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For: Sarmady M, Dampier W, Tozeren A. Sequence- and interactome-based prediction of viral protein hotspots targeting host proteins: a case study for HIV Nef. PLoS One 2011;6:e20735. [PMID: 21738584 DOI: 10.1371/journal.pone.0020735] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 0.8] [Reference Citation Analysis]
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1 James K, Muñoz-Muñoz J. Computational Network Inference for Bacterial Interactomics. mSystems 2022;:e0145621. [PMID: 35353009 DOI: 10.1128/msystems.01456-21] [Reference Citation Analysis]
2 Lyon KF, Cai X, Young RJ, Mamun AA, Rajasekaran S, Schiller MR. Minimotif Miner 4: a million peptide minimotifs and counting. Nucleic Acids Res 2018;46:D465-70. [PMID: 29140456 DOI: 10.1093/nar/gkx1085] [Cited by in Crossref: 9] [Cited by in F6Publishing: 9] [Article Influence: 3.0] [Reference Citation Analysis]
3 Chen J, Sun J, Liu X, Liu F, Liu R, Wang J. Structure-based prediction of West Nile virus-human protein-protein interactions. J Biomol Struct Dyn 2019;37:2310-21. [PMID: 30044201 DOI: 10.1080/07391102.2018.1479659] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
4 Sharma S, Young RJ, Chen J, Chen X, Oh EC, Schiller MR. Minimotifs dysfunction is pervasive in neurodegenerative disorders. Alzheimers Dement (N Y) 2018;4:414-32. [PMID: 30225339 DOI: 10.1016/j.trci.2018.06.005] [Reference Citation Analysis]
5 Martínez-Bonet M, Palladino C, Briz V, Rudolph JM, Fackler OT, Relloso M, Muñoz-Fernandez MA, Madrid R. A Conserved GPG-Motif in the HIV-1 Nef Core Is Required for Principal Nef-Activities. PLoS One 2015;10:e0145239. [PMID: 26700863 DOI: 10.1371/journal.pone.0145239] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.1] [Reference Citation Analysis]
6 Ayers D, Day PJ. Systems Medicine: The Application of Systems Biology Approaches for Modern Medical Research and Drug Development. Mol Biol Int 2015;2015:698169. [PMID: 26357572 DOI: 10.1155/2015/698169] [Cited by in Crossref: 40] [Cited by in F6Publishing: 28] [Article Influence: 5.7] [Reference Citation Analysis]
7 Chemes LB, de Prat-gay G, Sánchez IE. Convergent evolution and mimicry of protein linear motifs in host–pathogen interactions. Current Opinion in Structural Biology 2015;32:91-101. [DOI: 10.1016/j.sbi.2015.03.004] [Cited by in Crossref: 28] [Cited by in F6Publishing: 32] [Article Influence: 4.0] [Reference Citation Analysis]
8 Sargeant DP, Deverasetty S, Strong CL, Alaniz IJ, Bartlett A, Brandon NR, Brooks SB, Brown FA, Bufi F, Chakarova M, David RP, Dobritch KM, Guerra HP, Hedden MW, Kumra R, Levitt KS, Mathew KR, Matti R, Maza DQ, Mistry S, Novakovic N, Pomerantz A, Portillo J, Rafalski TF, Rathnayake VR, Rezapour N, Songao S, Tuggle SL, Yousif S, Dorsky DI, Schiller MR. The HIVToolbox 2 web system integrates sequence, structure, function and mutation analysis. PLoS One 2014;9:e98810. [PMID: 24886930 DOI: 10.1371/journal.pone.0098810] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 0.5] [Reference Citation Analysis]
9 Arnold R, Boonen K, Sun MG, Kim PM. Computational analysis of interactomes: current and future perspectives for bioinformatics approaches to model the host-pathogen interaction space. Methods 2012;57:508-18. [PMID: 22750305 DOI: 10.1016/j.ymeth.2012.06.011] [Cited by in Crossref: 38] [Cited by in F6Publishing: 33] [Article Influence: 3.8] [Reference Citation Analysis]