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For: Faner R, Sibila O, Agustí A, Bernasconi E, Chalmers JD, Huffnagle GB, Manichanh C, Molyneaux PL, Paredes R, Pérez Brocal V, Ponomarenko J, Sethi S, Dorca J, Monsó E. The microbiome in respiratory medicine: current challenges and future perspectives. Eur Respir J 2017;49:1602086. [PMID: 28404649 DOI: 10.1183/13993003.02086-2016] [Cited by in Crossref: 101] [Cited by in F6Publishing: 96] [Article Influence: 20.2] [Reference Citation Analysis]
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16 Sommariva M, Le Noci V, Bianchi F, Camelliti S, Balsari A, Tagliabue E, Sfondrini L. The lung microbiota: role in maintaining pulmonary immune homeostasis and its implications in cancer development and therapy. Cell Mol Life Sci 2020;77:2739-49. [PMID: 31974656 DOI: 10.1007/s00018-020-03452-8] [Cited by in Crossref: 27] [Cited by in F6Publishing: 29] [Article Influence: 13.5] [Reference Citation Analysis]
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18 Agustí A, Celli B, Faner R. What does endotyping mean for treatment in chronic obstructive pulmonary disease? The Lancet 2017;390:980-7. [DOI: 10.1016/s0140-6736(17)32136-0] [Cited by in Crossref: 41] [Cited by in F6Publishing: 28] [Article Influence: 8.2] [Reference Citation Analysis]
19 Bach LL, Ram A, Ijaz UZ, Evans TJ, Lindström J. A Longitudinal Study of the Human Oropharynx Microbiota Over Time Reveals a Common Core and Significant Variations With Self-Reported Disease. Front Microbiol 2020;11:573969. [PMID: 33552004 DOI: 10.3389/fmicb.2020.573969] [Reference Citation Analysis]
20 Tong X, Su F, Xu X, Xu H, Yang T, Xu Q, Dai H, Huang K, Zou L, Zhang W, Pei S, Xiao F, Li Y, Wang C. Alterations to the Lung Microbiome in Idiopathic Pulmonary Fibrosis Patients. Front Cell Infect Microbiol 2019;9:149. [PMID: 31165050 DOI: 10.3389/fcimb.2019.00149] [Cited by in Crossref: 9] [Cited by in F6Publishing: 7] [Article Influence: 3.0] [Reference Citation Analysis]
21 Waagsbø B, Buset EM, Longva JÅ, Bjerke M, Bakkene B, Ertesvåg AS, Holmen H, Nikodojevic M, Tran TT, Christensen A, Nilsen E, Damås JK, Heggelund L. Diagnostic stewardship aiming at expectorated or induced sputum promotes microbial diagnosis in community-acquired pneumonia. BMC Infect Dis 2022;22:203. [PMID: 35236305 DOI: 10.1186/s12879-022-07199-4] [Reference Citation Analysis]
22 Lu HF, Li A, Zhang T, Ren ZG, He KX, Zhang H, Yang JZ, Luo QX, Zhou K, Chen CL, Chen XL, Wu ZW, Li LJ. Disordered oropharyngeal microbial communities in H7N9 patients with or without secondary bacterial lung infection. Emerg Microbes Infect 2017;6:e112. [PMID: 29259328 DOI: 10.1038/emi.2017.101] [Cited by in Crossref: 19] [Cited by in F6Publishing: 24] [Article Influence: 3.8] [Reference Citation Analysis]
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25 Xiong Y, Hu S, Zhou H, Zeng H, He X, Huang D, Li X. High-throughput 16S rDNA sequencing of the pulmonary microbiome of rats with allergic asthma. Genes Dis 2020;7:272-82. [PMID: 32215297 DOI: 10.1016/j.gendis.2019.03.006] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
26 Liang Z, Zhong N, Chen R, Ma Q, Sun Y, Wen F, Tal-Singer R, Miller BE, Yates J, Song J, Compton C, Ji B, Wu L, Yang Y, Jones P, Zheng J. Investigation of the Clinical, Radiological and Biological Factors Associated with Disease Progression, Phenotypes and Endotypes of COPD in China (COMPASS): study design, protocol and rationale. ERJ Open Res 2021;7:00201-2021. [PMID: 34527722 DOI: 10.1183/23120541.00201-2021] [Reference Citation Analysis]
27 Smith AH, Chalmers JD. The microbiome in bronchiectasis: Cutting a lung story short. Respirology 2019;25:43-4. [DOI: 10.1111/resp.13697] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
