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For: Brockhurst MA, Harrison E, Hall JP, Richards T, Mcnally A, Maclean C. The Ecology and Evolution of Pangenomes. Current Biology 2019;29:R1094-103. [DOI: 10.1016/j.cub.2019.08.012] [Cited by in Crossref: 68] [Cited by in F6Publishing: 46] [Article Influence: 22.7] [Reference Citation Analysis]
Number Citing Articles
1 Bottery MJ. Ecological dynamics of plasmid transfer and persistence in microbial communities. Current Opinion in Microbiology 2022;68:102152. [DOI: 10.1016/j.mib.2022.102152] [Reference Citation Analysis]
2 Wang Y, Ma L, He J, Liu Z, Weng S, Wang L, He J, Guo C. Whole genome sequencing and comparative genomic analyses of Planococcus alpniumensis MSAK28401T, a new species isolated from Antarctic krill. BMC Microbiol 2021;21:288. [PMID: 34686131 DOI: 10.1186/s12866-021-02347-3] [Reference Citation Analysis]
3 Almeida OGG, Furlan JPR, Stehling EG, De Martinis ECP. Comparative phylo-pangenomics reveals generalist lifestyles in representative Acinetobacter species and proposes candidate gene markers for species identification. Gene 2021;791:145707. [PMID: 33979679 DOI: 10.1016/j.gene.2021.145707] [Reference Citation Analysis]
4 Rivera-ramírez A, Salgado-morales R, Jiménez-pérez A, Pérez-martínez R, García-gómez BI, Dantán-gonzález E. Comparative Genomics and Pathogenicity Analysis of Two Bacterial Symbionts of Entomopathogenic Nematodes: The Role of the GroEL Protein in Virulence. Microorganisms 2022;10:486. [DOI: 10.3390/microorganisms10030486] [Reference Citation Analysis]
5 Kurushima J, Campo N, van Raaphorst R, Cerckel G, Polard P, Veening JW. Unbiased homeologous recombination during pneumococcal transformation allows for multiple chromosomal integration events. Elife 2020;9:e58771. [PMID: 32965219 DOI: 10.7554/eLife.58771] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
6 Drott MT, Rush TA, Satterlee TR, Giannone RJ, Abraham PE, Greco C, Venkatesh N, Skerker JM, Glass NL, Labbé JL, Milgroom MG, Keller NP. Microevolution in the pansecondary metabolome of Aspergillus flavus and its potential macroevolutionary implications for filamentous fungi. Proc Natl Acad Sci U S A 2021;118:e2021683118. [PMID: 34016748 DOI: 10.1073/pnas.2021683118] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 3.0] [Reference Citation Analysis]
7 Jiao J, Zhang B, Li ML, Zhang Z, Tian CF. The zinc-finger bearing xenogeneic silencer MucR in α-proteobacteria balances adaptation and regulatory integrity. ISME J 2021. [PMID: 34584215 DOI: 10.1038/s41396-021-01118-2] [Reference Citation Analysis]
8 Man L, Klare WP, Dale AL, Cain JA, Cordwell SJ. Integrated mass spectrometry-based multi-omics for elucidating mechanisms of bacterial virulence. Biochem Soc Trans 2021:BST20191088. [PMID: 34374408 DOI: 10.1042/BST20191088] [Reference Citation Analysis]
9 Botelho J, Schulenburg H. The Role of Integrative and Conjugative Elements in Antibiotic Resistance Evolution. Trends Microbiol 2021;29:8-18. [PMID: 32536522 DOI: 10.1016/j.tim.2020.05.011] [Cited by in Crossref: 24] [Cited by in F6Publishing: 18] [Article Influence: 12.0] [Reference Citation Analysis]
10 van Vliet AHM, Charity OJ, Reuter M. A Campylobacter integrative and conjugative element with a CRISPR-Cas9 system targeting competing plasmids: a history of plasmid warfare? Microb Genom 2021;7. [PMID: 34766904 DOI: 10.1099/mgen.0.000729] [Reference Citation Analysis]
11 Weigel BL, Miranda KK, Fogarty EC, Watson AR, Pfister CA. Functional Insights into the Kelp Microbiome from Metagenome-Assembled Genomes. mSystems 2022;:e0142221. [PMID: 35642511 DOI: 10.1128/msystems.01422-21] [Reference Citation Analysis]
