F, Agrusa A, Gulotta G, Fasciana T, Rodolico V, Giammanco A, Sergi C. The microbiota of the bilio-pancreatic system: a cohort, STROBE-compliant study. Infect Drug Resist 2019;12:1513-27. [PMID: 31354308 DOI: 10.2147/IDR.S200378] [Cited by in Crossref: 8] [Cited by in F6Publishing: 5] [Article Influence: 2.7] [Reference Citation Analysis]
114 Zhou K, Xiao NQ, Tan ZJ. Intestinal microecological mechanism for Baohe Pill to treat food-stagnation-type gastrointestinal diarrhea. Shijie Huaren Xiaohua Zazhi 2022; 30(5): 217-222 [DOI: 10.11569/wcjd.v30.i5.217] [Reference Citation Analysis]
115 Mohd-yusof NS, Abdul-latiff MAB, Mohd-ridwan AR, Badrulisham AS, Othman N, Yaakop S, Md-nor S, Md-zain BM. First report on metabarcoding analysis of gut microbiome in Island Flying Fox (Pteropus hypomelanus) in island populations of Malaysia. BDJ 2022;10:e69631. [DOI: 10.3897/bdj.10.e69631] [Reference Citation Analysis]
116 Wu SC, Rau CS, Liu HT, Kuo PJ, Chien PC, Hsieh TM, Tsai CH, Chuang JF, Huang CY, Hsieh HY, Hsieh CH. Metagenome Analysis as a Tool to Study Bacterial Infection Associated with Acute Surgical Abdomen. J Clin Med 2018;7:E346. [PMID: 30322074 DOI: 10.3390/jcm7100346] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
117 Haange SB, Jehmlich N. Proteomic interrogation of the gut microbiota: potential clinical impact. Expert Rev Proteomics 2016;13:535-7. [PMID: 27187145 DOI: 10.1080/14789450.2016.1190652] [Cited by in Crossref: 11] [Cited by in F6Publishing: 10] [Article Influence: 1.8] [Reference Citation Analysis]
118 Wang Y, Xu J, Kong L, Li B, Li H, Huang WE, Zheng C. Raman-activated sorting of antibiotic-resistant bacteria in human gut microbiota. Environ Microbiol 2020;22:2613-24. [PMID: 32114713 DOI: 10.1111/1462-2920.14962] [Cited by in Crossref: 10] [Cited by in F6Publishing: 7] [Article Influence: 5.0] [Reference Citation Analysis]
119 Willmann M, Peter S. Translational metagenomics and the human resistome: confronting the menace of the new millennium. J Mol Med (Berl) 2017;95:41-51. [PMID: 27766372 DOI: 10.1007/s00109-016-1478-0] [Cited by in Crossref: 16] [Cited by in F6Publishing: 14] [Article Influence: 2.7] [Reference Citation Analysis]
120 Amitay EL, Krilaviciute A, Brenner H. Systematic review: Gut microbiota in fecal samples and detection of colorectal neoplasms. Gut Microbes. 2018;9:293-307. [PMID: 29543545 DOI: 10.1080/19490976.2018.1445957] [Cited by in Crossref: 11] [Cited by in F6Publishing: 14] [Article Influence: 2.8] [Reference Citation Analysis]
121 Cui Y, Qi J, Cai D, Fang J, Xie Y, Guo H, Chen S, Ma X, Gou L, Cui H, Geng Y, Ye G, Zhong Z, Ren Z, Hu Y, Wang Y, Deng J, Yu S, Cao S, Zou H, Wang Z, Zuo Z. Metagenomics Reveals That Proper Placement After Long-Distance Transportation Significantly Affects Calf Nasopharyngeal Microbiota and Is Critical for the Prevention of Respiratory Diseases. Front Microbiol 2021;12:700704. [PMID: 34616374 DOI: 10.3389/fmicb.2021.700704] [Reference Citation Analysis]
122 Takihara H, Miura N, Aoki-Kinoshita KF, Okuda S. Functional glyco-metagenomics elucidates the role of glycan-related genes in environments. BMC Bioinformatics 2021;22:505. [PMID: 34663219 DOI: 10.1186/s12859-021-04425-9] [Reference Citation Analysis]
123 Yu S, Xiong Y, Fu Y, Chen G, Zhu H, Mo X, Wu D, Xu J. Shotgun metagenomics reveals significant gut microbiome features in different grades of acute pancreatitis. Microb Pathog. 2021;154:104849. [PMID: 33781869 DOI: 10.1016/j.micpath.2021.104849] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
