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For: Gallagher ME, Brooke CB, Ke R, Koelle K. Causes and Consequences of Spatial Within-Host Viral Spread. Viruses 2018;10:E627. [PMID: 30428545 DOI: 10.3390/v10110627] [Cited by in Crossref: 34] [Cited by in F6Publishing: 21] [Article Influence: 8.5] [Reference Citation Analysis]
Number Citing Articles
1 Świętoń E, Tarasiuk K, Olszewska-Tomczyk M, Iwan E, Śmietanka K. A Turkey-origin H9N2 Avian Influenza Virus Shows Low Pathogenicity but Different Within-Host Diversity in Experimentally Infected Turkeys, Quail and Ducks. Viruses 2020;12:E319. [PMID: 32188100 DOI: 10.3390/v12030319] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
2 Koelle K, Farrell AP, Brooke CB, Ke R. Within-host infectious disease models accommodating cellular coinfection, with an application to influenza. Virus Evol 2019;5:vez018. [PMID: 31304043 DOI: 10.1093/ve/vez018] [Cited by in Crossref: 13] [Cited by in F6Publishing: 12] [Article Influence: 4.3] [Reference Citation Analysis]
3 Schreiber SJ, Ke R, Loverdo C, Park M, Ahsan P, Lloyd-smith JO. Cross-scale dynamics and the evolutionary emergence of infectious diseases. Virus Evolution 2021;7:veaa105. [DOI: 10.1093/ve/veaa105] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
4 González-Parra G, Dobrovolny HM. The rate of viral transfer between upper and lower respiratory tracts determines RSV illness duration. J Math Biol 2019;79:467-83. [PMID: 31011792 DOI: 10.1007/s00285-019-01364-1] [Cited by in Crossref: 7] [Cited by in F6Publishing: 6] [Article Influence: 2.3] [Reference Citation Analysis]
5 Zhu H, Allman BE, Koelle K. Fitness Estimation for Viral Variants in the Context of Cellular Coinfection. Viruses 2021;13:1216. [PMID: 34201862 DOI: 10.3390/v13071216] [Reference Citation Analysis]
6 Baabdulla AA, Now H, Park JA, Kim WJ, Jung S, Yoo JY, Hillen T. Homogenization of a reaction diffusion equation can explain influenza A virus load data. J Theor Biol 2021;527:110816. [PMID: 34161792 DOI: 10.1016/j.jtbi.2021.110816] [Reference Citation Analysis]
7 [DOI: 10.1101/2020.09.25.20201772] [Cited by in Crossref: 20] [Cited by in F6Publishing: 2] [Reference Citation Analysis]
8 Ganti K, Han J, Manicassamy B, Lowen AC. Rab11a mediates cell-cell spread and reassortment of influenza A virus genomes via tunneling nanotubes. PLoS Pathog 2021;17:e1009321. [PMID: 34473799 DOI: 10.1371/journal.ppat.1009321] [Reference Citation Analysis]
9 Michael Lavigne G, Russell H, Sherry B, Ke R. Autocrine and paracrine interferon signalling as 'ring vaccination' and 'contact tracing' strategies to suppress virus infection in a host. Proc Biol Sci 2021;288:20203002. [PMID: 33622135 DOI: 10.1098/rspb.2020.3002] [Cited by in Crossref: 1] [Cited by in F6Publishing: 4] [Article Influence: 1.0] [Reference Citation Analysis]
10 Bull JJ, Nuismer SL, Antia R. Recombinant vector vaccine evolution. PLoS Comput Biol 2019;15:e1006857. [PMID: 31323032 DOI: 10.1371/journal.pcbi.1006857] [Cited by in Crossref: 17] [Cited by in F6Publishing: 14] [Article Influence: 5.7] [Reference Citation Analysis]
11 Lakdawala SS, Brooke CB. What's New with Flu? An Overview. Viruses 2019;11:E433. [PMID: 31083357 DOI: 10.3390/v11050433] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.3] [Reference Citation Analysis]
12 Carruthers J, Lythe G, López-García M, Gillard J, Laws TR, Lukaszewski R, Molina-París C. Stochastic dynamics of Francisella tularensis infection and replication. PLoS Comput Biol 2020;16:e1007752. [PMID: 32479491 DOI: 10.1371/journal.pcbi.1007752] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
13 Reinharz V, Churkin A, Lewkiewicz S, Dahari H, Barash D. A Parameter Estimation Method for Multiscale Models of Hepatitis C Virus Dynamics. Bull Math Biol 2019;81:3675-721. [PMID: 31338739 DOI: 10.1007/s11538-019-00644-7] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 0.7] [Reference Citation Analysis]