12 Grillová L, Robinson MT, Chanthongthip A, Vincent AT, Nieves C, Oppelt J, Mariet J, Lorioux C, Vongsouvath M, Mayxay M, Phonemeexay O, Rattanavong S, Phommasone K, Douangnouvong A, Šmajs D, Veyrier FJ, Newton PN, Picardeau M, Munoz-zanzi C. Genetic diversity of Leptospira isolates in Lao PDR and genome analysis of an outbreak strain. PLoS Negl Trop Dis 2021;15:e0010076. [DOI: 10.1371/journal.pntd.0010076] [Reference Citation Analysis]
13 Domingo-Sananes MR, McInerney JO. Mechanisms That Shape Microbial Pangenomes. Trends Microbiol 2021;29:493-503. [PMID: 33423895 DOI: 10.1016/j.tim.2020.12.004] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
14 Shi YM, Hirschmann M, Shi YN, Ahmed S, Abebew D, Tobias NJ, Grün P, Crames JJ, Pöschel L, Kuttenlochner W, Richter C, Herrmann J, Müller R, Thanwisai A, Pidot SJ, Stinear TP, Groll M, Kim Y, Bode HB. Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria. Nat Chem 2022. [PMID: 35469007 DOI: 10.1038/s41557-022-00923-2] [Reference Citation Analysis]
15 Köstlbacher S, Collingro A, Halter T, Schulz F, Jungbluth SP, Horn M. Pangenomics reveals alternative environmental lifestyles among chlamydiae. Nat Commun 2021;12:4021. [PMID: 34188040 DOI: 10.1038/s41467-021-24294-3] [Reference Citation Analysis]
16 Douglas GM, Shapiro BJ. Genic Selection Within Prokaryotic Pangenomes. Genome Biol Evol 2021;13:evab234. [PMID: 34665261 DOI: 10.1093/gbe/evab234] [Reference Citation Analysis]
17 Pincus NB, Ozer EA, Allen JP, Nguyen M, Davis JJ, Winter DR, Chuang CH, Chiu CH, Zamorano L, Oliver A, Hauser AR. A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates. mBio 2020;11:e01527-20. [PMID: 32843552 DOI: 10.1128/mBio.01527-20] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
18 Cao H, Xu H, Ning C, Xiang L, Ren Q, Zhang T, Zhang Y, Gao R. Multi-Omics Approach Reveals the Potential Core Vaccine Targets for the Emerging Foodborne Pathogen Campylobacter jejuni. Front Microbiol 2021;12:665858. [PMID: 34248875 DOI: 10.3389/fmicb.2021.665858] [Reference Citation Analysis]
19 de Almeida OGG, Vitulo N, De Martinis ECP, Felis GE. Pangenome analyses of LuxS-coding genes and enzymatic repertoires in cocoa-related lactic acid bacteria. Genomics 2021;113:1659-70. [PMID: 33839269 DOI: 10.1016/j.ygeno.2021.04.010] [Reference Citation Analysis]
20 Gautreau G, Bazin A, Gachet M, Planel R, Burlot L, Dubois M, Perrin A, Médigue C, Calteau A, Cruveiller S, Matias C, Ambroise C, Rocha EPC, Vallenet D. PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput Biol 2020;16:e1007732. [PMID: 32191703 DOI: 10.1371/journal.pcbi.1007732] [Cited by in Crossref: 22] [Cited by in F6Publishing: 15] [Article Influence: 11.0] [Reference Citation Analysis]
21 Behzadi P, Urbán E, Matuz M, Benkő R, Gajdács M. The Role of Gram-Negative Bacteria in Urinary Tract Infections: Current Concepts and Therapeutic Options. Adv Exp Med Biol 2021;1323:35-69. [PMID: 32596751 DOI: 10.1007/5584_2020_566] [Cited by in Crossref: 10] [Cited by in F6Publishing: 10] [Article Influence: 10.0] [Reference Citation Analysis]
22 Gabrielaite M, Johansen HK, Molin S, Nielsen FC, Marvig RL. Gene Loss and Acquisition in Lineages of Pseudomonas aeruginosa Evolving in Cystic Fibrosis Patient Airways. mBio 2020;11:e02359-20. [PMID: 33109761 DOI: 10.1128/mBio.02359-20] [Cited by in Crossref: 6] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