124 Khare M, Sinha D, Zgheib R, Traore SI, Lagier JC, Raoult D, Edouard FP. Genomic description and characterization of Nigeribacterium massiliense gen. nov., sp. nov., isolated from the human gut. Microbes Infect 2021;:104842. [PMID: 34020025 DOI: 10.1016/j.micinf.2021.104842] [Reference Citation Analysis]
125 Harikrishnan S. Diet, the Gut Microbiome and Heart Failure. Card Fail Rev 2019;5:119-22. [PMID: 31179023 DOI: 10.15420/cfr.2018.39.2] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
126 Salagre E, Vieta E, Grande I. El cerebro visceral: trastorno bipolar y microbiota. Revista de Psiquiatría y Salud Mental 2017;10:67-9. [DOI: 10.1016/j.rpsm.2017.02.001] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 2.0] [Reference Citation Analysis]
127 Fehily SR, Basnayake C, Wright EK, Kamm MA. The gut microbiota and gut disease. Intern Med J 2021;51:1594-604. [PMID: 34664371 DOI: 10.1111/imj.15520] [Reference Citation Analysis]
128 Youngblut ND, de la Cuesta-Zuluaga J, Reischer GH, Dauser S, Schuster N, Walzer C, Stalder G, Farnleitner AH, Ley RE. Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity. mSystems 2020;5:e01045-20. [PMID: 33144315 DOI: 10.1128/mSystems.01045-20] [Cited by in Crossref: 7] [Cited by in F6Publishing: 9] [Article Influence: 3.5] [Reference Citation Analysis]
129 Westreich ST, Salcedo J, Durbin-Johnson B, Smilowitz JT, Korf I, Mills DA, Barile D, Lemay DG. Fecal metatranscriptomics and glycomics suggest that bovine milk oligosaccharides are fully utilized by healthy adults. J Nutr Biochem 2020;79:108340. [PMID: 32028108 DOI: 10.1016/j.jnutbio.2020.108340] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
130 Olaniyi OO, Li H, Zhu Y, Cui L. Metabolic responses of indigenous bacteria in chicken faeces and maggots to multiple antibiotics via heavy water labeled single-cell Raman spectroscopy. J Environ Sci (China) 2022;113:394-402. [PMID: 34963547 DOI: 10.1016/j.jes.2021.06.024] [Reference Citation Analysis]
131 Zheng Y, Ran Y, Zhang H, Wang B, Zhou L. The Microbiome in Autoimmune Liver Diseases: Metagenomic and Metabolomic Changes. Front Physiol 2021;12:715852. [PMID: 34690796 DOI: 10.3389/fphys.2021.715852] [Reference Citation Analysis]
132 Feng XW, Ding WP, Xiong LY, Guo L, Sun JM, Xiao P. Recent Advancements in Intestinal Microbiota Analyses: A Review for Non-Microbiologists. Curr Med Sci. 2018;38:949-961. [PMID: 30536055 DOI: 10.1007/s11596-018-1969-z] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 0.8] [Reference Citation Analysis]
133 Nesengani LT, Wang J, Yang Y, Yang L, Lu W. Unravelling vaginal microbial genetic diversity and abundance between Holstein and Fleckvieh cattle. RSC Adv 2017;7:56137-43. [DOI: 10.1039/c7ra10553c] [Cited by in Crossref: 4] [Article Influence: 0.8] [Reference Citation Analysis]
134 Messer JS, Chang EB. Microbial Physiology of the Digestive Tract and Its Role in Inflammatory Bowel Diseases. Physiology of the Gastrointestinal Tract. Elsevier; 2018. pp. 795-810. [DOI: 10.1016/b978-0-12-809954-4.00036-0] [Cited by in Crossref: 4] [Article Influence: 1.0] [Reference Citation Analysis]