28 Loverdos K, Bellos G, Kokolatou L, Vasileiadis I, Giamarellos E, Pecchiari M, Koulouris N, Koutsoukou A, Rovina N. Lung Microbiome in Asthma: Current Perspectives. J Clin Med 2019;8:E1967. [PMID: 31739446 DOI: 10.3390/jcm8111967] [Cited by in Crossref: 16] [Cited by in F6Publishing: 13] [Article Influence: 5.3] [Reference Citation Analysis]
29 Si J, Choi Y, Raes J, Ko G, You HJ. Sputum Bacterial Metacommunities in Distinguishing Heterogeneity in Respiratory Health and Disease. Front Microbiol 2022;13:719541. [DOI: 10.3389/fmicb.2022.719541] [Reference Citation Analysis]
30 Shoemark A, Cant E, Carreto L, Smith A, Oriano M, Keir HR, Perea L, Canto E, Terranova L, Vidal S, Moffitt K, Aliberti S, Sibila O, Chalmers JD. A point-of-care neutrophil elastase activity assay identifies bronchiectasis severity, airway infection and risk of exacerbation. Eur Respir J 2019;53:1900303. [DOI: 10.1183/13993003.00303-2019] [Cited by in Crossref: 23] [Cited by in F6Publishing: 21] [Article Influence: 7.7] [Reference Citation Analysis]
31 Fazlollahi M, Lee TD, Andrade J, Oguntuyo K, Chun Y, Grishina G, Grishin A, Bunyavanich S. The nasal microbiome in asthma. J Allergy Clin Immunol 2018;142:834-843.e2. [PMID: 29518419 DOI: 10.1016/j.jaci.2018.02.020] [Cited by in Crossref: 32] [Cited by in F6Publishing: 39] [Article Influence: 8.0] [Reference Citation Analysis]
32 Pillarisetti N, Broderick D, Ainsworth A, Mulholland A, Wagner Mackenzie B, Middleton D, Byrnes CA, Taylor MW. The airway microbiota in children newly diagnosed with bronchiectasis largely retains its diversity. Eur Respir J 2019;54:1900704. [PMID: 31023855 DOI: 10.1183/13993003.00704-2019] [Reference Citation Analysis]
33 Vendl C, Ferrari BC, Thomas T, Slavich E, Zhang E, Nelson T, Rogers T. Interannual comparison of core taxa and community composition of the blow microbiota from East Australian humpback whales. FEMS Microbiol Ecol 2019;95:fiz102. [PMID: 31260051 DOI: 10.1093/femsec/fiz102] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 3.0] [Reference Citation Analysis]
34 Centeno-Martinez RE, Glidden N, Mohan S, Davidson JL, Fernández-Juricic E, Boerman JP, Schoonmaker J, Pillai D, Koziol J, Ault A, Verma MS, Johnson TA. Identification of bovine respiratory disease through the nasal microbiome. Anim Microbiome 2022;4:15. [PMID: 35193707 DOI: 10.1186/s42523-022-00167-y] [Reference Citation Analysis]
35 Arneitz C, Windhaber J, Castellani C, Kienesberger B, Klymiuk I, Fasching G, Till H, Singer G. Cardiorespiratory performance capacity and airway microbiome in patients following primary repair of esophageal atresia. Pediatr Res 2021;90:66-73. [PMID: 33159185 DOI: 10.1038/s41390-020-01222-7] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
36 Maleki A, Zamirnasta M, Taherikalani M, Pakzad I, Mohammadi J, Krutova M, Kouhsari E, Sadeghifard N. The characterization of bacterial communities of oropharynx microbiota in healthy children by combining culture techniques and sequencing of the 16S rRNA gene. Microb Pathog 2020;143:104115. [PMID: 32135220 DOI: 10.1016/j.micpath.2020.104115] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
37 Porsbjerg C, Sverrild A, Baines KJ, Searles A, Maltby S, Foster PS, Brightling C, Gibson PG. Advancing the management of obstructive airways diseases through translational research. Clin Exp Allergy 2018;48:493-501. [PMID: 29412485 DOI: 10.1111/cea.13112] [Reference Citation Analysis]
38 Latgé JP, Chamilos G. Aspergillus fumigatus and Aspergillosis in 2019. Clin Microbiol Rev 2019;33:e00140-18. [PMID: 31722890 DOI: 10.1128/CMR.00140-18] [Cited by in Crossref: 140] [Cited by in F6Publishing: 97] [Article Influence: 46.7] [Reference Citation Analysis]
39 Saladié M, Caparrós-Martín JA, Agudelo-Romero P, Wark PAB, Stick SM, O'Gara F. Microbiomic Analysis on Low Abundant Respiratory Biomass Samples; Improved Recovery of Microbial DNA From Bronchoalveolar Lavage Fluid. Front Microbiol 2020;11:572504. [PMID: 33123104 DOI: 10.3389/fmicb.2020.572504] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