23 Billane K, Harrison E, Cameron D, Brockhurst MA. Why do plasmids manipulate the expression of bacterial phenotypes? Philos Trans R Soc Lond B Biol Sci 2022;377:20200461. [PMID: 34839708 DOI: 10.1098/rstb.2020.0461] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
24 Wheatley RM, MacLean RC. CRISPR-Cas systems restrict horizontal gene transfer in Pseudomonas aeruginosa. ISME J 2021;15:1420-33. [PMID: 33349652 DOI: 10.1038/s41396-020-00860-3] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 1.5] [Reference Citation Analysis]
25 Rosselli R, La Porta N, Muresu R, Stevanato P, Concheri G, Squartini A. Pangenomics of the Symbiotic Rhizobiales. Core and Accessory Functions Across a Group Endowed with High Levels of Genomic Plasticity. Microorganisms 2021;9:407. [PMID: 33669391 DOI: 10.3390/microorganisms9020407] [Reference Citation Analysis]
26 Hall JPJ, Harrison E, Pärnänen K, Virta M, Brockhurst MA. The Impact of Mercury Selection and Conjugative Genetic Elements on Community Structure and Resistance Gene Transfer. Front Microbiol 2020;11:1846. [PMID: 32849443 DOI: 10.3389/fmicb.2020.01846] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
27 Baltrus DA, Smith C, Derrick M, Leligdon C, Rosenthal Z, Mollico M, Moore A, Clark M. Genomic Background Governs Opposing Responses to Nalidixic Acid upon Megaplasmid Acquisition in Pseudomonas. mSphere 2021;6:e00008-21. [PMID: 33597171 DOI: 10.1128/mSphere.00008-21] [Reference Citation Analysis]
28 Ramsay JP, Bastholm TR, Verdonk CJ, Tambalo DD, Sullivan JT, Harold LK, Panganiban BA, Colombi E, Perry BJ, Jowsey W, Morris C, Hynes MF, Bond CS, Cameron ADS, Yost CK, Ronson CW. An epigenetic switch activates bacterial quorum sensing and horizontal transfer of an integrative and conjugative element. Nucleic Acids Res 2021:gkab1217. [PMID: 34904658 DOI: 10.1093/nar/gkab1217] [Reference Citation Analysis]
29 Wyres KL, Lam MMC, Holt KE. Population genomics of Klebsiella pneumoniae. Nat Rev Microbiol 2020;18:344-59. [PMID: 32055025 DOI: 10.1038/s41579-019-0315-1] [Cited by in Crossref: 106] [Cited by in F6Publishing: 81] [Article Influence: 53.0] [Reference Citation Analysis]
30 Banerjee R, Chaudhari NM, Lahiri A, Gautam A, Bhowmik D, Dutta C, Chattopadhyay S, Huson DH, Paul S. Interplay of Various Evolutionary Modes in Genome Diversification and Adaptive Evolution of the Family Sulfolobaceae. Front Microbiol 2021;12:639995. [PMID: 34248865 DOI: 10.3389/fmicb.2021.639995] [Reference Citation Analysis]
31 Shaw LP, Chau KK, Kavanagh J, AbuOun M, Stubberfield E, Gweon HS, Barker L, Rodger G, Bowes MJ, Hubbard ATM, Pickford H, Swann J, Gilson D, Smith RP, Hoosdally SJ, Sebra R, Brett H, Peto TEA, Bailey MJ, Crook DW, Read DS, Anjum MF, Walker AS, Stoesser N; REHAB consortium. Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae. Sci Adv 2021;7:eabe3868. [PMID: 33837077 DOI: 10.1126/sciadv.abe3868] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
32 Liu KH, Zhang B, Yang BS, Shi WT, Li YF, Wang Y, Zhang P, Jiao J, Tian CF. Rhizobiales-Specific RirA Represses a Naturally "Synthetic" Foreign Siderophore Gene Cluster To Maintain Sinorhizobium-Legume Mutualism. mBio 2022;:e0290021. [PMID: 35130720 DOI: 10.1128/mbio.02900-21] [Reference Citation Analysis]
33 Kottara A, Hall JPJ, Brockhurst MA. The proficiency of the original host species determines community-level plasmid dynamics. FEMS Microbiol Ecol 2021;97:fiab026. [PMID: 33580956 DOI: 10.1093/femsec/fiab026] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 2.0] [Reference Citation Analysis]