135 Ni Y, Yu G, Chen H, Deng Y, Wells PM, Steves CJ, Ju F, Fu J. M2IA: a web server for microbiome and metabolome integrative analysis. Bioinformatics 2020;36:3493-8. [PMID: 32176258 DOI: 10.1093/bioinformatics/btaa188] [Cited by in Crossref: 12] [Cited by in F6Publishing: 9] [Article Influence: 6.0] [Reference Citation Analysis]
136 Schulberg J, De Cruz P. Characterisation and therapeutic manipulation of the gut microbiome in inflammatory bowel disease: The gut microbiome in IBD. Intern Med J 2016;46:266-73. [DOI: 10.1111/imj.13003] [Cited by in Crossref: 16] [Cited by in F6Publishing: 14] [Article Influence: 2.7] [Reference Citation Analysis]
137 Cortés A, Peachey LE, Jenkins TP, Scotti R, Cantacessi C. Helminths and microbes within the vertebrate gut - not all studies are created equal. Parasitology 2019;146:1371-8. [PMID: 31258097 DOI: 10.1017/S003118201900088X] [Cited by in Crossref: 11] [Cited by in F6Publishing: 12] [Article Influence: 3.7] [Reference Citation Analysis]
138 Glasl B, Webster NS, Bourne DG. Microbial indicators as a diagnostic tool for assessing water quality and climate stress in coral reef ecosystems. Mar Biol 2017;164. [DOI: 10.1007/s00227-017-3097-x] [Cited by in Crossref: 57] [Cited by in F6Publishing: 16] [Article Influence: 11.4] [Reference Citation Analysis]
139 Kharrat N, Assidi M, Abu-Elmagd M, Pushparaj PN, Alkhaldy A, Arfaoui L, Naseer MI, El Omri A, Messaoudi S, Buhmeida A, Rebai A. Data mining analysis of human gut microbiota links Fusobacterium spp. with colorectal cancer onset. Bioinformation 2019;15:372-9. [PMID: 31312073 DOI: 10.6026/97320630015372] [Cited by in Crossref: 5] [Cited by in F6Publishing: 8] [Article Influence: 1.7] [Reference Citation Analysis]
140 Pei Y, Yu Z, Ji J, Khan A, Li X. Microbial Community Structure and Function Indicate the Severity of Chromium Contamination of the Yellow River. Front Microbiol 2018;9:38. [PMID: 29472897 DOI: 10.3389/fmicb.2018.00038] [Cited by in Crossref: 35] [Cited by in F6Publishing: 29] [Article Influence: 8.8] [Reference Citation Analysis]
141 Takahashi M, Kita Y, Mizuno A, Goto-Yamamoto N. Evaluation of method bias for determining bacterial populations in bacterial community analyses. J Biosci Bioeng 2017;124:476-86. [PMID: 28601609 DOI: 10.1016/j.jbiosc.2017.05.007] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
142 Jazayeri O, Daghighi SM, Rezaee F. Lifestyle alters GUT-bacteria function: Linking immune response and host. Best Practice & Research Clinical Gastroenterology 2017;31:625-35. [DOI: 10.1016/j.bpg.2017.09.009] [Cited by in Crossref: 7] [Cited by in F6Publishing: 8] [Article Influence: 1.4] [Reference Citation Analysis]
143 Plaza Oñate F, Le Chatelier E, Almeida M, Cervino ACL, Gauthier F, Magoulès F, Ehrlich SD, Pichaud M. MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data. Bioinformatics 2019;35:1544-52. [PMID: 30252023 DOI: 10.1093/bioinformatics/bty830] [Cited by in Crossref: 36] [Cited by in F6Publishing: 27] [Article Influence: 18.0] [Reference Citation Analysis]
144 Liu H, Liu H, Liu C, Shang M, Wei T, Yin P. Gut Microbiome and the Role of Metabolites in the Study of Graves’ Disease. Front Mol Biosci 2022;9:841223. [DOI: 10.3389/fmolb.2022.841223] [Reference Citation Analysis]
145 Larsen PE, Dai Y. Metabolome of human gut microbiome is predictive of host dysbiosis. Gigascience 2015;4:42. [PMID: 26380076 DOI: 10.1186/s13742-015-0084-3] [Cited by in Crossref: 65] [Cited by in F6Publishing: 54] [Article Influence: 9.3] [Reference Citation Analysis]