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For: Theys K, Libin P, Dallmeier K, Pineda-Peña AC, Vandamme AM, Cuypers L, Abecasis AB. Zika genomics urgently need standardized and curated reference sequences. PLoS Pathog 2017;13:e1006528. [PMID: 28880955 DOI: 10.1371/journal.ppat.1006528] [Cited by in Crossref: 8] [Cited by in F6Publishing: 10] [Article Influence: 1.3] [Reference Citation Analysis]
Number Citing Articles
1 Cheng ML, Yang YX, Liu ZY, Wen D, Yang P, Huang XY, Dong HL, Xu YP, Li XF, Deng YQ, Ye Q, Zhu L, Li J, Davidson AD, Zheng AH, Shi WF, Zhao H, Wang XX, Qin CF. Pathogenicity and Structural Basis of Zika Variants with Glycan Loop Deletions in the Envelope Protein. J Virol 2022;96:e0087922. [PMID: 36377874 DOI: 10.1128/jvi.00879-22] [Reference Citation Analysis]
2 Hufsky F, Lamkiewicz K, Almeida A, Aouacheria A, Arighi C, Bateman A, Baumbach J, Beerenwinkel N, Brandt C, Cacciabue M, Chuguransky S, Drechsel O, Finn RD, Fritz A, Fuchs S, Hattab G, Hauschild AC, Heider D, Hoffmann M, Hölzer M, Hoops S, Kaderali L, Kalvari I, von Kleist M, Kmiecinski R, Kühnert D, Lasso G, Libin P, List M, Löchel HF, Martin MJ, Martin R, Matschinske J, McHardy AC, Mendes P, Mistry J, Navratil V, Nawrocki EP, O'Toole ÁN, Ontiveros-Palacios N, Petrov AI, Rangel-Pineros G, Redaschi N, Reimering S, Reinert K, Reyes A, Richardson L, Robertson DL, Sadegh S, Singer JB, Theys K, Upton C, Welzel M, Williams L, Marz M. Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research. Brief Bioinform 2021;22:642-63. [PMID: 33147627 DOI: 10.1093/bib/bbaa232] [Cited by in Crossref: 77] [Cited by in F6Publishing: 81] [Article Influence: 25.7] [Reference Citation Analysis]
3 Libin PJK, Deforche K, Abecasis AB, Theys K. VIRULIGN: fast codon-correct alignment and annotation of viral genomes. Bioinformatics 2019;35:1763-5. [PMID: 30295730 DOI: 10.1093/bioinformatics/bty851] [Cited by in Crossref: 32] [Cited by in F6Publishing: 36] [Article Influence: 10.7] [Reference Citation Analysis]
4 Larsen CN, Sun G, Li X, Zaremba S, Zhao H, He S, Zhou L, Kumar S, Desborough V, Klem EB. Mat_peptide: comprehensive annotation of mature peptides from polyproteins in five virus families. Bioinformatics 2020;36:1627-8. [PMID: 31609421 DOI: 10.1093/bioinformatics/btz777] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
5 Kamelian K, Montoya V, Olmstead A, Dong W, Harrigan R, Morshed M, Joy JB. Phylogenetic surveillance of travel-related Zika virus infections through whole-genome sequencing methods. Sci Rep 2019;9:16433. [PMID: 31712570 DOI: 10.1038/s41598-019-52613-8] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]
6 Nebenzahl-guimaraes H, Libin P, Pimentel V, Pingarilho M, Theys K, Abecasis AB. An updated genotype classification system for Zika viruses.. [DOI: 10.1101/760066] [Reference Citation Analysis]
7 Fonseca V, Libin PJK, Theys K, Faria NR, Nunes MRT, Restovic MI, Freire M, Giovanetti M, Cuypers L, Nowé A, Abecasis A, Deforche K, Santiago GA, Siqueira IC, San EJ, Machado KCB, Azevedo V, Filippis AMB, Cunha RVD, Pybus OG, Vandamme AM, Alcantara LCJ, de Oliveira T. A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes. PLoS Negl Trop Dis 2019;13:e0007231. [PMID: 31067235 DOI: 10.1371/journal.pntd.0007231] [Cited by in Crossref: 28] [Cited by in F6Publishing: 29] [Article Influence: 7.0] [Reference Citation Analysis]
8 Kum DB, Mishra N, Boudewijns R, Gladwyn-Ng I, Alfano C, Ma J, Schmid MA, Marques RE, Schols D, Kaptein S, Nguyen L, Neyts J, Dallmeier K. A yellow fever-Zika chimeric virus vaccine candidate protects against Zika infection and congenital malformations in mice. NPJ Vaccines 2018;3:56. [PMID: 30564463 DOI: 10.1038/s41541-018-0092-2] [Cited by in Crossref: 30] [Cited by in F6Publishing: 26] [Article Influence: 6.0] [Reference Citation Analysis]
9 Libin P, Deforche K, Abecasis AB, Theys K. VIRULIGN: fast codon-correct alignment and annotation of viral genomes.. [DOI: 10.1101/409052] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 0.6] [Reference Citation Analysis]