34 Sela I, Wolf YI, Koonin EV. Assessment of assumptions underlying models of prokaryotic pangenome evolution. BMC Biol 2021;19:27. [PMID: 33563283 DOI: 10.1186/s12915-021-00960-2] [Reference Citation Analysis]
35 Kottara A, Carrilero L, Harrison E, Hall JPJ, Brockhurst MA. The dilution effect limits plasmid horizontal transmission in multispecies bacterial communities. Microbiology (Reading) 2021;167. [PMID: 34494951 DOI: 10.1099/mic.0.001086] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
36 Whelan FJ, Rusilowicz M, McInerney JO. Coinfinder: detecting significant associations and dissociations in pangenomes. Microb Genom 2020;6. [PMID: 32100706 DOI: 10.1099/mgen.0.000338] [Cited by in Crossref: 6] [Cited by in F6Publishing: 4] [Article Influence: 3.0] [Reference Citation Analysis]
37 Carter MQ, Laniohan N, Lo C, Chain PSG. Comparative Genomics Applied to Systematically Assess Pathogenicity Potential in Shiga Toxin-Producing Escherichia coli O145:H28. Microorganisms 2022;10:866. [DOI: 10.3390/microorganisms10050866] [Reference Citation Analysis]
38 Hall RJ, Whelan FJ, Cummins EA, Connor C, McNally A, McInerney JO. Gene-gene relationships in an Escherichia coli accessory genome are linked to function and mobility. Microb Genom 2021;7. [PMID: 34499026 DOI: 10.1099/mgen.0.000650] [Reference Citation Analysis]
39 Butaitė E, Kramer J, Kümmerli R. Local adaptation, geographical distance and phylogenetic relatedness: Assessing the drivers of siderophore-mediated social interactions in natural bacterial communities. J Evol Biol 2021;34:1266-78. [PMID: 34101930 DOI: 10.1111/jeb.13883] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
40 Lau CH, Bolt EL. Integration of diverse DNA substrates by a casposase can be targeted to R-loops in vitro by its fusion to Cas9. Biosci Rep 2021;41:BSR20203595. [PMID: 33289517 DOI: 10.1042/BSR20203595] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
41 Matteoli FP, Pedrosa-Silva F, Dutra-Silva L, Giachini AJ. The global population structure and beta-lactamase repertoire of the opportunistic pathogen Serratia marcescens. Genomics 2021;113:3523-32. [PMID: 34400240 DOI: 10.1016/j.ygeno.2021.08.009] [Reference Citation Analysis]
42 Galla SJ, Brown L, Couch-Lewis Ngāi Tahu Te Hapū O Ngāti Wheke Ngāti Waewae Y, Cubrinovska I, Eason D, Gooley RM, Hamilton JA, Heath JA, Hauser SS, Latch EK, Matocq MD, Richardson A, Wold JR, Hogg CJ, Santure AW, Steeves TE. The relevance of pedigrees in the conservation genomics era. Mol Ecol 2021. [PMID: 34553796 DOI: 10.1111/mec.16192] [Reference Citation Analysis]
43 Uceda-campos G, Feitosa-junior OR, Santiago CRN, Pierry PM, Zaini PA, de Santana WO, Martins-junior J, Barbosa D, Digiampietri LA, Setubal JC, da Silva AM. Comparative Genomics of Xylella fastidiosa Explores Candidate Host-Specificity Determinants and Expands the Known Repertoire of Mobile Genetic Elements and Immunity Systems. Microorganisms 2022;10:914. [DOI: 10.3390/microorganisms10050914] [Reference Citation Analysis]
44 McMullen JG, Bueno E, Blow F, Douglas AE. Genome-Inferred Correspondence between Phylogeny and Metabolic Traits in the Wild Drosophila Gut Microbiome. Genome Biol Evol 2021;13:evab127. [PMID: 34081101 DOI: 10.1093/gbe/evab127] [Reference Citation Analysis]
45 Huang Z, Yu K, Xiao Y, Wang Y, Xiao D, Wang D. Comparative Genomic Analysis Reveals Potential Pathogenicity and Slow-Growth Characteristics of Genus Brevundimonas and Description of Brevundimonas pishanensis sp. nov. Microbiol Spectr 2022;:e0246821. [PMID: 35416704 DOI: 10.1128/spectrum.02468-21] [Reference Citation Analysis]
