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For: Shen H, Ye F, Xie L, Yang J, Li Z, Xu P, Meng F, Li L, Chen Y, Bo X. Metagenomic sequencing of bile from gallstone patients to identify different microbial community patterns and novel biliary bacteria. Sci Rep. 2015;5:17450. [PMID: 26625708 DOI: 10.1038/srep17450] [Cited by in Crossref: 33] [Cited by in F6Publishing: 33] [Article Influence: 4.7] [Reference Citation Analysis]
Number Citing Articles
1 Shen H, Zhu J, Ye F, Xu D, Fang L, Yang J, Lv H, Lou Q, Jin H, Ni M, Zhang X. Biliary Microbial Structure of Gallstone Patients With a History of Endoscopic Sphincterotomy Surgery. Front Cell Infect Microbiol 2020;10:594778. [PMID: 33585269 DOI: 10.3389/fcimb.2020.594778] [Reference Citation Analysis]
2 Chen GL, Zhang Y, Wang WY, Ji XL, Meng F, Xu PS, Yang NM, Ye FQ, Bo XC. Partners of patients with ulcerative colitis exhibit a biologically relevant dysbiosis in fecal microbial metacommunities. World J Gastroenterol 2017; 23(25): 4624-4631 [PMID: 28740351 DOI: 10.3748/wjg.v23.i25.4624] [Cited by in CrossRef: 17] [Cited by in F6Publishing: 13] [Article Influence: 3.4] [Reference Citation Analysis]
3 Yan Q, Zhang S, Li S, Wang G, Zhang A, Jin T, Zhang Y, Lv Q, Xiao M, Sun Y, Li X, Cui S, Li R, Ma X, Wang C, Tian X, Duan X, Xin Y, Mao X, Ma Y. Cultivation and Genomic Characterization of the Bile Bacterial Species From Cholecystitis Patients. Front Microbiol 2021;12:739621. [PMID: 34790179 DOI: 10.3389/fmicb.2021.739621] [Reference Citation Analysis]
4 Lyu Z, Yu T, Zhang L, Xu X, Zhang Y, Li J, Li Z, Zhang W, Hou S. Analysis of the relationship between bile duct and duodenal microbiota reveals that potential dysbacteriosis is the main cause of primary common bile duct stones. Synth Syst Biotechnol 2021;6:414-28. [PMID: 34901480 DOI: 10.1016/j.synbio.2021.11.002] [Reference Citation Analysis]
5 Riveras E, Azocar L, Moyano TC, Ocares M, Molina H, Romero D, Roa JC, Valbuena JR, Gutiérrez RA, Miquel JF. Transcriptomic profiles reveal differences in zinc metabolism, inflammation, and tight junction proteins in duodenum from cholesterol gallstone subjects. Sci Rep 2020;10:7448. [PMID: 32366946 DOI: 10.1038/s41598-020-64137-7] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
6 Ryu KH. [Gut Microbiota and Pancreatobiliary System]. Korean J Gastroenterol 2020;75:231-9. [PMID: 32448854 DOI: 10.4166/kjg.2020.75.5.231] [Reference Citation Analysis]
7 Saltykova IV, Petrov VA, Logacheva MD, Ivanova PG, Merzlikin NV, Sazonov AE, Ogorodova LM, Brindley PJ. Biliary Microbiota, Gallstone Disease and Infection with Opisthorchis felineus. PLoS Negl Trop Dis 2016;10:e0004809. [PMID: 27447938 DOI: 10.1371/journal.pntd.0004809] [Cited by in Crossref: 24] [Cited by in F6Publishing: 18] [Article Influence: 4.0] [Reference Citation Analysis]
8 Chen B, Fu SW, Lu L, Zhao H. A Preliminary Study of Biliary Microbiota in Patients with Bile Duct Stones or Distal Cholangiocarcinoma. Biomed Res Int 2019;2019:1092563. [PMID: 31662965 DOI: 10.1155/2019/1092563] [Cited by in Crossref: 9] [Cited by in F6Publishing: 13] [Article Influence: 3.0] [Reference Citation Analysis]
9 Rogers MB, Aveson V, Firek B, Yeh A, Brooks B, Brower-Sinning R, Steve J, Banfield JF, Zureikat A, Hogg M, Boone BA, Zeh HJ, Morowitz MJ. Disturbances of the Perioperative Microbiome Across Multiple Body Sites in Patients Undergoing Pancreaticoduodenectomy. Pancreas 2017;46:260-7. [PMID: 27846140 DOI: 10.1097/MPA.0000000000000726] [Cited by in Crossref: 26] [Cited by in F6Publishing: 11] [Article Influence: 6.5] [Reference Citation Analysis]
