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For: Chakraborty S. E484K and N501Y SARS-CoV 2 spike mutants Increase ACE2 recognition but reduce affinity for neutralizing antibody. Int Immunopharmacol 2022;102:108424. [PMID: 34915409 DOI: 10.1016/j.intimp.2021.108424] [Cited by in Crossref: 19] [Cited by in F6Publishing: 20] [Article Influence: 9.5] [Reference Citation Analysis]
Number Citing Articles
1 Newby ML, Fogarty CA, Allen JD, Butler J, Fadda E, Crispin M. Variations within the Glycan Shield of SARS-CoV-2 Impact Viral Spike Dynamics. J Mol Biol 2022;435:167928. [PMID: 36565991 DOI: 10.1016/j.jmb.2022.167928] [Reference Citation Analysis]
2 Barnes JE, Lund-Andersen PK, Patel JS, Ytreberg FM. The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6. Sci Rep 2022;12:18819. [PMID: 36335244 DOI: 10.1038/s41598-022-23482-5] [Reference Citation Analysis]
3 Gunawardana D. Genetic, Structural, Physicochemical, and Molecular Epidemiological Landscape of Three New Mutations Found in the Spike (S) Protein of Highly Transmissible Sri Lankan Delta Variant Sub-lineage AY.28: A222V, A701S, and A1078S. Journal of Environmental and Public Health 2022;2022:1-8. [DOI: 10.1155/2022/4364131] [Reference Citation Analysis]
4 Asif A, Ilyas I, Abdullah M, Sarfraz S, Mustafa M, Mahmood A. The Comparison of Mutational Progression in SARS-CoV-2: A Short Updated Overview. JMP 2022;3:201-218. [DOI: 10.3390/jmp3040018] [Reference Citation Analysis]
5 Pulit-Penaloza JA, Belser JA, Sun X, Pappas C, Brock N, Kieran TJ, Ritter JM, Seixas JN, Jones J, Basu Thakur P, Pusch E, Wang L, Tumpey TM, Wentworth DE, Zhou B, Maines TR. Comparative Assessment of Severe Acute Respiratory Syndrome Coronavirus 2 Variants in the Ferret Model. mBio 2022;:e0242122. [PMID: 36135377 DOI: 10.1128/mbio.02421-22] [Reference Citation Analysis]
6 Coderc de Lacam EG, Blazhynska M, Chen H, Gumbart JC, Chipot C. When the Dust Has Settled: Calculation of Binding Affinities from First Principles for SARS-CoV-2 Variants with Quantitative Accuracy. J Chem Theory Comput . [DOI: 10.1021/acs.jctc.2c00604] [Reference Citation Analysis]
7 Sinha S, Tam B, Wang SM. Applications of Molecular Dynamics Simulation in Protein Study. Membranes 2022;12:844. [DOI: 10.3390/membranes12090844] [Reference Citation Analysis]
8 Chakraborty S, Saha A, Saha C, Ghosh S, Mondal T. Decoding the effects of spike receptor binding domain mutations on antibody escape abilities of omicron variants. Biochem Biophys Res Commun 2022;627:168-75. [PMID: 36041326 DOI: 10.1016/j.bbrc.2022.08.050] [Reference Citation Analysis]
9 Barozi V, Edkins AL, Tastan Bishop Ö. Evolutionary progression of collective mutations in Omicron sub-lineages towards efficient RBD-hACE2: Allosteric communications between and within viral and human proteins. Comput Struct Biotechnol J 2022;20:4562-78. [PMID: 35989699 DOI: 10.1016/j.csbj.2022.08.015] [Reference Citation Analysis]
10 Newby ML, Fogarty CA, Allen JD, Butler J, Fadda E, Crispin M. Natural variations within the glycan shield of SARS-CoV-2 impact viral spike dynamics.. [DOI: 10.1101/2022.08.17.504157] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
11 Barozi V, Edkins AL, Bishop ÖT. Evolutionary progression of collective mutations in Omicron sub-lineages towards efficient RBD-hACE2: allosteric communications between and within viral and human proteins.. [DOI: 10.1101/2022.08.06.503019] [Reference Citation Analysis]