14 Myers MA, Smith AP, Lane LC, Moquin DJ, Aogo R, Woolard S, Thomas P, Vogel P, Smith AM. Dynamically linking influenza virus infection kinetics, lung injury, inflammation, and disease severity. Elife 2021;10:e68864. [PMID: 34282728 DOI: 10.7554/eLife.68864] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
15 Sanjuán R, Illingworth CJR, Geoghegan JL, Iranzo J, Zwart MP, Ciota AT, Moratorio G, Gago-zachert S, Duffy S, Vijaykrishna D. Five Challenges in the Field of Viral Diversity and Evolution. Front Virol 2021;1:684949. [DOI: 10.3389/fviro.2021.684949] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 3.0] [Reference Citation Analysis]
16 Martin BE, Harris JD, Sun J, Koelle K, Brooke CB. Cellular co-infection can modulate the efficiency of influenza A virus production and shape the interferon response. PLoS Pathog 2020;16:e1008974. [PMID: 33064776 DOI: 10.1371/journal.ppat.1008974] [Cited by in Crossref: 5] [Cited by in F6Publishing: 3] [Article Influence: 2.5] [Reference Citation Analysis]
17 Perelson AS, Ke R. Mechanistic Modeling of SARS-CoV-2 and Other Infectious Diseases and the Effects of Therapeutics. Clin Pharmacol Ther 2021;109:829-40. [PMID: 33410134 DOI: 10.1002/cpt.2160] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 7.0] [Reference Citation Analysis]
18 Cheng CC, Yang CF, Lo YP, Chiang YH, Sofiyatun E, Wang LC, Chen WJ. Cell-to-Cell Spread of Dengue Viral RNA in Mosquito Cells. Biomed Res Int 2020;2020:2452409. [PMID: 32685452 DOI: 10.1155/2020/2452409] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
19 Paulose J, Hallatschek O. The impact of long-range dispersal on gene surfing. Proc Natl Acad Sci U S A 2020;117:7584-93. [PMID: 32198207 DOI: 10.1073/pnas.1919485117] [Cited by in Crossref: 10] [Cited by in F6Publishing: 4] [Article Influence: 5.0] [Reference Citation Analysis]
20 Leeks A, West SA, Ghoul M. The evolution of cheating in viruses. Nat Commun 2021;12:6928. [PMID: 34836945 DOI: 10.1038/s41467-021-27293-6] [Reference Citation Analysis]
21 Quirouette C, Younis NP, Reddy MB, Beauchemin CAA. A mathematical model describing the localization and spread of influenza A virus infection within the human respiratory tract. PLoS Comput Biol 2020;16:e1007705. [PMID: 32282797 DOI: 10.1371/journal.pcbi.1007705] [Cited by in Crossref: 8] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
22 Huang Y, Dai H, Ke R. Principles of Effective and Robust Innate Immune Response to Viral Infections: A Multiplex Network Analysis. Front Immunol 2019;10:1736. [PMID: 31396233 DOI: 10.3389/fimmu.2019.01736] [Cited by in Crossref: 17] [Cited by in F6Publishing: 11] [Article Influence: 5.7] [Reference Citation Analysis]
23 Fain BG, Dobrovolny HM. GPU acceleration and data fitting: Agent-based models of viral infections can now be parameterized in hours. Journal of Computational Science 2022. [DOI: 10.1016/j.jocs.2022.101662] [Reference Citation Analysis]
24 Miller J, Burch-smith TM, Ganusov VV. Mathematical Modeling Suggests Cooperation of Plant-Infecting Viruses. Viruses 2022;14:741. [DOI: 10.3390/v14040741] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
25 Jacobs NT, Onuoha NO, Antia A, Steel J, Antia R, Lowen AC. Incomplete influenza A virus genomes occur frequently but are readily complemented during localized viral spread. Nat Commun 2019;10:3526. [PMID: 31387995 DOI: 10.1038/s41467-019-11428-x] [Cited by in Crossref: 30] [Cited by in F6Publishing: 22] [Article Influence: 10.0] [Reference Citation Analysis]
26 Sego TJ, Aponte-Serrano JO, Gianlupi JF, Glazier JA. Generation of multicellular spatiotemporal models of population dynamics from ordinary differential equations, with applications in viral infection. BMC Biol 2021;19:196. [PMID: 34496857 DOI: 10.1186/s12915-021-01115-z] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]