BPG is committed to discovery and dissemination of knowledge
Cited by in F6Publishing
For: Costantini I, Cicchi R, Silvestri L, Vanzi F, Pavone FS. In-vivo and ex-vivo optical clearing methods for biological tissues: review. Biomed Opt Express 2019;10:5251-67. [PMID: 31646045 DOI: 10.1364/BOE.10.005251] [Cited by in Crossref: 56] [Cited by in F6Publishing: 67] [Article Influence: 18.7] [Reference Citation Analysis]
Number Citing Articles
1 Banerjee A, Poddar R. Enhanced visualization of tissue microstructures using swept-source optical coherence tomography and edible oil as optical clearing agent. Optik 2022;267:169693. [DOI: 10.1016/j.ijleo.2022.169693] [Reference Citation Analysis]
2 Schmitz D, Benning K, Schubert N, Minnerop M, Amunts K, Axer M. Fast data-driven computation and intuitive visualization of fiber orientation uncertainty in 3D-polarized light imaging. Front Phys 2022;10:958364. [DOI: 10.3389/fphy.2022.958364] [Reference Citation Analysis]
3 Kim H, Youn S, Kim J, Park S, Lee M, Hwang JY, Chang JH. Deep laser microscopy using optical clearing by ultrasound-induced gas bubbles. Nat Photon . [DOI: 10.1038/s41566-022-01068-x] [Reference Citation Analysis]
4 Varaka M, Vardaki MZ, Gaitanis G, Bassukas ID, Kourkoumelis N. The Effect of Different Optical Clearing Agents on the Attenuation Coefficient and Epidermal Thickness of Human Skin Assessed by Optical Coherence Tomography. Applied Sciences 2022;12:8277. [DOI: 10.3390/app12168277] [Reference Citation Analysis]
5 Tsabary A, Abookasis D. Improving reconstruction of targets hidden in scattering media by introducing the Lucy-Richardson deconvolution algorithm into a system of multiview optical projections. Journal of Modern Optics. [DOI: 10.1080/09500340.2022.2092225] [Reference Citation Analysis]
6 Genina EA. Tissue Optical Clearing: State of the Art and Prospects. Diagnostics (Basel) 2022;12:1534. [PMID: 35885440 DOI: 10.3390/diagnostics12071534] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
7 Pesce L, Scardigli M, Gavryusev V, Laurino A, Mazzamuto G, Brady N, Sancataldo G, Silvestri L, Destrieux C, Hof PR, Costantini I, Pavone FS. 3D molecular phenotyping of cleared human brain tissues with light-sheet fluorescence microscopy. Commun Biol 2022;5:447. [PMID: 35551498 DOI: 10.1038/s42003-022-03390-0] [Reference Citation Analysis]
8 Munck S, Cawthorne C, Escamilla-Ayala A, Kerstens A, Gabarre S, Wesencraft K, Battistella E, Craig R, Reynaud EG, Swoger J, McConnell G. Challenges and advances in optical 3D mesoscale imaging. J Microsc 2022. [PMID: 35460574 DOI: 10.1111/jmi.13109] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
9 Wu W, He S, Wu J, Chen C, Li X, Liu K, Qu JY. Long-term in vivo imaging of mouse spinal cord through an optically cleared intervertebral window. Nat Commun 2022;13:1959. [PMID: 35414131 DOI: 10.1038/s41467-022-29496-x] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
10 Wang J, Chawdhary G, Yang X, Morin F, Khalid-Raja M, Farrell J, MacDougall D, Chen F, Morris DP, Adamson RBA. Optical Clearing Agents for Optical Imaging Through Cartilage Tympanoplasties: A Preclinical Feasibility Study. Otol Neurotol 2022;43:e467-74. [PMID: 35239620 DOI: 10.1097/MAO.0000000000003502] [Reference Citation Analysis]
11 Sheet AH, Hamdy O, Abdel-salam Z, Abdel-harith M. Combining laser-irradiation and glycerol immersion of skeletal muscles to improve their optical transparency. Optics & Laser Technology 2022;148:107760. [DOI: 10.1016/j.optlastec.2021.107760] [Reference Citation Analysis]