12 Chakraborty S, Ghosh S, Mondal T. Decoding molecular factors shaping human angiotensin converting enzyme 2 receptor usage by spike glycoprotein in lineage B beta-coronaviruses. Biochim Biophys Acta Mol Basis Dis 2022;:166514. [PMID: 35932890 DOI: 10.1016/j.bbadis.2022.166514] [Reference Citation Analysis]
13 Chakraborty S, Saha A, Saha C, Ghosh S, Mondal T. Decoding the Effects of Spike Receptor Binding Domain Mutations on Antibody Escape Abilities of Omicron Variants.. [DOI: 10.1101/2022.07.21.500931] [Reference Citation Analysis]
14 Chakraborty C, Bhattacharya M, Sharma AR, Dhama K, Lee SS. Continent-wide evolutionary trends of emerging SARS-CoV-2 variants: dynamic profiles from Alpha to Omicron. Geroscience 2022;44:2371-92. [PMID: 35831773 DOI: 10.1007/s11357-022-00619-y] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
15 Haycroft ER, Davis SK, Ramanathan P, Lopez E, Purcell RA, Tan LL, Pymm P, Wines BD, Hogarth PM, Wheatley AK, Juno JA, Redmond S, Gheradin NA, Godfrey DI, Tham W, Selva KJ, Kent SJ, Chung AW. Altered affinity to ACE2 and reduced Fc functional antibodies to SARS-CoV-2 RBD variants.. [DOI: 10.1101/2022.07.07.22277364] [Reference Citation Analysis]
16 Tahsin A, Ahmed R, Bhattacharjee P, Adiba M, Al Saba A, Yasmin T, Chakraborty S, Hasan AM, Nabi AN. Most frequently harboured missense variants of hACE2 across different populations exhibit varying patterns of binding interaction with spike glycoproteins of emerging SARS-CoV-2 of different lineages. Computers in Biology and Medicine 2022. [DOI: 10.1016/j.compbiomed.2022.105903] [Reference Citation Analysis]
17 Abbasian MH, Mahdavi B, Mahmanzar M, Tokhanbigli S, Sisakht MM, Moradi B, Rahimian K, Najmabadi H. Analysis of Whole-Genome Sequencing of SARS-CoV-2 Reveals Recurrent Mutations among Iranian Patients.. [DOI: 10.1101/2022.06.20.22276625] [Reference Citation Analysis]
18 Chen Y, Liu Q, Zhou L, Zhou Y, Yan H, Lan K. Emerging SARS-CoV-2 variants: Why, how, and what's next? Cell Insight 2022;1:100029. [DOI: 10.1016/j.cellin.2022.100029] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
19 Kumar R, Murugan NA, Srivastava V. Improved Binding Affinity of Omicron's Spike Protein for the Human Angiotensin-Converting Enzyme 2 Receptor Is the Key behind Its Increased Virulence. Int J Mol Sci 2022;23:3409. [PMID: 35328828 DOI: 10.3390/ijms23063409] [Cited by in Crossref: 14] [Cited by in F6Publishing: 12] [Article Influence: 14.0] [Reference Citation Analysis]
20 Chouikha A, Fares W, Laamari A, Haddad-boubaker S, Belaiba Z, Ghedira K, Kammoun Rebai W, Ayouni K, Khedhiri M, Ben Halima S, Krichen H, Touzi H, Ben Dhifallah I, Guerfali FZ, Atri C, Azouz S, Khamessi O, Ardhaoui M, Safer M, Ben Alaya N, Guizani I, Kefi R, Gdoura M, Triki H. Molecular Epidemiology of SARS-CoV-2 in Tunisia (North Africa) through Several Successive Waves of COVID-19. Viruses 2022;14:624. [DOI: 10.3390/v14030624] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
21 Kumar R, Murugan NA, Srivastava V. Improved binding affinity of the Omicron’s spike protein with hACE2 receptor is the key factor behind its increased virulence.. [DOI: 10.1101/2021.12.28.474338] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]