40 Hilty M, Wüthrich TM, Godel A, Adelfio R, Aebi S, Burgener SS, Illgen-Wilcke B, Benarafa C. Chronic cigarette smoke exposure and pneumococcal infection induce oropharyngeal microbiota dysbiosis and contribute to long-lasting lung damage in mice. Microb Genom 2020;6. [PMID: 33295863 DOI: 10.1099/mgen.0.000485] [Reference Citation Analysis]
41 Amaro R, Perea L, Sibila O. Future Directions in Bronchiectasis Research. Clinics in Chest Medicine 2022;43:179-87. [DOI: 10.1016/j.ccm.2021.12.005] [Reference Citation Analysis]
42 Fong KM, Welte T; Forum of International Respiratory Societies (FIRS). World Lung Day: what, why, and where to? Am J Physiol Lung Cell Mol Physiol 2020;319:L527-33. [PMID: 32783632 DOI: 10.1152/ajplung.00364.2020] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
43 Chu S, Cheng Z, Yin Z, Xu J, Wu F, Jin Y, Yang G. Airway Fusobacterium is Associated with Poor Response to Immunotherapy in Lung Cancer. OTT 2022;Volume 15:201-13. [DOI: 10.2147/ott.s348382] [Reference Citation Analysis]
44 Dubowski K, Kaali S, Jack D, Prah RKD, Clemente JC, Tawiah T, Mujtaba M, Iddrisu L, Carrión D, Konadu DG, Agyei O, Kornu FM, Osei-Owusu S, Lee AG, Asante KP. Infant Nasopharyngeal Microbiota Subphenotypes and Early Childhood Lung Function: Evidence from a Rural Ghanaian Pregnancy Cohort. Int J Environ Res Public Health 2021;18:7276. [PMID: 34299726 DOI: 10.3390/ijerph18147276] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
45 Chen J, Jin Y, Yang Y, Wu Z, Wu G. Epithelial Dysfunction in Lung Diseases: Effects of Amino Acids and Potential Mechanisms. Adv Exp Med Biol 2020;1265:57-70. [PMID: 32761570 DOI: 10.1007/978-3-030-45328-2_4] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
46 Reinhold L, Möllering A, Wallis S, Palade E, Schäfer K, Drömann D, Rupp J, Graspeuntner S, Dalhoff K. Dissimilarity of Airway and Lung Tissue Microbiota in Smokers undergoing Surgery for Lung Cancer. Microorganisms 2020;8:E794. [PMID: 32466482 DOI: 10.3390/microorganisms8060794] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]
47 Cho SY, Choi JH, Lee SH, Choi YS, Hwang SW, Kim YJ. Metataxonomic investigation of the microbial community in the trachea and oropharynx of healthy controls and diabetic patients using endotracheal tubes. PLoS One 2021;16:e0259596. [PMID: 34739518 DOI: 10.1371/journal.pone.0259596] [Reference Citation Analysis]
48 Heaney LM. Applying mass spectrometry-based assays to explore gut microbial metabolism and associations with disease. Clinical Chemistry and Laboratory Medicine (CCLM) 2020;58:719-32. [DOI: 10.1515/cclm-2019-0974] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
49 Goolam Mahomed T, Peters R, Pretorius G, Goolam Mahomed A, Ueckermann V, Kock MM, Ehlers MM. Comparison of targeted metagenomics and IS-Pro methods for analysing the lung microbiome. BMC Microbiol 2021;21:228. [PMID: 34407769 DOI: 10.1186/s12866-021-02288-x] [Reference Citation Analysis]
50 Agustí A, Bafadhel M, Beasley R, Bel EH, Faner R, Gibson PG, Louis R, McDonald VM, Sterk PJ, Thomas M, Vogelmeier C, Pavord ID; on behalf of all participants in the seminar. Precision medicine in airway diseases: moving to clinical practice. Eur Respir J 2017;50:1701655. [PMID: 29051276 DOI: 10.1183/13993003.01655-2017] [Cited by in Crossref: 81] [Cited by in F6Publishing: 80] [Article Influence: 16.2] [Reference Citation Analysis]
51 Nazareth R, Chasqueira MJ, Rodrigues ML, Paulino C, Conceição C, Lêdo L, Segura Ú, Santos M, Messias A, Póvoa P, Paixão P. Respiratory viruses in mechanically ventilated patients: a pilot study. BMC Pulm Med 2020;20:39. [PMID: 32054471 DOI: 10.1186/s12890-020-1082-5] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
