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For: Johnston AD, Simões-Pires CA, Thompson TV, Suzuki M, Greally JM. Functional genetic variants can mediate their regulatory effects through alteration of transcription factor binding. Nat Commun 2019;10:3472. [PMID: 31375681 DOI: 10.1038/s41467-019-11412-5] [Cited by in Crossref: 21] [Cited by in F6Publishing: 25] [Article Influence: 7.0] [Reference Citation Analysis]
Number Citing Articles
1 Jain M, Bansal J, Rajkumar MS, Garg R. An integrated transcriptome mapping the regulatory network of coding and long non-coding RNAs provides a genomics resource in chickpea. Commun Biol 2022;5:1106. [PMID: 36261617 DOI: 10.1038/s42003-022-04083-4] [Reference Citation Analysis]
2 Sandholm N, Rubio García A, Pekalski ML, Inshaw JRJ, Cutler AJ, Todd JA. Thymocyte regulatory variant alters transcription factor binding and protects from type 1 diabetes in infants. Sci Rep 2022;12. [DOI: 10.1038/s41598-022-18296-4] [Reference Citation Analysis]
3 Lim CKW, McCallister TX, Saporito-Magriña C, McPheron GD, Krishnan R, Zeballos C MA, Powell JE, Clark LV, Perez-Pinera P, Gaj T. CRISPR base editing of cis-regulatory elements enables the perturbation of neurodegeneration-linked genes. Mol Ther 2022:S1525-0016(22)00496-8. [PMID: 35965414 DOI: 10.1016/j.ymthe.2022.08.008] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
4 Lim CK, Mccallister TX, Saporito-magriña C, Mcpheron GD, Krishnan R, Zeballos C MA, Powell JE, Clark LV, Perez-pinera P, Gaj T. CRISPR base editing of cis-regulatory elements enables target gene perturbations.. [DOI: 10.1101/2022.05.26.493649] [Reference Citation Analysis]
5 Solé-Morata N, Baenas I, Etxandi M, Granero R, Forcales SV, Gené M, Barrot C, Gómez-Peña M, Menchón JM, Ramoz N, Gorwood P, Fernández-Aranda F, Jiménez-Murcia S. The role of neurotrophin genes involved in the vulnerability to gambling disorder. Sci Rep 2022;12:6925. [PMID: 35484167 DOI: 10.1038/s41598-022-10391-w] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
6 Li JR, Tang M, Li Y, Amos CI, Cheng C. Genetic variants associated mRNA stability in lung. BMC Genomics 2022;23:196. [PMID: 35272635 DOI: 10.1186/s12864-022-08405-y] [Reference Citation Analysis]
7 Rajkumar MS, Garg R, Jain M. Genome-wide discovery of DNA polymorphisms via resequencing of chickpea cultivars with contrasting response to drought stress. Physiol Plant 2021;:e13611. [PMID: 34957568 DOI: 10.1111/ppl.13611] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
8 Gokuladhas S, Schierding W, Fadason T, Choi M, O’sullivan JM. Deciphering the genetic links between NAFLD and co-occurring conditions using a liver gene regulatory network.. [DOI: 10.1101/2021.12.08.471841] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
9 Johnston AD, Abdulrazak A, Sato H, Maqbool SB, Suzuki M, Greally JM, Simões-Pires CA. A Cellular Stress Response Induced by the CRISPR-dCas9 Activation System Is Not Heritable Through Cell Divisions. CRISPR J 2020;3:188-97. [PMID: 33560917 DOI: 10.1089/crispr.2019.0077] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
10 Guan Y, Liang X, Ma Z, Hu H, Liu H, Miao Z, Linkermann A, Hellwege JN, Voight BF, Susztak K. A single genetic locus controls both expression of DPEP1/CHMP1A and kidney disease development via ferroptosis. Nat Commun 2021;12:5078. [PMID: 34426578 DOI: 10.1038/s41467-021-25377-x] [Cited by in Crossref: 17] [Cited by in F6Publishing: 21] [Article Influence: 17.0] [Reference Citation Analysis]
11 Rajkumar MS, Jain M, Garg R. Discovery of DNA polymorphisms via whole genome resequencing and their functional relevance in salinity stress response in chickpea. Physiol Plant 2021. [PMID: 34287918 DOI: 10.1111/ppl.13507] [Cited by in Crossref: 2] [Cited by in F6Publishing: 3] [Article Influence: 2.0] [Reference Citation Analysis]
12 Xu Q, Georgiou G, Frölich S, van der Sande M, Veenstra GJC, Zhou H, van Heeringen SJ. ANANSE: an enhancer network-based computational approach for predicting key transcription factors in cell fate determination. Nucleic Acids Res 2021:gkab598. [PMID: 34244796 DOI: 10.1093/nar/gkab598] [Cited by in Crossref: 10] [Cited by in F6Publishing: 11] [Article Influence: 10.0] [Reference Citation Analysis]
