Huang Q, Ding W, Wei MX. Comparative analysis of common CFTR polymorphisms poly-T, TG-repeats and M470V in a healthy Chinese population. World J Gastroenterol 2008; 14(12): 1925-1930 [PMID: 18350634 DOI: 10.3748/wjg.14.1925]
Corresponding Author of This Article
Dr. Mu-Xin Wei, Department of Traditional Chinese Medicine, the First Affiliated Hospital of Nanjing Medical University, 300 Guangzhou Road, Nanjing 210029, Jiangsu Province, China. weimuxin@njmu.edu.cn
Article-Type of This Article
Rapid Communication
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World J Gastroenterol. Mar 28, 2008; 14(12): 1925-1930 Published online Mar 28, 2008. doi: 10.3748/wjg.14.1925
Table 1 Allele frequency of poly-T tract
Number (n)
Number (frequencies) of poly-T tract
T5
T6
T7
T9
2n = 264
10 (0.0379)
4 (0.0152)
247 (0.9356)
3 (0.0114)
Table 2 Allele frequency of TG-repeat polymorphisms
Number (2n)
Number (frequencies) of TG-repeats
TG10
TG11
TG12
TG13
264
3 (0.0114)
151 (0.572)
108 (0.4091)
2 (0.0076)
TG-repeat number (frequencies) in individuals with alleles
11/11
11/12
12/12
11/13
10/12
132
61 (0.4621)
28 (0.2121)
39 (0.2955)
2 (0.0152)
2 (0.0152)
Table 3 Genotypes and allele frequencies at M470V polymorphic site
Number (2n)
Number (frequencies) of individuals with genotypes
Number (frequencies) of individuals with alleles
MM
MV
VV
M
V
264
28 (0.2121)
60 (0.4545)
44 (0.3333)
116 (0.4394)
148 (0.5606)
Table 4 Linkage of poly-T, TG-repeats and M470V
Linkage haplotypes
2n (frequencies) (2n = 264)
T7-TG11-V470
125 (0.4735)
T7-TG12-M470
77 (0.2917)
T7-TG11-M470
26 (0.0985)
T7-TG12-V470
18 (0.0682)
T5-TG12-M470
8 (0.0303)
T5-TG12-V470
2 (0.0076)
T7-TG13-M470
2 (0.0076)
T9-TG10-M470
1 (0.0038)
T9-TG10-V470
1 (0.0038)
T6-TG12-M470
2 (0.0076)
T6-TG12-V470
1 (0.0038)
T6-TG11-V470
1 (0.0038)
Table 5 Frequencies of TG-repeats and M470V haplotypes
M470V
(TG) n
n/frequencies (n = 132)
V/V
11/11
35 (0.2625)
M/M
12/12
27 (0.2045)
M/V
11/11
26 (0.1970)
M/V
11/12
20 (0.1515)
M/V
12/12
11 (0.0833)
V/V
11/12
8 (0.0606)
M/V
11/13
2 (0.0152)
V/V
12/12
1 (0.0076)
M/M
10/12
1 (0.0076)
M/V
10/12
1 (0.0076)
Citation: Huang Q, Ding W, Wei MX. Comparative analysis of common CFTR polymorphisms poly-T, TG-repeats and M470V in a healthy Chinese population. World J Gastroenterol 2008; 14(12): 1925-1930