52 Cho DY, Hunter RC, Ramakrishnan VR. The Microbiome and Chronic Rhinosinusitis. Immunol Allergy Clin North Am 2020;40:251-63. [PMID: 32278449 DOI: 10.1016/j.iac.2019.12.009] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 1.5] [Reference Citation Analysis]
53 Vendl C, Nelson T, Ferrari B, Thomas T, Rogers T. Highly abundant core taxa in the blow within and across captive bottlenose dolphins provide evidence for a temporally stable airway microbiota. BMC Microbiol 2021;21:20. [PMID: 33421992 DOI: 10.1186/s12866-020-02076-z] [Reference Citation Analysis]
54 Fabbrizzi A, Nannini G, Lavorini F, Tomassetti S, Amedei A. Microbiota and IPF: hidden and detected relationships. Sarcoidosis Vasc Diffuse Lung Dis 2021;38:e2021028. [PMID: 34744424 DOI: 10.36141/svdld.v38i3.11365] [Reference Citation Analysis]
55 Mustansir Dawoodbhoy F, Patel BK, Patel K, Bhatia M, Lee CN, Moochhala SM. Gut Microbiota Dysbiosis as a Target for Improved Post-Surgical Outcomes and Improved Patient Care: A Review of Current Literature. Shock 2021;55:441-54. [PMID: 32881759 DOI: 10.1097/SHK.0000000000001654] [Cited by in Crossref: 1] [Article Influence: 0.5] [Reference Citation Analysis]
56 Fastrès A, Felice F, Roels E, Moermans C, Corhay JL, Bureau F, Louis R, Clercx C, Guiot J. The Lung Microbiome in Idiopathic Pulmonary Fibrosis: A Promising Approach for Targeted Therapies. Int J Mol Sci 2017;18:E2735. [PMID: 29258183 DOI: 10.3390/ijms18122735] [Cited by in Crossref: 23] [Cited by in F6Publishing: 22] [Article Influence: 4.6] [Reference Citation Analysis]
57 Mori G, Morrison M, Blumenthal A. Microbiome-immune interactions in tuberculosis. PLoS Pathog 2021;17:e1009377. [PMID: 33857251 DOI: 10.1371/journal.ppat.1009377] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
58 Thornton CS, Mellett M, Jarand J, Barss L, Field SK, Fisher DA. The respiratory microbiome and nontuberculous mycobacteria: an emerging concern in human health. Eur Respir Rev 2021;30:200299. [PMID: 34039671 DOI: 10.1183/16000617.0299-2020] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
59 Le Souëf P. Viral infections in wheezing disorders. Eur Respir Rev 2018;27:170133. [DOI: 10.1183/16000617.0133-2017] [Cited by in Crossref: 12] [Cited by in F6Publishing: 9] [Article Influence: 3.0] [Reference Citation Analysis]
60 Chalmers JD, Chang AB, Chotirmall SH, Dhar R, McShane PJ. Bronchiectasis. Nat Rev Dis Primers 2018;4:45. [PMID: 30442957 DOI: 10.1038/s41572-018-0042-3] [Cited by in Crossref: 57] [Cited by in F6Publishing: 60] [Article Influence: 14.3] [Reference Citation Analysis]
61 Santacroce L, Charitos IA, Ballini A, Inchingolo F, Luperto P, De Nitto E, Topi S. The Human Respiratory System and its Microbiome at a Glimpse. Biology (Basel) 2020;9:E318. [PMID: 33019595 DOI: 10.3390/biology9100318] [Cited by in Crossref: 27] [Cited by in F6Publishing: 29] [Article Influence: 13.5] [Reference Citation Analysis]
62 Diel R, Ewig S, Blaas S, Jacob C, Juelich F, Korfmann G, Sohrab S, Sutharsan S, Rademacher J. Incidence of patients with non-cystic fibrosis bronchiectasis in Germany - A healthcare insurance claims data analysis. Respir Med 2019;151:121-7. [PMID: 31047108 DOI: 10.1016/j.rmed.2019.04.007] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 1.3] [Reference Citation Analysis]
63 Millares L, Pascual S, Montón C, García-Núñez M, Lalmolda C, Faner R, Casadevall C, Setó L, Capilla S, Moreno A, Castro-Acosta AA, Alvarez-Martinez CJ, Sibila O, Peces-Barba G, Cosio BG, Agustí A, Gea J, Monsó E. Relationship between the respiratory microbiome and the severity of airflow limitation, history of exacerbations and circulating eosinophils in COPD patients. BMC Pulm Med 2019;19:112. [PMID: 31234826 DOI: 10.1186/s12890-019-0867-x] [Cited by in Crossref: 10] [Cited by in F6Publishing: 11] [Article Influence: 3.3] [Reference Citation Analysis]
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