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For: Mosca A, Leclerc M, Hugot JP. Gut Microbiota Diversity and Human Diseases: Should We Reintroduce Key Predators in Our Ecosystem? Front Microbiol 2016;7:455. [PMID: 27065999 DOI: 10.3389/fmicb.2016.00455] [Cited by in Crossref: 189] [Cited by in F6Publishing: 179] [Article Influence: 31.5] [Reference Citation Analysis]
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6 Parodi B, Kerlero de Rosbo N. The Gut-Brain Axis in Multiple Sclerosis. Is Its Dysfunction a Pathological Trigger or a Consequence of the Disease? Front Immunol 2021;12:718220. [PMID: 34621267 DOI: 10.3389/fimmu.2021.718220] [Reference Citation Analysis]
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8 Laue HE, Korrick SA, Baker ER, Karagas MR, Madan JC. Prospective associations of the infant gut microbiome and microbial function with social behaviors related to autism at age 3 years. Sci Rep 2020;10:15515. [PMID: 32968156 DOI: 10.1038/s41598-020-72386-9] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
9 Sfanos KS, Markowski MC, Peiffer LB, Ernst SE, White JR, Pienta KJ, Antonarakis ES, Ross AE. Compositional differences in gastrointestinal microbiota in prostate cancer patients treated with androgen axis-targeted therapies. Prostate Cancer Prostatic Dis 2018;21:539-48. [PMID: 29988102 DOI: 10.1038/s41391-018-0061-x] [Cited by in Crossref: 46] [Cited by in F6Publishing: 43] [Article Influence: 11.5] [Reference Citation Analysis]
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11 Bonfiglio G, Neroni B, Radocchia G, Pompilio A, Mura F, Trancassini M, Di Bonaventura G, Pantanella F, Schippa S. Growth Control of Adherent-Invasive Escherichia coli (AIEC) by the Predator Bacteria Bdellovibrio bacteriovorus: A New Therapeutic Approach for Crohn's Disease Patients. Microorganisms 2019;8:E17. [PMID: 31861852 DOI: 10.3390/microorganisms8010017] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 1.3] [Reference Citation Analysis]
12 Sala C, Giampieri E, Vitali S, Garagnani P, Remondini D, Bazzani A, Franceschi C, Castellani GC. Gut microbiota ecology: Biodiversity estimated from hybrid neutral-niche model increases with health status and aging. PLoS One 2020;15:e0237207. [PMID: 33125392 DOI: 10.1371/journal.pone.0237207] [Cited by in Crossref: 1] [Article Influence: 0.5] [Reference Citation Analysis]
13 Hitschfeld M, Tovar E, Gupta S, Bik EM, Palmer C, Hoaglin MC, Almonacid DE, Richman J, Apte ZS. The role of a sequencing-based clinical intestinal screening test in patients at high-risk for Clostridium difficile and other pathogens: a case report. J Med Case Rep 2019;13:9. [PMID: 30642394 DOI: 10.1186/s13256-018-1919-1] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 0.7] [Reference Citation Analysis]
14 Martínez-Cuesta MC, Del Campo R, Garriga-García M, Peláez C, Requena T. Taxonomic Characterization and Short-Chain Fatty Acids Production of the Obese Microbiota. Front Cell Infect Microbiol 2021;11:598093. [PMID: 34222034 DOI: 10.3389/fcimb.2021.598093] [Reference Citation Analysis]
15 Marzorati M, Van den Abbeele P, Bubeck S, Bayne T, Krishnan K, Young A. Treatment with a spore-based probiotic containing five strains of Bacillus induced changes in the metabolic activity and community composition of the gut microbiota in a SHIME® model of the human gastrointestinal system. Food Res Int 2021;149:110676. [PMID: 34600678 DOI: 10.1016/j.foodres.2021.110676] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
16 Xiong F, Qin L, Hao Y, Zhao D, Li W, Zou H, Li M, Wu S, Wang G. Gut microbiota modulation and immunity response induced by Citrobacter freundii strain GC01 in grass carp (Ctenopharyngodon idellus). Aquaculture 2020;521:735015. [DOI: 10.1016/j.aquaculture.2020.735015] [Cited by in Crossref: 4] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