12 Yendiki A, Aggarwal M, Axer M, Howard AFD, van Walsum AVC, Haber SN. Post mortem mapping of connectional anatomy for the validation of diffusion MRI. Neuroimage 2022;256:119146. [PMID: 35346838 DOI: 10.1016/j.neuroimage.2022.119146] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
13 Hristu R, Eftimie LG, Stanciu SG, Glogojeanu RR, Gheorghita P, Stanciu GA. Assessment of Extramammary Paget Disease by Two-Photon Microscopy. Front Med 2022;9:839786. [DOI: 10.3389/fmed.2022.839786] [Reference Citation Analysis]
14 Richardson DS, Guan W, Matsumoto K, Pan C, Chung K, Ertürk A, Ueda HR, Lichtman JW. TISSUE CLEARING. Nat Rev Methods Primers 2021;1:84. [PMID: 35128463 DOI: 10.1038/s43586-021-00080-9] [Cited by in Crossref: 6] [Cited by in F6Publishing: 9] [Article Influence: 6.0] [Reference Citation Analysis]
15 Das A, Raposo GCC, Lopes DS, da Silva EJ, Carneiro VSM, Mota CCBO, Amaral MM, Zezell DM, Barbosa-Silva R, Gomes ASL. Exploiting Nanomaterials for Optical Coherence Tomography and Photoacoustic Imaging in Nanodentistry. Nanomaterials (Basel) 2022;12:506. [PMID: 35159853 DOI: 10.3390/nano12030506] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
16 Richardson A, Fok S, Lee V, Rye K, Di Girolamo N, Cochran BJ. Use of High-Refractive Index Hydrogels and Tissue Clearing for Large Biological Sample Imaging. Gels 2022;8:32. [DOI: 10.3390/gels8010032] [Reference Citation Analysis]
17 Shemesh D, Aburus O, Turgeman G, Abookasis D. Quantification of the effectivity of laser therapy shortly following brain injury via dual-wavelength laser imaging. Optics & Laser Technology 2022;145:107506. [DOI: 10.1016/j.optlastec.2021.107506] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
18 Tuchin VV, Genina EA, Tuchina ES, Svetlakova AV, Svenskaya YI. Optical clearing of tissues: Issues of antimicrobial phototherapy and drug delivery. Adv Drug Deliv Rev 2022;180:114037. [PMID: 34752842 DOI: 10.1016/j.addr.2021.114037] [Cited by in Crossref: 7] [Cited by in F6Publishing: 6] [Article Influence: 7.0] [Reference Citation Analysis]
19 Rusch H, Brammerloh M, Stieler J, Sonntag M, Mohammadi S, Weiskopf N, Arendt T, Kirilina E, Morawski M. Finding the best clearing approach - Towards 3D wide-scale multimodal imaging of aged human brain tissue. Neuroimage 2021;247:118832. [PMID: 34929383 DOI: 10.1016/j.neuroimage.2021.118832] [Cited by in Crossref: 3] [Cited by in F6Publishing: 1] [Article Influence: 3.0] [Reference Citation Analysis]
20 Liu L, Xia X, Xiang F, Gao Y, Li X, Li H, Zheng W. F-CUBIC: a rapid optical clearing method optimized by quantitative evaluation. Biomed Opt Express 2022;13:237. [DOI: 10.1364/boe.442976] [Reference Citation Analysis]
21 Scardigli M, Pesce L, Brady N, Mazzamuto G, Gavryusev V, Silvestri L, Hof PR, Destrieux C, Costantini I, Pavone FS. Comparison of Different Tissue Clearing Methods for Three-Dimensional Reconstruction of Human Brain Cellular Anatomy Using Advanced Imaging Techniques. Front Neuroanat 2021;15:752234. [PMID: 34867215 DOI: 10.3389/fnana.2021.752234] [Reference Citation Analysis]
22 Khlebtsov B, Burov A, Pylaev T, Savkina A, Prikhozhdenko E, Bratashov D, Khlebtsov N. Improving SERS bioimaging of subcutaneous phantom in vivo with optical clearing. J Biophotonics 2021;:e202100281. [PMID: 34856066 DOI: 10.1002/jbio.202100281] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
