Rapid Communication
Copyright ©2008 The WJG Press and Baishideng.
World J Gastroenterol. Mar 14, 2008; 14(10): 1570-1574
Published online Mar 14, 2008. doi: 10.3748/wjg.14.1570
Table 1 Primers used for AXIN1, AXIN2 and CTNNB1 gene amplification
ExonSense primerAntisense primer
AXIN1
exon1A5’-TGGTCGTGTTTCATGGACCC-3’5’-AATGCAGTGACTCAGCCCACT-3’
exon1B5’-GGATCTGGACCTGGGGTATG-3’5’-ATAGTGGCCTGGATTTCGGT-3’
exon1C5’-ATCATGAAGCAGCTGATCG-3’5’-GAGGTGAGTACAGAAAGTGGAC-3’
exon25’-CTGTTGGCAGGCTGTCACT-3’5’-GTCCGTGAGGGACTGGGTA-3’
exon35’-CTGGCCCTCCTGCTCCTCT-3’5’-AGGACGATGGGCTGAGGAC-3’
exon45’-TTTAGCCTGTGACCTTTCAAC-3’5’-ATCCCGGCGGCAAGAA-3’
exon5A5’-AGCTGGTGCTGAGAGGTGATG-3’5’-CCCTGACTTGGGTACGTGCTT-3’
exon5B5’-TGGGCACGTGGCCAAGAT-3’5’-AAGCCCCCTCCTCACTGACAG-3’
exon65’-CACCGGAGGCCAGGGCGACT-3’5’-TGGCAAAGCAGGCCCCACGA-3’
exon75’-CCAGGGTGTCGGCCACAGTC-3’5’-CCCCAGGAGTGGTGCTGTGGT-3’
exon85’-GCGCAGCAGCATTGGTCGAG-3’5’-GGGCAGGACCGGGAGGACC-3’
exon95’-AGTCCAAAACCAGGTACCAC-3’5’-AAACCCTCTTTTTCATACCG-3’
exon105’-CACGCCGTCCCCTGCCAC-3’5’-GACACCCGTGCCCGCCAA-3’
AXIN2
exon75’-TCCTTGTTTTGCCCAAAGC-3’5’-GGTCAGGGGAGGCATCGCAG-3’
CTNNB1
exon3
P3-45’-GATTTGATGGAGTTGGACATGG-3’5’-TGTTCTTGAGTGAAGGACTGAG-3’
Table 2 The profile of AXIN1 polymorphisms
ExonNucleotide changesAmino acid1Frequency (%)
1334 C→TGly74Gly4.3
874 C→TAsp254Asp42.8
51396 G→ASer428Ser10.0
1690 C→TAsp526Asp2.9
61942 T→GAla610Ala12.9