17 Zinno P, Motta V, Guantario B, Natella F, Roselli M, Bello C, Comitato R, Carminati D, Tidona F, Meucci A, Aiello P, Perozzi G, Virgili F, Trevisi P, Canali R, Devirgiliis C. Supplementation with dairy matrices impacts on homocysteine levels and gut microbiota composition of hyperhomocysteinemic mice. Eur J Nutr 2020;59:345-58. [DOI: 10.1007/s00394-019-01911-y] [Cited by in Crossref: 8] [Cited by in F6Publishing: 5] [Article Influence: 2.7] [Reference Citation Analysis]
18 Xie Z, Wang Y, Yang G, Han J, Zhu L, Li L, Zhang S. The role of the Hippo pathway in the pathogenesis of inflammatory bowel disease. Cell Death Dis 2021;12:79. [PMID: 33436549 DOI: 10.1038/s41419-021-03395-3] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
19 Graf BL, Zhang L, Corradini MG, Kuhn P, Newman SS, Salbaum JM, Raskin I. Physicochemical differences between malanga (Xanthosoma sagittifolium) and potato (Solanum tuberosum) tubers are associated with differential effects on the gut microbiome. J Funct Foods 2018;45:268-76. [PMID: 30416540 DOI: 10.1016/j.jff.2018.04.032] [Cited by in Crossref: 8] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
20 Wastyk HC, Fragiadakis GK, Perelman D, Dahan D, Merrill BD, Yu FB, Topf M, Gonzalez CG, Van Treuren W, Han S, Robinson JL, Elias JE, Sonnenburg ED, Gardner CD, Sonnenburg JL. Gut-microbiota-targeted diets modulate human immune status. Cell 2021;184:4137-4153.e14. [PMID: 34256014 DOI: 10.1016/j.cell.2021.06.019] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
21 Krause JL, Schäpe SS, Schattenberg F, Müller S, Ackermann G, Rolle-Kampczyk UE, Jehmlich N, Pierzchalski A, von Bergen M, Herberth G. The Activation of Mucosal-Associated Invariant T (MAIT) Cells Is Affected by Microbial Diversity and Riboflavin Utilization in vitro. Front Microbiol 2020;11:755. [PMID: 32390989 DOI: 10.3389/fmicb.2020.00755] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 3.0] [Reference Citation Analysis]
22 Ni J, Wu GD, Albenberg L, Tomov VT. Gut microbiota and IBD: causation or correlation? Nat Rev Gastroenterol Hepatol. 2017;14:573-584. [PMID: 28743984 DOI: 10.1038/nrgastro.2017.88] [Cited by in Crossref: 451] [Cited by in F6Publishing: 405] [Article Influence: 90.2] [Reference Citation Analysis]
23 Patangia DV, Anthony Ryan C, Dempsey E, Paul Ross R, Stanton C. Impact of antibiotics on the human microbiome and consequences for host health. MicrobiologyOpen 2022;11. [DOI: 10.1002/mbo3.1260] [Reference Citation Analysis]
24 Metwally AA, Ascoli C, Turturice B, Rani A, Ranjan R, Chen Y, Schott C, Faro A, Ferkol TW, Finn PW, Perkins DL. Pediatric lung transplantation: Dynamics of the microbiome and bronchiolitis obliterans in cystic fibrosis. J Heart Lung Transplant 2020;39:824-34. [PMID: 32580896 DOI: 10.1016/j.healun.2020.04.016] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
25 Dobranowski PA, Tang C, Sauvé JP, Menzies SC, Sly LM. Compositional changes to the ileal microbiome precede the onset of spontaneous ileitis in SHIP deficient mice. Gut Microbes 2019;10:578-98. [PMID: 30760087 DOI: 10.1080/19490976.2018.1560767] [Cited by in Crossref: 17] [Cited by in F6Publishing: 15] [Article Influence: 5.7] [Reference Citation Analysis]
26 Sen T, Cawthon CR, Ihde BT, Hajnal A, DiLorenzo PM, de La Serre CB, Czaja K. Diet-driven microbiota dysbiosis is associated with vagal remodeling and obesity. Physiol Behav 2017;173:305-17. [PMID: 28249783 DOI: 10.1016/j.physbeh.2017.02.027] [Cited by in Crossref: 98] [Cited by in F6Publishing: 91] [Article Influence: 19.6] [Reference Citation Analysis]
