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©2014 Baishideng Publishing Group Inc.
World J Gastroenterol. Sep 7, 2014; 20(33): 11770-11779
Published online Sep 7, 2014. doi: 10.3748/wjg.v20.i33.11770
Published online Sep 7, 2014. doi: 10.3748/wjg.v20.i33.11770
Table 1 Sex, age and disease duration of cases of each stage (mean ± SD)
Stage | n | M | F | Age, yr | Disease duration (yr) |
NGM without H. pylori infection | 25 | 14 | 11 | 54.12 ± 8.21 (45-60) | 0.85 ± 0.64 (0.12-1.23) |
NAG with H. pylori infection | 24 | 13 | 11 | 56.44 ± 11.29 (47-65) | 0.85 ± 0.35 (0.37-1.03) |
CAG with H. pylori infection | 25 | 11 | 14 | 55.90 ± 7.80 (45-66) | 0.73 ± 0.24 (0.13-0.90) |
IM with H. pylori infection | 28 | 12 | 16 | 52.16 ± 8.59 (48-68) | 0.90 ± 0.65 (0.47-1.04) |
DYS with H. pylori infection | 24 | 12 | 12 | 54.05 ± 7.36 (48-69) | 0.73 ± 0.57 (0.56-1.15) |
GC with H. pylori infection | 30 | 17 | 13 | 55.43 ± 10.33 (46-73) | 0.60 ± 0.46 (0.10-1.04) |
Table 2 Cx32 and Cx43 primer sequences, amplified fragment size and annealing temperature
Method | Gene | Primer sequence (5’→3’) | Amplified fragment size (bp) | Annealing temperature (°C) | ||
Real-time RT-PCR | Cx32 | F: | ATGAACTGGACAGGTTTGTAC | 302 | 56 | |
R: | ATGTGTTGCTGGTGCAGCCA | |||||
Cx43 | F: | TGCAGCAGTCTGCCTTTCGTTG | 219 | 56 | ||
R: | CCATCAGTTTGGGCAACCTTG | |||||
β-actin | F: | TGGACTTCGCAGCACAGCAGATGG | 289 | 56 | ||
R: | ATCTCCTTCTGCATCCTGTCG | |||||
MSP | Cx32 | M | F: | GGGGCGGGTGCGGCGAT | 245 | 64 |
R: | CTCCGCGCCTACGTCCC | |||||
U | F: | GGGGTGGGTGTGGTGAT | 245 | 64 | ||
R: | CTCCACACCTACATCCCAA | |||||
Cx43 | M | F: | AAATTGTAATATTTGGGTTTCAGCGC | 156 | 58 | |
R: | AATAACGCCATCTCTACTCACCG | |||||
U | F: | TTTTAAAATTGTAATATTTGGGTTTCAGTGT | 161 | 56 | ||
R: | AATAACACCATCTCTACTCACCACA | |||||
BSP | Cx32 | F: | GGTTATTTTTTTGGTGGGGTTATG | 313 | 58 | |
R: | ACCCAAACAAATCCCCTATAATCTC | |||||
Cx43 | F: | TGTTTTTTAAAATTGTAATATTTGGGTTTA | 377 | 56 | ||
R: | AAAAACAAACTCATCTAACCTTCCTATTC | |||||
MassArray | Cx32 | F: | CAGTTT CAGCAGTTTTTGGGTTTTTTGG | 484 | 60 | |
R: | TAACTCCCTATCCCCTAACTCCTTA | |||||
Cx43 | F: | ATGTTTTTGCAGGTTGGATCAGGAAAT | 447 | 60 | ||
R: | ACCAACAAATAAAAACAAAATTATTCC |
Table 3 Cx32 and Cx43 CpG loci detected by bisulfite polymerase chain reaction sequencing
Cx32 | CpG | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
bp | 28 | 34 | 37 | 45 | 49 | 83 | 86 | 120 | 132 | 155 | 227 | 231 | 247 | 253 | 255 | |
○ | ○ | ○ | ○ | ● | ● | ● | ● | ● | ● | ● | ● | ● | ● | ● | ||
Cx43 | CpG | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |||
bp | 32 | 34 | 37 | 44 | 71 | 127 | 134 | 143 | 159 | 190 | 198 | 280 | ||||
○ | ○ | ○ | ○ | ● | ● | ● | ● | ● | ● | ● | ● |
Table 4 Cx32 and Cx43 promoter methylation status at different gastric carcinogenesis stages with Helicobacter pylori infection by bisulfite polymerase chain reaction sequencing method
n | Cx32 (%) | Cx43 (%) | |
NGM without H. pylori infection | 7 | 60.1 ± 5.9 | 75.5 ± 4.3 |
NAG with H. pylori infection | 6 | 67.3 ± 4.9 | 82.9 ± 6.3 |
CAG with H. pylori infection | 7 | 74.5 ± 7.5a | 87.1 ± 5.4a |
IM with H. pylori infection | 7 | 84.2 ± 6.8ace | 90.5 ± 9.3ac |
DYS with H. pylori infection | 6 | 82.3 ± 6.0ac | 91.6 ± 8.3ac |
GC with H. pylori infection | 9 | 85.3 ± 9.7ace | 92.0 ± 7.1ac |
Table 5 Methylation levels (%) of Cx32 and Cx43 CpG islands at gastric different stages with Helicobacter pylori infection detected by MassArray method
Cx32 (9 loci) | Cx43 (8 loci) | |
NGM without H. pylori infection | 55.0 ± 14.9 | 77.9 ± 16.8 |
NAG with H. pylori infection | 61.2 ± 17.9 | 86.0 ± 12.5 |
CAG with H. pylori infection | 69.9 ± 16.2 | 88.6 ± 9.9 |
IM with H. pylori infection | 72.4 ± 19.2a | 89.1 ± 9.6 |
DYS with H. pylori infection | 72.6 ± 19.2a | 90.0 ± 9.3a |
GC with H. pylori infection | 76.0 ± 20.1a | 91.6 ± 8.2a |
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Citation: Wang Y, Huang LH, Xu CX, Xiao J, Zhou L, Cao D, Liu XM, Qi Y.
Connexin 32 and43 promoter methylation inHelicobacter pylori -associated gastric tumorigenesis. World J Gastroenterol 2014; 20(33): 11770-11779 - URL: https://www.wjgnet.com/1007-9327/full/v20/i33/11770.htm
- DOI: https://dx.doi.org/10.3748/wjg.v20.i33.11770