23 Stelzer EHK, Strobl F, Chang B, Preusser F, Preibisch S, Mcdole K, Fiolka R. Light sheet fluorescence microscopy. Nat Rev Methods Primers 2021;1. [DOI: 10.1038/s43586-021-00069-4] [Cited by in Crossref: 13] [Cited by in F6Publishing: 7] [Article Influence: 13.0] [Reference Citation Analysis]
24 Zhu J, Li D, Yu T, Zhu D. Optical angiography for diabetes-induced pathological changes in microvascular structure and function: An overview. J Innov Opt Health Sci 2022;15:2230002. [DOI: 10.1142/s1793545822300026] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
25 Tsabary A, Abookasis D. Optimized reconstruction processing of targets hidden in turbid environment from multi-perspective images assisted with sorting algorithm-based quality metrics. Optik 2021;243:167349. [DOI: 10.1016/j.ijleo.2021.167349] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
26 Wan P, Li Y, Zhu J, Xu J, Liu X, Yu T, Zhu D. FDISCO+: a clearing method for robust fluorescence preservation of cleared samples. Neurophotonics 2021;8:035007. [PMID: 34514032 DOI: 10.1117/1.NPh.8.3.035007] [Reference Citation Analysis]
27 McMillan L, Reidt S, McNicol C, Barnard IRM, MacDonald M, Brown CTA, Wood K. Imaging in thick samples, a phased Monte Carlo radiation transfer algorithm. J Biomed Opt 2021;26. [PMID: 34490761 DOI: 10.1117/1.JBO.26.9.096004] [Reference Citation Analysis]
28 Zhu J, Ma Y, Xu J, Li Y, Wan P, Qi Y, Yu T, Zhu D. Dec-DISCO: decolorization DISCO clearing for seeing through the biological architectures of heme-rich organs. Biomed Opt Express 2021;12:5499-513. [PMID: 34692197 DOI: 10.1364/BOE.431397] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
29 Huang S, Irawati N, Chien Y, Lin J, Tsai Y, Wang P, Chu L, Li M, Chiang A, Tsia KK, Chu S. Optical volumetric brain imaging: speed, depth, and resolution enhancement. J Phys D: Appl Phys 2021;54:323002. [DOI: 10.1088/1361-6463/abff7b] [Cited by in Crossref: 7] [Cited by in F6Publishing: 3] [Article Influence: 7.0] [Reference Citation Analysis]
30 Matryba P, Łukasiewicz K, Pawłowska M, Tomczuk J, Gołąb J. Can Developments in Tissue Optical Clearing Aid Super-Resolution Microscopy Imaging? Int J Mol Sci 2021;22:6730. [PMID: 34201632 DOI: 10.3390/ijms22136730] [Reference Citation Analysis]
31 Costantini I, Mazzamuto G, Roffilli M, Laurino A, Maria Castelli F, Neri M, Lughi G, Simonetto A, Lazzeri E, Pesce L, Destrieux C, Silvestri L, Conti V, Guerrini R, Saverio Pavone F. Large-scale, cell-resolution volumetric mapping allows layer-specific investigation of human brain cytoarchitecture. Biomed Opt Express 2021;12:3684-99. [PMID: 34221688 DOI: 10.1364/BOE.415555] [Cited by in Crossref: 2] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
32 Weiss KR, Voigt FF, Shepherd DP, Huisken J. Tutorial: practical considerations for tissue clearing and imaging. Nat Protoc 2021;16:2732-48. [PMID: 34021294 DOI: 10.1038/s41596-021-00502-8] [Cited by in Crossref: 1] [Cited by in F6Publishing: 14] [Article Influence: 1.0] [Reference Citation Analysis]
33 Dybala MP, Hara M. In Vivo and In Situ Approach to Study Islet Microcirculation: A Mini-Review. Front Endocrinol (Lausanne) 2021;12:602620. [PMID: 34040578 DOI: 10.3389/fendo.2021.602620] [Reference Citation Analysis]
34 Hu L, Hu S, Gong W, Si K. Image enhancement for fluorescence microscopy based on deep learning with prior knowledge of aberration. Opt Lett 2021;46:2055-8. [PMID: 33929417 DOI: 10.1364/OL.418997] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