27 Dallas JW, Warne RW. Captivity and Animal Microbiomes: Potential Roles of Microbiota for Influencing Animal Conservation. Microb Ecol 2022. [PMID: 35316343 DOI: 10.1007/s00248-022-01991-0] [Reference Citation Analysis]
28 Zhu W, Yan J, Zhi C, Zhou Q, Yuan X. 1,25(OH) 2D3 deficiency-induced gut microbial dysbiosis degrades the colonic mucus barrier in Cyp27b1 knockout mouse model. Gut Pathog. 2019;11:8. [PMID: 30828386 DOI: 10.1186/s13099-019-0291-z] [Cited by in Crossref: 15] [Cited by in F6Publishing: 15] [Article Influence: 5.0] [Reference Citation Analysis]
29 Zheng Y, Yu J, Liang C, Li S, Wen X, Li Y. Characterization on gut microbiome of PCOS rats and its further design by shifts in high-fat diet and dihydrotestosterone induction in PCOS rats. Bioprocess Biosyst Eng 2021;44:953-64. [PMID: 32157446 DOI: 10.1007/s00449-020-02320-w] [Cited by in Crossref: 3] [Cited by in F6Publishing: 6] [Article Influence: 1.5] [Reference Citation Analysis]
30 Even G, Lokmer A, Rodrigues J, Audebert C, Viscogliosi E, Ségurel L, Chabé M. Changes in the Human Gut Microbiota Associated With Colonization by Blastocystis sp. and Entamoeba spp. in Non-Industrialized Populations. Front Cell Infect Microbiol 2021;11:533528. [PMID: 33816323 DOI: 10.3389/fcimb.2021.533528] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
31 Ceccarani C, Viganò I, Ottaviano E, Redaelli MG, Severgnini M, Vignoli A, Borghi E. Is Gut Microbiota a Key Player in Epilepsy Onset? A Longitudinal Study in Drug-Naive Children. Front Cell Infect Microbiol 2021;11:749509. [PMID: 34926315 DOI: 10.3389/fcimb.2021.749509] [Reference Citation Analysis]
32 Barone M, Turroni S, Rampelli S, Soverini M, D'Amico F, Biagi E, Brigidi P, Troiani E, Candela M. Gut microbiome response to a modern Paleolithic diet in a Western lifestyle context. PLoS One 2019;14:e0220619. [PMID: 31393934 DOI: 10.1371/journal.pone.0220619] [Cited by in Crossref: 29] [Cited by in F6Publishing: 23] [Article Influence: 9.7] [Reference Citation Analysis]
33 Chattopadhyay I, Shankar EM. SARS-CoV-2-Indigenous Microbiota Nexus: Does Gut Microbiota Contribute to Inflammation and Disease Severity in COVID-19? Front Cell Infect Microbiol 2021;11:590874. [PMID: 33791231 DOI: 10.3389/fcimb.2021.590874] [Cited by in Crossref: 1] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
34 Shatzkes K, Tang C, Singleton E, Shukla S, Zuena M, Gupta S, Dharani S, Rinaggio J, Connell ND, Kadouri DE. Effect of predatory bacteria on the gut bacterial microbiota in rats. Sci Rep 2017;7:43483. [PMID: 28262674 DOI: 10.1038/srep43483] [Cited by in Crossref: 30] [Cited by in F6Publishing: 24] [Article Influence: 6.0] [Reference Citation Analysis]
35 Piqué N, Berlanga M, Miñana-Galbis D. Health Benefits of Heat-Killed (Tyndallized) Probiotics: An Overview. Int J Mol Sci 2019;20:E2534. [PMID: 31126033 DOI: 10.3390/ijms20102534] [Cited by in Crossref: 108] [Cited by in F6Publishing: 84] [Article Influence: 36.0] [Reference Citation Analysis]
36 Mulder M, Radjabzadeh D, Kiefte-de Jong JC, Uitterlinden AG, Kraaij R, Stricker BH, Verbon A. Long-term effects of antimicrobial drugs on the composition of the human gut microbiota. Gut Microbes 2020;12:1795492. [PMID: 32991820 DOI: 10.1080/19490976.2020.1791677] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 5.0] [Reference Citation Analysis]
37 Khoo C, Duysburgh C, Marzorati M, Van den Abbeele P, Zhang D. A Freeze-Dried Cranberry Powder Consistently Enhances SCFA Production and Lowers Abundance of Opportunistic Pathogens In Vitro. BioTech 2022;11:14. [DOI: 10.3390/biotech11020014] [Reference Citation Analysis]
