Original Article
Copyright ©2012 Baishideng Publishing Group Co.
World J Gastroenterol. Jun 7, 2012; 18(21): 2619-2629
Published online Jun 7, 2012. doi: 10.3748/wjg.v18.i21.2619
Table 1 Primers used for real-time polymerase chain reaction amplification of 16S rRNA gene
PCR assayPrimersPrimers Sequences 5’→3’Accession number (NCBI)Linear regression curves with coefficient of correlationSources of reference
Total BacteriaUnivFTCCTACGGGAGGCAGCAGTG-Y = -2.941 x + 36.580Watanabe et al[21], 2001
UnivRTTACCGCGGCTGCTGGCACG = 0.9997Nadkarni et al[22], 2002
BacteroidetesBacFCCTWCGATGGATAGGGGTT-Y = -2.908 x + 35.839Firmesse et al[23], 2008
BactRTCCCCAGGTGGAATACTTAACG = 0.9995
EnterobacteriaEntFCATTGACGTTACCCGCAGAAGAAAX110239/AX109631Y = -3.192 x + 36.762This study
EntRCGCTTGCACCCTCCGTATTAAF293850/U26176 = 0.9747
FirmicutesFirmFACCCGCGTCTGATTAGCTAGTTM59090/L34627Y = -3.298 x + 39.136This study
FirmRCCTCTCAGGCCGGCTACTGY10584/FJ345661 = 0.9924