35 Campbell-Thompson M, Tang SC. Pancreas Optical Clearing and 3-D Microscopy in Health and Diabetes. Front Endocrinol (Lausanne) 2021;12:644826. [PMID: 33981285 DOI: 10.3389/fendo.2021.644826] [Cited by in Crossref: 1] [Cited by in F6Publishing: 4] [Article Influence: 1.0] [Reference Citation Analysis]
36 Kolesová H, Olejníčková V, Kvasilová A, Gregorovičová M, Sedmera D. Tissue clearing and imaging methods for cardiovascular development. iScience 2021;24:102387. [PMID: 33981974 DOI: 10.1016/j.isci.2021.102387] [Cited by in Crossref: 2] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
37 Costantini I, Baria E, Sorelli M, Matuschke F, Giardini F, Menzel M, Mazzamuto G, Silvestri L, Cicchi R, Amunts K, Axer M, Pavone FS. Autofluorescence enhancement for label-free imaging of myelinated fibers in mammalian brains. Sci Rep 2021;11:8038. [PMID: 33850168 DOI: 10.1038/s41598-021-86092-7] [Cited by in Crossref: 1] [Cited by in F6Publishing: 5] [Article Influence: 1.0] [Reference Citation Analysis]
38 Meador WD, Zhou J, Malinowski M, Jazwiec T, Calve S, Timek TA, Rausch MK. The effects of a simple optical clearing protocol on the mechanics of collagenous soft tissue. J Biomech 2021;122:110413. [PMID: 33905970 DOI: 10.1016/j.jbiomech.2021.110413] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
39 Kim MS, Ahn JH, Mo JE, Song HY, Cheon D, Yoo SH, Choi HJ. Optimizing tissue clearing and imaging methods for human brain tissue. J Int Med Res 2021;49:3000605211001729. [PMID: 33771067 DOI: 10.1177/03000605211001729] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
40 Borile G, Sandrin D, Filippi A, Anderson KI, Romanato F. Label-Free Multiphoton Microscopy: Much More Than Fancy Images. Int J Mol Sci 2021;22:2657. [PMID: 33800802 DOI: 10.3390/ijms22052657] [Cited by in F6Publishing: 5] [Reference Citation Analysis]
41 Tan C, Robbins EM, Wu B, Cui XT. Recent Advances in In Vivo Neurochemical Monitoring. Micromachines (Basel) 2021;12:208. [PMID: 33670703 DOI: 10.3390/mi12020208] [Cited by in Crossref: 16] [Cited by in F6Publishing: 14] [Article Influence: 16.0] [Reference Citation Analysis]
42 Kong C, Bobe S, Pilger C, Lachetta M, Øie CI, Kirschnick N, Mönkemöller V, Hübner W, Förster C, Schüttpelz M, Kiefer F, Huser T, Schulte Am Esch J. Multiscale and Multimodal Optical Imaging of the Ultrastructure of Human Liver Biopsies. Front Physiol 2021;12:637136. [PMID: 33679449 DOI: 10.3389/fphys.2021.637136] [Cited by in Crossref: 2] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
43 James DS, Campagnola PJ. Recent Advancements in Optical Harmonic Generation Microscopy: Applications and Perspectives. BME Frontiers 2021;2021:1-24. [DOI: 10.34133/2021/3973857] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 2.0] [Reference Citation Analysis]
44 Nikitkina AI, Bikmulina PY, Gafarova ER, Kosheleva NV, Efremov YM, Bezrukov EA, Butnaru DV, Dolganova IN, Chernomyrdin NV, Cherkasova OP, Gavdush AA, Timashev PS. Terahertz radiation and the skin: a review. J Biomed Opt 2021;26. [PMID: 33583155 DOI: 10.1117/1.JBO.26.4.043005] [Cited by in Crossref: 1] [Cited by in F6Publishing: 19] [Article Influence: 1.0] [Reference Citation Analysis]
45 Hough M, Fenlon M, Glazier A, Short C, Fernandez GE, Xu J, Mahdi E, Asahina K, Wang KS. Urea-based amino sugar agent clears murine liver and preserves protein fluorescence and lipophilic dyes. Biotechniques 2021;70:72-80. [PMID: 33467918 DOI: 10.2144/btn-2020-0063] [Reference Citation Analysis]