38 Kuo PH, Chung YE. Moody microbiome: Challenges and chances. J Formos Med Assoc 2019;118 Suppl 1:S42-54. [PMID: 30262220 DOI: 10.1016/j.jfma.2018.09.004] [Cited by in Crossref: 12] [Cited by in F6Publishing: 6] [Article Influence: 3.0] [Reference Citation Analysis]
39 Dikongué E, Ségurel L. Latitude as a co-driver of human gut microbial diversity? Bioessays 2017;39. [PMID: 28083908 DOI: 10.1002/bies.201600145] [Cited by in Crossref: 15] [Cited by in F6Publishing: 12] [Article Influence: 3.0] [Reference Citation Analysis]
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41 Hrncirova L, Machova V, Trckova E, Krejsek J, Hrncir T. Food Preservatives Induce Proteobacteria Dysbiosis in Human-Microbiota Associated Nod2-Deficient Mice. Microorganisms 2019;7:E383. [PMID: 31548508 DOI: 10.3390/microorganisms7100383] [Cited by in Crossref: 8] [Cited by in F6Publishing: 6] [Article Influence: 2.7] [Reference Citation Analysis]
42 Lapidot Y, Reshef L, Maya M, Cohen D, Gophna U, Muhsen K. Socioeconomic disparities and household crowding in association with the fecal microbiome of school-age children. NPJ Biofilms Microbiomes 2022;8:10. [PMID: 35241676 DOI: 10.1038/s41522-022-00271-6] [Reference Citation Analysis]
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44 Katz-Agranov N, Zandman-Goddard G. Autoimmunity and COVID-19 - The microbiotal connection. Autoimmun Rev 2021;20:102865. [PMID: 34118455 DOI: 10.1016/j.autrev.2021.102865] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
45 Huang R, Xie J, Liu X, Shen M. Sulfated modification enhances the modulatory effect of yam polysaccharide on gut microbiota in cyclophosphamide-treated mice. Food Res Int 2021;145:110393. [PMID: 34112396 DOI: 10.1016/j.foodres.2021.110393] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
46 Verduci E, Moretti F, Bassanini G, Banderali G, Rovelli V, Casiraghi MC, Morace G, Borgo F, Borghi E. Phenylketonuric diet negatively impacts on butyrate production. Nutr Metab Cardiovasc Dis 2018;28:385-92. [PMID: 29502926 DOI: 10.1016/j.numecd.2018.01.004] [Cited by in Crossref: 8] [Cited by in F6Publishing: 7] [Article Influence: 2.0] [Reference Citation Analysis]
47 Xiong J, Dai W, Zhu J, Liu K, Dong C, Qiu Q. The Underlying Ecological Processes of Gut Microbiota Among Cohabitating Retarded, Overgrown and Normal Shrimp. Microb Ecol 2017;73:988-99. [PMID: 27966036 DOI: 10.1007/s00248-016-0910-x] [Cited by in Crossref: 49] [Cited by in F6Publishing: 40] [Article Influence: 8.2] [Reference Citation Analysis]
48 Bonfiglio G, Neroni B, Radocchia G, Marazzato M, Pantanella F, Schippa S. Insight into the Possible Use of the Predator Bdellovibrio bacteriovorus as a Probiotic. Nutrients 2020;12:E2252. [PMID: 32731403 DOI: 10.3390/nu12082252] [Cited by in Crossref: 7] [Cited by in F6Publishing: 5] [Article Influence: 3.5] [Reference Citation Analysis]
49 Mo J, Gao L, Zhang N, Xie J, Li D, Shan T, Fan L. Structural and quantitative alterations of gut microbiota in experimental small bowel obstruction. PLoS One 2021;16:e0255651. [PMID: 34347831 DOI: 10.1371/journal.pone.0255651] [Reference Citation Analysis]
50 Jenkins TP, Formenti F, Castro C, Piubelli C, Perandin F, Buonfrate D, Otranto D, Griffin JL, Krause L, Bisoffi Z, Cantacessi C. A comprehensive analysis of the faecal microbiome and metabolome of Strongyloides stercoralis infected volunteers from a non-endemic area. Sci Rep 2018;8:15651. [PMID: 30353019 DOI: 10.1038/s41598-018-33937-3] [Cited by in Crossref: 20] [Cited by in F6Publishing: 19] [Article Influence: 5.0] [Reference Citation Analysis]
51 Sriwichaiin S, Kittichotirat W, Chunchai T, Chattipakorn N, Chattipakorn SC. Profiles of gut microbiota in obese-insulin-resistant rats treated with biotics. Eur J Nutr 2022. [PMID: 35199196 DOI: 10.1007/s00394-022-02839-6] [Reference Citation Analysis]