10 Han J, Wu S, Fan Y, Tian Y, Kong J. Biliary Microbiota in Choledocholithiasis and Correlation With Duodenal Microbiota. Front Cell Infect Microbiol 2021;11:625589. [PMID: 33996618 DOI: 10.3389/fcimb.2021.625589] [Reference Citation Analysis]
11 Feng R, Zhang T, Kayani MUR, Wang Z, Shen Y, Su KL, Bielike K, Chen L. Patients with Primary and Secondary Bile Duct Stones Harbor Distinct Biliary Microbial Composition and Metabolic Potential. Front Cell Infect Microbiol 2022;12:881489. [DOI: 10.3389/fcimb.2022.881489] [Reference Citation Analysis]
12 Li Y, Tan WH, Wu JC, Huang ZX, Shang YY, Liang B, Chen JH, Pang R, Xie XQ, Zhang JM, Ding Y, Xue L, Chen MT, Wang J, Wu QP. Microbiologic risk factors of recurrent choledocholithiasis post-endoscopic sphincterotomy. World J Gastroenterol 2022; 28(12): 1257-1271 [DOI: 10.3748/wjg.v28.i12.1257] [Reference Citation Analysis]
13 Geerlings SY, Kostopoulos I, de Vos WM, Belzer C. Akkermansia muciniphila in the Human Gastrointestinal Tract: When, Where, and How? Microorganisms 2018;6:E75. [PMID: 30041463 DOI: 10.3390/microorganisms6030075] [Cited by in Crossref: 123] [Cited by in F6Publishing: 105] [Article Influence: 30.8] [Reference Citation Analysis]
14 Gutiérrez-Díaz I, Molinero N, Cabrera A, Rodríguez JI, Margolles A, Delgado S, González S. Diet: Cause or Consequence of the Microbial Profile of Cholelithiasis Disease? Nutrients 2018;10:E1307. [PMID: 30223526 DOI: 10.3390/nu10091307] [Cited by in Crossref: 8] [Cited by in F6Publishing: 7] [Article Influence: 2.0] [Reference Citation Analysis]
15 Kose SH, Grice K, Orsi WD, Ballal M, Coolen MJL. Metagenomics of pigmented and cholesterol gallstones: the putative role of bacteria. Sci Rep 2018;8:11218. [PMID: 30046045 DOI: 10.1038/s41598-018-29571-8] [Cited by in Crossref: 7] [Cited by in F6Publishing: 2] [Article Influence: 1.8] [Reference Citation Analysis]
16 Kim B, Park JS, Bae J, Hwang N. Bile Microbiota in Patients with Pigment Common Bile Duct Stones. J Korean Med Sci 2021;36:e94. [PMID: 33876584 DOI: 10.3346/jkms.2021.36.e94] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
17 Zhou Z, Nie SD, Jiang B, Wang J, Lv P. Risk factors for extrahepatic cholangiocarcinoma: a case-control study in China. Eur J Cancer Prev 2019;28:254-7. [PMID: 30299315 DOI: 10.1097/CEJ.0000000000000468] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 1.0] [Reference Citation Analysis]
18 Molinero N, Ruiz L, Milani C, Gutiérrez-Díaz I, Sánchez B, Mangifesta M, Segura J, Cambero I, Campelo AB, García-Bernardo CM, Cabrera A, Rodríguez JI, González S, Rodríguez JM, Ventura M, Delgado S, Margolles A. The human gallbladder microbiome is related to the physiological state and the biliary metabolic profile. Microbiome 2019;7:100. [PMID: 31272480 DOI: 10.1186/s40168-019-0712-8] [Cited by in Crossref: 27] [Cited by in F6Publishing: 26] [Article Influence: 9.0] [Reference Citation Analysis]
19 Petrov VA, Fernández-Peralbo MA, Derks R, Knyazeva EM, Merzlikin NV, Sazonov AE, Mayboroda OA, Saltykova IV. Biliary Microbiota and Bile Acid Composition in Cholelithiasis. Biomed Res Int 2020;2020:1242364. [PMID: 32714973 DOI: 10.1155/2020/1242364] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