46 Zhao J, Lai HM, Qi Y, He D, Sun H. Current Status of Tissue Clearing and the Path Forward in Neuroscience. ACS Chem Neurosci 2021;12:5-29. [PMID: 33326739 DOI: 10.1021/acschemneuro.0c00563] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
47 Yang J, Chen IA, Chang S, Tang J, Lee B, Kılıç K, Sunil S, Wang H, Varadarajan D, Magnain C, Chen SC, Costantini I, Pavone F, Fischl B, Boas DA. Improving the characterization of ex vivo human brain optical properties using high numerical aperture optical coherence tomography by spatially constraining the confocal parameters. Neurophotonics 2020;7:045005. [PMID: 33094126 DOI: 10.1117/1.NPh.7.4.045005] [Cited by in Crossref: 2] [Cited by in F6Publishing: 4] [Article Influence: 1.0] [Reference Citation Analysis]
48 Franceschini A, Costantini I, Pavone FS, Silvestri L. Dissecting Neuronal Activation on a Brain-Wide Scale With Immediate Early Genes. Front Neurosci 2020;14:569517. [PMID: 33192255 DOI: 10.3389/fnins.2020.569517] [Cited by in Crossref: 3] [Cited by in F6Publishing: 9] [Article Influence: 1.5] [Reference Citation Analysis]
49 Daniel M, Dubreil L, Fleurisson R, Judor JP, Bresson T, Brouard S, Favier A, Charreyre MT, Conchon S. Multiscale fluorescent tracking of immune cells in the liver with a highly biocompatible far-red emitting polymer probe. Sci Rep 2020;10:17546. [PMID: 33067572 DOI: 10.1038/s41598-020-74621-9] [Reference Citation Analysis]
50 Longo E, Sancey L, Flenner S, Kubec A, Bonnin A, David C, Müller M, Greving I. X-ray Zernike phase contrast tomography: 3D ROI visualization of mm-sized mice organ tissues down to sub-cellular components. Biomed Opt Express 2020;11:5506-17. [PMID: 33149967 DOI: 10.1364/BOE.396695] [Cited by in Crossref: 3] [Cited by in F6Publishing: 6] [Article Influence: 1.5] [Reference Citation Analysis]
51 Gómez-Gaviro MV, Sanderson D, Ripoll J, Desco M. Biomedical Applications of Tissue Clearing and Three-Dimensional Imaging in Health and Disease. iScience 2020;23:101432. [PMID: 32805648 DOI: 10.1016/j.isci.2020.101432] [Cited by in Crossref: 17] [Cited by in F6Publishing: 33] [Article Influence: 8.5] [Reference Citation Analysis]
52 Yanina IY, Schleusener J, Lademann J, Tuchin VV, Darvin ME. The Effectiveness of Glycerol Solutions for Optical Clearing of the Intact Skin as Measured by Confocal Raman Microspectroscopy. Opt Spectrosc 2020;128:759-65. [DOI: 10.1134/s0030400x20060259] [Cited by in Crossref: 2] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
53 Zhu J, Yu T, Li Y, Xu J, Qi Y, Yao Y, Ma Y, Wan P, Chen Z, Li X, Gong H, Luo Q, Zhu D. MACS: Rapid Aqueous Clearing System for 3D Mapping of Intact Organs. Adv Sci (Weinh) 2020;7:1903185. [PMID: 32328422 DOI: 10.1002/advs.201903185] [Cited by in Crossref: 28] [Cited by in F6Publishing: 25] [Article Influence: 14.0] [Reference Citation Analysis]
54 Hernández JM, Buisson A, Wang I, Vial JC. Improved optical slicing by stimulated emission depletion light sheet microscopy. Biomed Opt Express 2020;11:660-71. [PMID: 32206391 DOI: 10.1364/BOE.379646] [Cited by in Crossref: 4] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
55 Li Y, Xu J, Zhu J, Yu T, Zhu D. Three-dimensional visualization of intramuscular innervation in intact adult skeletal muscle by a modified iDISCO method. Neurophotonics 2020;7:015003. [PMID: 32016132 DOI: 10.1117/1.NPh.7.1.015003] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 1.5] [Reference Citation Analysis]