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Rios FGF, Alves do Nascimento V, Naveca FG, Vieira DS, Julião GR. Arbovirus detection in synanthropic mosquitoes from the Brazilian Amazon and in mosquito saliva using Flinders Technology Associates cards. Microbes Infect 2023;25:105046. [PMID: 36167274 DOI: 10.1016/j.micinf.2022.105046] [Reference Citation Analysis]
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Zhao M, Plough LV, Behringer DC, Bojko J, Kough AS, Alper NW, Xu L, Schott EJ. Cross-Hemispheric Genetic Diversity and Spatial Genetic Structure of Callinectes sapidus Reovirus 1 (CsRV1). Viruses 2023;15. [PMID: 36851777 DOI: 10.3390/v15020563] [Reference Citation Analysis]
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Wang MX, Lou EG, Sapoval N, Kim E, Kalvapalle P, Kille B, Elworth RAL, Liu Y, Fu Y, Stadler LB, Treangen TJ. Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes. bioRxiv 2023:2023. [PMID: 36824759 DOI: 10.1101/2023.02.11.528155] [Reference Citation Analysis]
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Oliveira G, Vogels CBF, Zolfaghari A, Saraf S, Klitting R, Weger-Lucarelli J, P Leon K, Ontiveros CO, Agarwal R, Tsetsarkin KA, Harris E, Ebel GD, Wohl S, Grubaugh ND, Andersen KG. Genomic and phenotypic analyses suggest moderate fitness differences among Zika virus lineages. PLoS Negl Trop Dis 2023;17:e0011055. [PMID: 36753510 DOI: 10.1371/journal.pntd.0011055] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
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Lin Y, Dai Y, Zhang S, Guo H, Yang L, Li J, Wang K, Ni M, Hu Z, Jia L, Liu H, Li P, Song H. Application of nanopore adaptive sequencing in pathogen detection of a patient with Chlamydia psittaci infection. Front Cell Infect Microbiol 2023;13:1064317. [PMID: 36756615 DOI: 10.3389/fcimb.2023.1064317] [Reference Citation Analysis]
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Cho AY, Kim TH, Lee SH, Lee H, Choi YJ, Seo YR, Lee DH, Hyeon JY, Song CS. Whole genome sequencing of Avian metapneumovirus type B genomes directly from clinical samples collected from chickens in live bird markets using multiplex tiling RT-PCR method. Front Vet Sci 2023;10:1112552. [PMID: 36937007 DOI: 10.3389/fvets.2023.1112552] [Reference Citation Analysis]
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Maes M, Khokhar F, Wilkinson SAJ, Smith AD, Kovalenko G, Dougan G, Quick J, Loman NJ, Baker S, Curran MD, Skittrall JP, Houldcroft CJ. Multiplex MinION sequencing suggests enteric adenovirus F41 genetic diversity comparable to pre-COVID-19 era. Microb Genom 2023;9. [PMID: 36748435 DOI: 10.1099/mgen.0.000920] [Reference Citation Analysis]
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Wardhani P, Yohan B, Tanzilia M, Sunari EP, Wrahatnala BJ, Hakim FKN, Rohman A, Husada D, Hayati RF, Santoso MS, Sievers JTO, Aryati A, Sasmono RT. Genetic characterization of dengue virus 4 complete genomes from East Java, Indonesia. Virus Genes 2023;59:36-44. [PMID: 36266496 DOI: 10.1007/s11262-022-01942-4] [Reference Citation Analysis]
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Su YCF, Ma JZJ, Ou TP, Pum L, Krang S, Raftery P, Kinzer MH, Bohl J, Ieng V, Kab V, Patel S, Sar B, Ying WF, Jayakumar J, Horm VS, Boukli N, Yann S, Troupin C, Heang V, Garcia-Rivera JA, Sengdoeurn Y, Heng S, Lay S, Chea S, Darapheak C, Savuth C, Khalakdina A, Ly S, Baril L, Manning JE, Simone-Loriere E, Duong V, Dussart P, Sovann L, Smith GJD, Karlsson EA. Genomic epidemiology of SARS-CoV-2 in Cambodia, January 2020 to February 2021. Virus Evol 2023;9:veac121. [PMID: 36654682 DOI: 10.1093/ve/veac121] [Reference Citation Analysis]
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Ashall J, Shah S, Biggs JR, Chang JR, Jafari Y, Brady OJ, Mai HK, Lien LT, Do Thai H, Nguyen HAT, Anh DD, Iwasaki C, Kitamura N, Van Loock M, Herrera-Taracena G, Rasschaert F, Van Wesenbeeck L, Yoshida LM, Hafalla JCR, Hue S, Hibberd ML. A phylogenetic study of dengue virus in urban Vietnam shows long-term persistence of endemic strains. Virus Evol 2023;9:vead012. [PMID: 36926448 DOI: 10.1093/ve/vead012] [Reference Citation Analysis]
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