46 Baltrus DA. Bacterial dispersal and biogeography as underappreciated influences on phytobiomes. Curr Opin Plant Biol 2020;56:37-46. [PMID: 32278259 DOI: 10.1016/j.pbi.2020.02.010] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
47 Menéndez E, Flores-Félix JD, Ramírez-Bahena MH, Igual JM, García-Fraile P, Peix A, Velázquez E. Genome Analysis of Endobacterium cerealis, a Novel Genus and Species Isolated from Zea mays Roots in North Spain. Microorganisms 2020;8:E939. [PMID: 32580505 DOI: 10.3390/microorganisms8060939] [Cited by in Crossref: 12] [Cited by in F6Publishing: 2] [Article Influence: 6.0] [Reference Citation Analysis]
48 Cooper ZS, Rapp JZ, Shoemaker AMD, Anderson RE, Zhong Z, Deming JW. Evolutionary Divergence of Marinobacter Strains in Cryopeg Brines as Revealed by Pangenomics. Front Microbiol 2022;13:879116. [DOI: 10.3389/fmicb.2022.879116] [Reference Citation Analysis]
49 Guo J, Pang E, Song H, Lin K. A tri-tuple coordinate system derived for fast and accurate analysis of the colored de Bruijn graph-based pangenomes. BMC Bioinformatics 2021;22:282. [PMID: 34044757 DOI: 10.1186/s12859-021-04149-w] [Reference Citation Analysis]
50 Schwarz C, Mathieu J, Laverde Gomez JA, Yu P, Alvarez PJJ. Renaissance for Phage-Based Bacterial Control. Environ Sci Technol 2021. [PMID: 34793127 DOI: 10.1021/acs.est.1c06232] [Reference Citation Analysis]
51 Geng R, Cheng L, Cao C, Liu Z, Liu D, Xiao Z, Wu X, Huang Z, Feng Q, Luo C, Chen Z, Zhang Z, Jiang C, Ren M, Yang A. Comprehensive Analysis Reveals the Genetic and Pathogenic Diversity of Ralstonia solanacearum Species Complex and Benefits Its Taxonomic Classification. Front Microbiol 2022;13:854792. [DOI: 10.3389/fmicb.2022.854792] [Reference Citation Analysis]
52 Colquhoun RM, Hall MB, Lima L, Roberts LW, Malone KM, Hunt M, Letcher B, Hawkey J, George S, Pankhurst L, Iqbal Z. Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs. Genome Biol 2021;22:267. [PMID: 34521456 DOI: 10.1186/s13059-021-02473-1] [Reference Citation Analysis]
53 Jeffery NW, Lehnert SJ, Kess T, Layton KKS, Wringe BF, Stanley RR. Application of Omics Tools in Designing and Monitoring Marine Protected Areas For a Sustainable Blue Economy. Front Genet 2022;13:886494. [DOI: 10.3389/fgene.2022.886494] [Reference Citation Analysis]
54 Cao H, Xu D, Zhang T, Ren Q, Xiang L, Ning C, Zhang Y, Gao R. Comprehensive and functional analyses reveal the genomic diversity and potential toxicity of Microcystis. Harmful Algae 2022;113:102186. [DOI: 10.1016/j.hal.2022.102186] [Reference Citation Analysis]
55 Barragan AC, Weigel D. Plant NLR diversity: the known unknowns of pan-NLRomes. Plant Cell 2021;33:814-31. [PMID: 33793812 DOI: 10.1093/plcell/koaa002] [Cited by in Crossref: 5] [Cited by in F6Publishing: 2] [Article Influence: 5.0] [Reference Citation Analysis]
56 Dimitriu T, Kurilovich E, Łapińska U, Severinov K, Pagliara S, Szczelkun MD, Westra ER. Bacteriostatic antibiotics promote CRISPR-Cas adaptive immunity by enabling increased spacer acquisition. Cell Host Microbe 2021:S1931-3128(21)00520-5. [PMID: 34932986 DOI: 10.1016/j.chom.2021.11.014] [Cited by in Crossref: 5] [Cited by in F6Publishing: 2] [Article Influence: 5.0] [Reference Citation Analysis]
57 Ellegaard KM, Suenami S, Miyazaki R, Engel P. Vast Differences in Strain-Level Diversity in the Gut Microbiota of Two Closely Related Honey Bee Species. Curr Biol 2020;30:2520-2531.e7. [PMID: 32531278 DOI: 10.1016/j.cub.2020.04.070] [Cited by in Crossref: 16] [Cited by in F6Publishing: 12] [Article Influence: 8.0] [Reference Citation Analysis]
