Brief Reports
Copyright ©2005 Baishideng Publishing Group Inc.
World J Gastroenterol. May 14, 2005; 11(18): 2811-2816
Published online May 14, 2005. doi: 10.3748/wjg.v11.i18.2811
Table 1 Differentially expressed known genes in HCC and normal liver.
Clone IDGB-ACCTypeCodeIdentityRemarks
192Z11793Known-relatedRedoxSelenoproteinRelated to redox
273AF132609Known-relatedDRHistone deacetylase 6Related to DNA replication and transcription
568Y07846Known-relatedTSGAR-22 meningioma deleted gene, 22q12Deleted in meningioma
671X80199Known-relatedOMLN51Possibly related to breast cancer progression (17q11-q21.3)
1483U50330Known-relatedPPCP-2Procollagen C-proteinase
2648AJ223951Known-relatedCCCDK2CDK2
2803E12644Known-relatedCCQ6 (quiescin)Cell proliferation inhibitor
2820U89867Known-relatedSTNuclear matrix protein 55 (nmt55),Possibly related to ER negative phenotype and
related to breast cancer metastasistumor progression metastases in breast cancer
2939M25915Known-relatedPComplement cytolysis inhibitor, CLI.Complement cytolysis inhibitor
3120X86691Known-relatedTAHelicase (presumed), Mi-2 protein (218 ku), involved in transcriptional activation
3373U60068Known-unrelatedM/SFibronectinMatrix protein fibronectin
3423AF027740Known-relatedRedoxTransferase, microsomal glutathione S-transferase 1-like 1 (MGST1L1)Related to redox
4367AF064770Known-relatedSTKinase, DAG (diacylglycerol) kinase alphaKinase for diacylglycerol
6655AF069987Known-relatedTSNitrilase 1 (NIT1)A putative tumor suppressor, with diadenosine triphosphate (A-ppp-A) hydrolase activity
7072X57352Known-relatedIInterferon-inducible gene family (1-8 U gene)
8343X13905Known-relatedSTRas-related rab1B protein
9039U41767Known-relatedPMetargidinA membrane-anchored metalloprotease-disintegrin protein with an RGD integrin binding sequence
Table 2 Differentially expressed novel genes in HCC and normal liver.
Clone IDGB-ACCTypeIdentity
6-Novel-
50AC007078Novel-only DNAClone NH0340A14
432-Novel-
775G42524Novel-only DNASTS genomic (sequence tagged site)
894-Novel-
1008G27158Novel-only DNASTS SHGC-31700
1485Z68162Novel-only DNACosmid L145E5
1511AB002307Novel-unknown-function mRNA,KIAA0309
1863AL110272Novel-unknown-functionDKFZp564C0716
2202AF086469Novel-unknown-functionFull-length insert cDNA clone ZD87A06
3227-Novel-
3429AB020685Novel-unknown-function mRNA,KIAA0878
4189-Novel-
6068-Novel-
7478AF052114Novel-only DNAClone 23887
7518-Novel-
9427AB002339Novel-unknown-function mRNA,KIAA0341
12723-Novel-
13734AF030453Novel-only DNAChromosome 7q22, 7q22-q31.1
14214-Novel-
14733-Novel-