Deka M, Bose M, Baruah B, Bose PD, Medhi S, Bose S, Saikia A, Kar P. Role of CYP2E1 gene polymorphisms association with hepatitis risk in Northeast India. World J Gastroenterol 2010; 16(38): 4800-4808 [PMID: 20939108 DOI: 10.3748/wjg.v16.i38.4800]
Corresponding Author of This Article
Dr. Manab Deka, Reader, Department of Biotechnology, Gauhati University, Guwahati, Assam-781014, India. d_bhaity@rediffmail.com
Article-Type of This Article
Original Article
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World J Gastroenterol. Oct 14, 2010; 16(38): 4800-4808 Published online Oct 14, 2010. doi: 10.3748/wjg.v16.i38.4800
Table 1 Demographical, biochemical and serological profiles of liver disease patients
Parameter
HAV
HBV
HCV
HEV
HAV+HBV
Alcoholic
Cryptogenic
n
38
22
4
10
2
12
16
Male:female
22:16
16:6
2:2
6:4
2:0
11:1
12:4
Mean age (yr)
23 ± 16
40 ± 28
45 ± 8
38 ± 15
55
44 ± 5
43 ± 21
Mean SGOT
241 ± 168
333 ± 108
86 ± 46
778 ± 336
40 ± 5
323 ± 212
109 ± 66
Mean SGPT
265 ± 198
243 ± 148
73 ± 28
513 ± 366
39 ± 8
283 ± 155
85 ± 43
Table 2 Distribution of Cytochrome P450 2E1 genotype in hepatitis cases compared to controls
Number of individuals (% of group)
Less common allele frequency
χ2value (P value)
OR (95% CI)
Homozygous-more common allele
Heterozygous
Homozygous-less common allele
RsaI polymorphism
c1/c1
c1/c2
c2/c2
Controls (n = 124)
122 (98.39)
2 (1.61)
0
1.61
ref.
Hepatitis (n = 104)
94 (90.39)
10 (9.71)
0
9.61
0.007
6.489 (1.389-30.326)
DraI polymorphism
DD
DC
CC
Controls (n = 124)
122 (98.39)
2 (1.61)
0
1.61
ref.
Hepatitis (n = 104)
96 (92.31)
4 (3.84)
4 (3.84)
7.69
0.026
5.083 (1.055-24.492)
Table 3 Detail distribution of Cytochrome P450 2E1 genotypes in different underlying etiology of hepatitis
Number of individuals (% of group)
Less common allelefrequency
χ2value (P value)
OR (95% CI)
Homozygous-more common allele
Heterozygous
Homozygous-less common allele
RsaI polymorphism
c1/c1
c1/c2
c2/c2
Controls (n = 124)
122 (98.4)
2 (1.6)
0
1.6
ref.
HAV (n = 38)
36 (94.7)
2 (5.3)
0
5.3
0.160
5.229 (0.840-32.537)
HBV (n = 22)
20 (90.9)
2 (9.1)
0
9.1
0.080
2.905 (0.252-33.484)
HCV (n = 4)
4 (100)
0 (0)
0
0
0.798
0.968 (0.938-1.0)
HEV (n = 10)
10 (100)
0 (0)
0
0
0.686
0.924 (0.880-0.971)
HAV + HBV (n = 2)
2 (100)
0 (0)
0
0
0.856
0.984 (0.962-1.006)
Alcoholic (n = 12)
8 (66.66)
4 (33.33)
0
33.33
< 0.0001
30.500 (4.835-192.418)
Cryptogenic (n = 16)
14 (87.5)
2 (12.5)
0
12.5
0.014
8.714 (1.137-66.784)
DraI polymorphism
DD
DC
CC
Controls (n = 124)
122 (98.4)
2 (1.6)
0
1.6
ref.
HAV (n = 38)
34 (89.5)
2 (5.25)
2 (5.25)
10.5
0.006
7.176 (1.260-40.863)
HBV (n = 22)
22 (100)
0
0
0
0.514
0.847 (0.790-0.908)
HCV (n = 4)
4 (100)
0
0
0
0.798
0.968 (0.938-1.0)
HEV (n = 10)
10 (100)
0
0
0
0.164
0.924 (0.880-0.971)
HAV + HBV (n = 2)
2 (100)
0
0
0
0.856
0.984 (0.962-1.006)
Alcoholic (n = 12)
10 (83.3)
2 (16.7)
0
16.7
0.003
12.220 (1.550-96.035)
Cryptogenic (n = 16)
14 (87.5)
0
2 (12.5)
12.5
0.014
8.714 (1.137-66.784)
Table 4 Nitrite estimation in food products routinely consumed in Northeast India
Sl. No.
Name of foodstuff
Amount of nitrite present (μg/mL)
1
Raw bamboo shoot
0.043
2
Fermented bamboo shoot
0.379
3
Raw fish (Puntius sarana)
0.900
4
Fermented fish
0.855
5
Dried fish
0.915
6
Raw radish leaf
0.050
7
Gundruk (fermented radish leaf)
2.150
8
Mustard seeds
10.500
9
Kharoli (fermented mustard)
10.800
10
Pork
0.650
11
Fermented pork
0.950
12
Beetle nut (wet, Tamul)
0.362
13
Beetle nut (dry, Supari)
0.612
14
Tea
0.300
15
Betel leaf (Pan)
2.400
Citation: Deka M, Bose M, Baruah B, Bose PD, Medhi S, Bose S, Saikia A, Kar P. Role of CYP2E1 gene polymorphisms association with hepatitis risk in Northeast India. World J Gastroenterol 2010; 16(38): 4800-4808