52 Zhu C, Wang X, Li J, Jiang R, Chen H, Chen T, Yang Y. Determine independent gut microbiota-diseases association by eliminating the effects of human lifestyle factors. BMC Microbiol 2022;22:4. [PMID: 34979898 DOI: 10.1186/s12866-021-02414-9] [Reference Citation Analysis]
53 Shi Y, Queller DC, Tian Y, Zhang S, Yan Q, He Z, He Z, Wu C, Wang C, Shu L. The Ecology and Evolution of Amoeba-Bacterium Interactions. Appl Environ Microbiol 2021;87:e01866-20. [PMID: 33158887 DOI: 10.1128/AEM.01866-20] [Cited by in Crossref: 4] [Cited by in F6Publishing: 1] [Article Influence: 4.0] [Reference Citation Analysis]
54 Pradhan S, Ray P, Aich P. Microbiota transplantation from younger to older mice could restore lost immunity to effectively clear salmonella infection in Th2-biased BALB/c mice. Life Sci 2022;288:120201. [PMID: 34864063 DOI: 10.1016/j.lfs.2021.120201] [Reference Citation Analysis]
55 Lee H, Slupsky CM, Heckmann AB, Christensen B, Peng Y, Li X, Hernell O, Lönnerdal B, Li Z. Milk Fat Globule Membrane as a Modulator of Infant Metabolism and Gut Microbiota: A Formula Supplement Narrowing the Metabolic Differences between Breastfed and Formula-Fed Infants. Mol Nutr Food Res 2021;65:e2000603. [PMID: 33285021 DOI: 10.1002/mnfr.202000603] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
56 Bunte S, Grone R, Keller B, Keller C, Galvez E, Strowig T, Kamphues J, Hankel J. Intestinal Microbiota of Fattening Pigs Offered Non-Fermented and Fermented Liquid Feed with and without the Supplementation of Non-Fermented Coarse Cereals. Microorganisms 2020;8:E638. [PMID: 32349407 DOI: 10.3390/microorganisms8050638] [Cited by in Crossref: 6] [Cited by in F6Publishing: 5] [Article Influence: 3.0] [Reference Citation Analysis]
57 Dai ZF, Ma XY, Yang RL, Wang HC, Xu DD, Yang JN, Guo XB, Meng SS, Xu R, Li YX, Xu Y, Li K, Lin XH. Intestinal flora alterations in patients with ulcerative colitis and their association with inflammation. Exp Ther Med 2021;22:1322. [PMID: 34630676 DOI: 10.3892/etm.2021.10757] [Reference Citation Analysis]
58 Li Y, Zhang Y, Wei K, He J, Ding N, Hua J, Zhou T, Niu F, Zhou G, Shi T, Zhang L, Liu Y. Review: Effect of Gut Microbiota and Its Metabolite SCFAs on Radiation-Induced Intestinal Injury. Front Cell Infect Microbiol 2021;11:577236. [PMID: 34307184 DOI: 10.3389/fcimb.2021.577236] [Reference Citation Analysis]
59 Cladis DP, Simpson AMR, Cooper KJ, Nakatsu CH, Ferruzzi MG, Weaver CM. Blueberry polyphenols alter gut microbiota & phenolic metabolism in rats. Food Funct 2021;12:2442-56. [PMID: 33629093 DOI: 10.1039/d0fo03457f] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
60 Liu F, Ren T, Li X, Zhai Q, Xu X, Zhang N, Jiang P, Niu Y, Lv L, Shi G, Feng N. Distinct Microbiomes of Gut and Saliva in Patients With Systemic Lupus Erythematous and Clinical Associations. Front Immunol 2021;12:626217. [PMID: 34276643 DOI: 10.3389/fimmu.2021.626217] [Reference Citation Analysis]
61 Nakamura Y, Kimura S, Hase K. M cell-dependent antigen uptake on follicle-associated epithelium for mucosal immune surveillance. Inflamm Regen 2018;38:15. [PMID: 30186536 DOI: 10.1186/s41232-018-0072-y] [Cited by in Crossref: 16] [Cited by in F6Publishing: 11] [Article Influence: 4.0] [Reference Citation Analysis]
62 Sorboni SG, Moghaddam HS, Jafarzadeh-Esfehani R, Soleimanpour S. A Comprehensive Review on the Role of the Gut Microbiome in Human Neurological Disorders. Clin Microbiol Rev 2022;:e0033820. [PMID: 34985325 DOI: 10.1128/CMR.00338-20] [Reference Citation Analysis]
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