20 Nascimento FSD, Suzuki MO, Taba JV, de Mattos VC, Pipek LZ, D'Albuquerque EMC, Iuamoto L, Meyer A, Andraus W, Pinho JRR, de Moura EGH, Setubal JC, Carneiro-D'Albuquerque LA. Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol. PLoS One 2020;15:e0242553. [PMID: 33211762 DOI: 10.1371/journal.pone.0242553] [Reference Citation Analysis]
21 Grigor'eva IN, Romanova TI. Gallstone Disease and Microbiome. Microorganisms 2020;8:E835. [PMID: 32498344 DOI: 10.3390/microorganisms8060835] [Cited by in Crossref: 10] [Cited by in F6Publishing: 8] [Article Influence: 5.0] [Reference Citation Analysis]
22 Ruan L, Wu D, Li X, Huang Q, Lin L, Lin J, Chen L, Xu P, Jin J, Yang N, Li X. Analysis of microbial community composition and diversity in postoperative intracranial infection using high‑throughput sequencing. Mol Med Rep 2017;16:3938-46. [PMID: 29067467 DOI: 10.3892/mmr.2017.7082] [Cited by in Crossref: 10] [Cited by in F6Publishing: 5] [Article Influence: 2.0] [Reference Citation Analysis]
23 Pereira P, Aho V, Arola J, Boyd S, Jokelainen K, Paulin L, Auvinen P, Färkkilä M. Bile microbiota in primary sclerosing cholangitis: Impact on disease progression and development of biliary dysplasia. PLoS One 2017;12:e0182924. [PMID: 28796833 DOI: 10.1371/journal.pone.0182924] [Cited by in Crossref: 30] [Cited by in F6Publishing: 30] [Article Influence: 6.0] [Reference Citation Analysis]
24 Wang J, Ye F, Cheng X, Zhang X, Liu F, Liu G, Ni M, Qiao S, Zhou W, Zhang Y. The Effects of LW-AFC on Intestinal Microbiome in Senescence-Accelerated Mouse Prone 8 Strain, a Mouse Model of Alzheimer’s Disease. JAD 2016;53:907-19. [DOI: 10.3233/jad-160138] [Cited by in Crossref: 28] [Cited by in F6Publishing: 13] [Article Influence: 4.7] [Reference Citation Analysis]
25 Zhang J, Chen Z, Yu H, Lu Y, Yu W, Miao M, Shi H. Anti-aging effects of a functional food via the action of gut microbiota and metabolites in aging mice. Aging (Albany NY) 2021;13:17880-900. [PMID: 33878733 DOI: 10.18632/aging.202873] [Reference Citation Analysis]
26 Özdirik B, Müller T, Wree A, Tacke F, Sigal M. The Role of Microbiota in Primary Sclerosing Cholangitis and Related Biliary Malignancies. Int J Mol Sci 2021;22:6975. [PMID: 34203536 DOI: 10.3390/ijms22136975] [Reference Citation Analysis]
27 Ye C, Zhou W, Zhang H, Miao L, Lv G. Alterations of the Bile Microbiome in Recurrent Common Bile Duct Stone. Biomed Res Int 2020;2020:4637560. [PMID: 33062679 DOI: 10.1155/2020/4637560] [Reference Citation Analysis]
28 Philips CA, Phadke N, Ganesan K, Rajesh S, Padsalgi G, Ahamed R, John SK, Valiathan GC, Augustine P. Gut Microbiota in Alcoholic Hepatitis is Disparate from Those in Acute Alcoholic Pancreatitis and Biliary Disease. J Clin Exp Hepatol 2019;9:690-8. [PMID: 31889749 DOI: 10.1016/j.jceh.2019.04.001] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 0.7] [Reference Citation Analysis]
29 Saab M, Mestivier D, Sohrabi M, Rodriguez C, Khonsari MR, Faraji A, Sobhani I. Characterization of biliary microbiota dysbiosis in extrahepatic cholangiocarcinoma. PLoS One 2021;16:e0247798. [PMID: 33690612 DOI: 10.1371/journal.pone.0247798] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
30 Gomez A, Nelson KE. The Oral Microbiome of Children: Development, Disease, and Implications Beyond Oral Health. Microb Ecol 2017;73:492-503. [PMID: 27628595 DOI: 10.1007/s00248-016-0854-1] [Cited by in Crossref: 64] [Cited by in F6Publishing: 52] [Article Influence: 10.7] [Reference Citation Analysis]