13 Li J, Tang M, Li Y, Amos CI, Cheng C. Genetic variants associated mRNA stability in lung.. [DOI: 10.1101/2021.04.29.441922] [Reference Citation Analysis]
14 Tseng CC, Wong MC, Liao WT, Chen CJ, Lee SC, Yen JH, Chang SJ. Genetic Variants in Transcription Factor Binding Sites in Humans: Triggered by Natural Selection and Triggers of Diseases. Int J Mol Sci 2021;22:4187. [PMID: 33919522 DOI: 10.3390/ijms22084187] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
15 Lee JD, Paulo JA, Posey RR, Mugoni V, Kong NR, Cheloni G, Lee YR, Slack FJ, Tenen DG, Clohessy JG, Gygi SP, Pandolfi PP. Dual DNA and protein tagging of open chromatin unveils dynamics of epigenomic landscapes in leukemia. Nat Methods 2021;18:293-302. [PMID: 33649590 DOI: 10.1038/s41592-021-01077-8] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
16 Sadeghi MB, Nakhaee A, Saravani R, Sargazi S. Significant association of LXRβ (NR1H2) polymorphisms (rs28514894, rs2303044) with type 2 diabetes mellitus and laboratory characteristics. J Diabetes Metab Disord 2021;20:261-70. [PMID: 34178836 DOI: 10.1007/s40200-021-00740-3] [Cited by in Crossref: 6] [Cited by in F6Publishing: 2] [Article Influence: 6.0] [Reference Citation Analysis]
17 Undin M, Lockhart PJ, Hills SFK, Castro I. Genetic Rescue and the Plight of Ponui Hybrids. Front Conserv Sci 2021;1:622191. [DOI: 10.3389/fcosc.2020.622191] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 3.0] [Reference Citation Analysis]
18 Zhang L, Li Y, Wu M, Ouyang H, Shi R. The SNP polymorphisms associated with WSSV-resistance of prophenoloxidase in red swamp crayfish (Procambarus clarkii) and its immune response against white spot syndrome virus (WSSV). Aquaculture 2021;530:735787. [DOI: 10.1016/j.aquaculture.2020.735787] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
19 Whitcomb DC. Barriers and Research Priorities for Implementing Precision Medicine. Pancreas 2019;48:1246-9. [PMID: 31688586 DOI: 10.1097/MPA.0000000000001415] [Cited by in Crossref: 7] [Cited by in F6Publishing: 7] [Article Influence: 3.5] [Reference Citation Analysis]
20 Xu S, Feng W, Lu Z, Yu CY, Shao W, Nakshatri H, Reiter JL, Gao H, Chu X, Wang Y, Liu Y. regSNPs-ASB: A Computational Framework for Identifying Allele-Specific Transcription Factor Binding From ATAC-seq Data. Front Bioeng Biotechnol 2020;8:886. [PMID: 32850739 DOI: 10.3389/fbioe.2020.00886] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
21 Xu Q, Georgiou G, Frölich S, van der Sande M, Veenstra GJC, Zhou H, van Heeringen SJ. ANANSE: An enhancer network-based computational approach for predicting key transcription factors in cell fate determination.. [DOI: 10.1101/2020.06.05.135798] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 1.5] [Reference Citation Analysis]
22 Li HT, Liu Y, Liu H, Sun X. Effect for Human Genomic Variation During the BMP4-Induced Conversion From Pluripotent Stem Cells to Trophoblast. Front Genet 2020;11:230. [PMID: 32318089 DOI: 10.3389/fgene.2020.00230] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
23 Johnston AD, Abdulrazak A, Sato H, Maqbool SB, Suzuki M, Greally JM, Simões-pires CA. A cellular stress response induced by the CRISPR/dCas9 activation system is not heritable through cell divisions.. [DOI: 10.1101/2019.12.23.887224] [Reference Citation Analysis]
24 Xu Y, Peng G, Sun M, Li J, Yan W, Tang J, Pan J, Xu Z. Genomic organization of the molt-inhibiting hormone gene in the red swamp crayfish Procambarus clarkii and characterization of single-nucleotide polymorphisms associated with growth. Comp Biochem Physiol B Biochem Mol Biol 2019;237:110334. [PMID: 31472239 DOI: 10.1016/j.cbpb.2019.110334] [Cited by in Crossref: 6] [Cited by in F6Publishing: 7] [Article Influence: 2.0] [Reference Citation Analysis]
25 Johnston AD, Simões-Pires CA, Suzuki M, Greally JM. High-efficiency genomic editing in Epstein-Barr virus-transformed lymphoblastoid B cells using a single-stranded donor oligonucleotide strategy. Commun Biol 2019;2:312. [PMID: 31428700 DOI: 10.1038/s42003-019-0559-3] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.3] [Reference Citation Analysis]
26 [DOI: 10.1101/2020.08.17.254276] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Reference Citation Analysis]