58 Chen H, Yin Y, van Dorp L, Shaw LP, Gao H, Acman M, Yuan J, Chen F, Sun S, Wang X, Li S, Zhang Y, Farrer RA, Wang H, Balloux F. Drivers of methicillin-resistant Staphylococcus aureus (MRSA) lineage replacement in China. Genome Med 2021;13:171. [PMID: 34711267 DOI: 10.1186/s13073-021-00992-x] [Reference Citation Analysis]
59 de Korne-Elenbaas J, Bruisten SM, van Dam AP, Maiden MCJ, Harrison OB. The Neisseria gonorrhoeae Accessory Genome and Its Association with the Core Genome and Antimicrobial Resistance. Microbiol Spectr 2022;:e0265421. [PMID: 35604129 DOI: 10.1128/spectrum.02654-21] [Reference Citation Analysis]
60 Chibani CM, Roth O, Liesegang H, Wendling CC. Genomic variation among closely related Vibrio alginolyticus strains is located on mobile genetic elements. BMC Genomics 2020;21:354. [PMID: 32393168 DOI: 10.1186/s12864-020-6735-5] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
61 Carrilero L, Kottara A, Guymer D, Harrison E, Hall JPJ, Brockhurst MA. Positive Selection Inhibits Plasmid Coexistence in Bacterial Genomes. mBio 2021;12:e00558-21. [PMID: 33975933 DOI: 10.1128/mBio.00558-21] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
62 Dunn S, Carrilero L, Brockhurst M, McNally A. Limited and Strain-Specific Transcriptional and Growth Responses to Acquisition of a Multidrug Resistance Plasmid in Genetically Diverse Escherichia coli Lineages. mSystems 2021;6:e00083-21. [PMID: 33906912 DOI: 10.1128/mSystems.00083-21] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
63 Gill JL, Hedge J, Wilson DJ, MacLean RC. Evolutionary Processes Driving the Rise and Fall of Staphylococcus aureus ST239, a Dominant Hybrid Pathogen. mBio 2021;12:e0216821. [PMID: 34903061 DOI: 10.1128/mBio.02168-21] [Reference Citation Analysis]
64 Horesh G, Taylor-Brown A, McGimpsey S, Lassalle F, Corander J, Heinz E, Thomson NR. Different evolutionary trends form the twilight zone of the bacterial pan-genome. Microb Genom 2021;7. [PMID: 34559043 DOI: 10.1099/mgen.0.000670] [Reference Citation Analysis]
65 Baquero F, F Lanza V, Duval M, Coque TM. Ecogenetics of antibiotic resistance in Listeria monocytogenes. Mol Microbiol 2020;113:570-9. [PMID: 32185838 DOI: 10.1111/mmi.14454] [Cited by in Crossref: 9] [Cited by in F6Publishing: 8] [Article Influence: 4.5] [Reference Citation Analysis]
66 Perreau J, Moran NA. Genetic innovations in animal-microbe symbioses. Nat Rev Genet 2021. [PMID: 34389828 DOI: 10.1038/s41576-021-00395-z] [Reference Citation Analysis]
67 Wu H, Wang D, Gao F. Toward a high-quality pan-genome landscape of Bacillus subtilis by removal of confounding strains. Brief Bioinform 2021;22:1951-71. [PMID: 32065216 DOI: 10.1093/bib/bbaa013] [Cited by in Crossref: 11] [Cited by in F6Publishing: 12] [Article Influence: 5.5] [Reference Citation Analysis]
68 Wang Z, Wang K, Bravo A, Soberón M, Cai J, Shu C, Zhang J. Coexistence of cry9 with the vip3A Gene in an Identical Plasmid of Bacillus thuringiensis Indicates Their Synergistic Insecticidal Toxicity. J Agric Food Chem 2020;68:14081-90. [PMID: 33180493 DOI: 10.1021/acs.jafc.0c05304] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
69 Simar SR, Hanson BM, Arias CA. Techniques in bacterial strain typing: past, present, and future. Curr Opin Infect Dis 2021;34:339-45. [PMID: 34039880 DOI: 10.1097/QCO.0000000000000743] [Reference Citation Analysis]
70 Nagies FSP, Brueckner J, Tria FDK, Martin WF. A spectrum of verticality across genes. PLoS Genet 2020;16:e1009200. [PMID: 33137105 DOI: 10.1371/journal.pgen.1009200] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]