31 Pellock SJ, Redinbo MR. Glucuronides in the gut: Sugar-driven symbioses between microbe and host. J Biol Chem 2017;292:8569-76. [PMID: 28389557 DOI: 10.1074/jbc.R116.767434] [Cited by in Crossref: 77] [Cited by in F6Publishing: 39] [Article Influence: 15.4] [Reference Citation Analysis]
32 Sabater C, Molinero N, Ferrer M, Bernardo CMG, Delgado S, Margolles A. Functional Characterisation of Bile Metagenome: Study of Metagenomic Dark Matter. Microorganisms 2021;9:2201. [PMID: 34835325 DOI: 10.3390/microorganisms9112201] [Reference Citation Analysis]
33 Tsuchiya Y, Loza E, Villa-Gomez G, Trujillo CC, Baez S, Asai T, Ikoma T, Endoh K, Nakamura K. Metagenomics of Microbial Communities in Gallbladder Bile from Patients with Gallbladder Cancer or Cholelithiasis. Asian Pac J Cancer Prev 2018;19:961-7. [PMID: 29693356 DOI: 10.22034/APJCP.2018.19.4.961] [Cited by in F6Publishing: 7] [Reference Citation Analysis]
34 Sharma N, Yadav M, Tripathi G, Mathew B, Bindal V, Falari S, Pamecha V, Maras JS. Bile multi-omics analysis classifies lipid species and microbial peptides predictive of carcinoma of gallbladder. Hepatology 2022. [PMID: 35357716 DOI: 10.1002/hep.32496] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
35 Wang Y, Qi M, Qin C, Hong J. Role of the biliary microbiome in gallstone disease. Expert Rev Gastroenterol Hepatol 2018;12:1193-205. [PMID: 30791792 DOI: 10.1080/17474124.2018.1533812] [Cited by in Crossref: 7] [Cited by in F6Publishing: 6] [Article Influence: 1.8] [Reference Citation Analysis]
36 Ye F, Shen H, Li Z, Meng F, Li L, Yang J, Chen Y, Bo X, Zhang X, Ni M. Influence of the Biliary System on Biliary Bacteria Revealed by Bacterial Communities of the Human Biliary and Upper Digestive Tracts. PLoS One. 2016;11:e0150519. [PMID: 26930491 DOI: 10.1371/journal.pone.0150519] [Cited by in Crossref: 28] [Cited by in F6Publishing: 28] [Article Influence: 4.7] [Reference Citation Analysis]
37 Di Carlo P, Serra N, D'Arpa F, Agrusa A, Gulotta G, Fasciana T, Rodolico V, Giammanco A, Sergi C. The microbiota of the bilio-pancreatic system: a cohort, STROBE-compliant study. Infect Drug Resist 2019;12:1513-27. [PMID: 31354308 DOI: 10.2147/IDR.S200378] [Cited by in Crossref: 8] [Cited by in F6Publishing: 5] [Article Influence: 2.7] [Reference Citation Analysis]
38 Liu Y, Sun LY, Zhu ZJ, Wei L, Qu W, Zeng ZG. Bile microbiota: new insights into biliary complications in liver transplant recipients. Ann Transl Med. 2020;8:354. [PMID: 32355798 DOI: 10.21037/atm.2020.02.60] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
39 Whittle E, Yonkus JA, Jeraldo P, Alva-Ruiz R, Nelson H, Kendrick ML, Grys TE, Patel R, Truty MJ, Chia N. Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site Infections. mSphere 2022;:e0096421. [PMID: 35171692 DOI: 10.1128/msphere.00964-21] [Reference Citation Analysis]
40 Grigor'eva IN. Gallstone Disease, Obesity and the Firmicutes/Bacteroidetes Ratio as a Possible Biomarker of Gut Dysbiosis. J Pers Med 2020;11:13. [PMID: 33375615 DOI: 10.3390/jpm11010013] [Cited by in Crossref: 7] [Cited by in F6Publishing: 9] [Article Influence: 3.5] [Reference Citation Analysis]
41 Xu N, Kan P, Yao X, Yang P, Wang J, Xiang L, Zhu Y. Astragaloside IV reversed the autophagy and oxidative stress induced by the intestinal microbiota of AIS in mice. J Microbiol 2018;56:838-46. [PMID: 30353470 DOI: 10.1007/s12275-018-8327-5] [Cited by in Crossref: 17] [Cited by in F6Publishing: 14] [Article Influence: 4.3] [Reference Citation Analysis]