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For: Blank-Giwojna A, Postepska-Igielska A, Grummt I. lncRNA KHPS1 Activates a Poised Enhancer by Triplex-Dependent Recruitment of Epigenomic Regulators. Cell Rep. 2019;26:2904-2915.e4. [PMID: 30865882 DOI: 10.1016/j.celrep.2019.02.059] [Cited by in Crossref: 50] [Cited by in F6Publishing: 40] [Article Influence: 25.0] [Reference Citation Analysis]
Number Citing Articles
1 Luo L, Chen X. Exploring the potential of eRNAs in cancer immunotherapy. Molecular Therapy - Oncolytics 2022;27:197-199. [DOI: 10.1016/j.omto.2022.10.009] [Reference Citation Analysis]
2 Marakulina D, Vorontsov IE, Kulakovskiy IV, Lennartsson A, Drabløs F, Medvedeva Y. EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes. Nucleic Acids Research 2022. [DOI: 10.1093/nar/gkac989] [Reference Citation Analysis]
3 Leisegang MS, Bains JK, Seredinski S, Oo JA, Krause NM, Kuo CC, Günther S, Sentürk Cetin N, Warwick T, Cao C, Boos F, Izquierdo Ponce J, Haydar S, Bednarz R, Valasarajan C, Fuhrmann DC, Preussner J, Looso M, Pullamsetti SS, Schulz MH, Jonker HRA, Richter C, Rezende F, Gilsbach R, Pflüger-Müller B, Wittig I, Grummt I, Ribarska T, Costa IG, Schwalbe H, Brandes RP. HIF1α-AS1 is a DNA:DNA:RNA triplex-forming lncRNA interacting with the HUSH complex. Nat Commun 2022;13:6563. [PMID: 36323673 DOI: 10.1038/s41467-022-34252-2] [Reference Citation Analysis]
4 Khorkova O, Stahl J, Joji A, Volmar C, Zeier Z, Wahlestedt C. Natural antisense transcripts as drug targets. Front Mol Biosci 2022;9:978375. [DOI: 10.3389/fmolb.2022.978375] [Reference Citation Analysis]
5 Ohhata T, Suzuki M, Sakai S, Ota K, Yokota H, Uchida C, Niida H, Kitagawa M. CCIVR facilitates comprehensive identification of cis-natural antisense transcripts with their structural characteristics and expression profiles. Sci Rep 2022;12. [DOI: 10.1038/s41598-022-19782-5] [Reference Citation Analysis]
6 Liu YC, Lin YH, Chi HC, Huang PS, Liao CJ, Liou YS, Lin CC, Yu CJ, Yeh CT, Huang YH, Lin KH. CRNDE acts as an epigenetic modulator of the p300/YY1 complex to promote HCC progression and therapeutic resistance. Clin Epigenetics 2022;14:106. [PMID: 35999564 DOI: 10.1186/s13148-022-01326-3] [Reference Citation Analysis]
7 Duan J, Huang Z, Nice EC, Xie N, Chen M, Huang C. Current advancements and future perspectives of long noncoding RNAs in lipid metabolism and signaling. J Adv Res 2022:S2090-1232(22)00188-6. [PMID: 35973552 DOI: 10.1016/j.jare.2022.08.007] [Cited by in F6Publishing: 1] [Reference Citation Analysis]
8 So KKH, Huang Y, Zhang S, Qiao Y, He L, Li Y, Chen X, Sham MH, Sun H, Wang H. seRNA PAM controls skeletal muscle satellite cell proliferation and aging through trans regulation of Timp2 expression synergistically with Ddx5. Aging Cell. [DOI: 10.1111/acel.13673] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
9 Zhang P, Wu S, He Y, Li X, Zhu Y, Lin X, Chen L, Zhao Y, Niu L, Zhang S, Li X, Zhu L, Shen L. LncRNA-Mediated Adipogenesis in Different Adipocytes. Int J Mol Sci 2022;23:7488. [PMID: 35806493 DOI: 10.3390/ijms23137488] [Reference Citation Analysis]
10 Bezzecchi E, Pagani G, Forte B, Percio S, Zaffaroni N, Dolfini D, Gandellini P. MIR205HG/LEADR Long Noncoding RNA Binds to Primed Proximal Regulatory Regions in Prostate Basal Cells Through a Triplex- and Alu-Mediated Mechanism. Front Cell Dev Biol 2022;10:909097. [DOI: 10.3389/fcell.2022.909097] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
11 Herman AB, Tsitsipatis D, Gorospe M. Integrated lncRNA function upon genomic and epigenomic regulation. Mol Cell 2022;82:2252-66. [PMID: 35714586 DOI: 10.1016/j.molcel.2022.05.027] [Cited by in Crossref: 6] [Cited by in F6Publishing: 8] [Article Influence: 6.0] [Reference Citation Analysis]
12 Winkler L, Jimenez M, Zimmer JT, Williams A, Simon MD, Dimitrova N. Functional elements of the cis-regulatory lincRNA-p21. Cell Rep 2022;39:110687. [PMID: 35443176 DOI: 10.1016/j.celrep.2022.110687] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
13 Napoli S, Munz N, Guidetti F, Bertoni F. Enhancer RNAs (eRNAs) in Cancer: The Jacks of All Trades. Cancers 2022;14:1978. [DOI: 10.3390/cancers14081978] [Cited by in Crossref: 3] [Cited by in F6Publishing: 2] [Article Influence: 3.0] [Reference Citation Analysis]
14 Bencivenga D, Stampone E, Vastante A, Barahmeh M, Della Ragione F, Borriello A. An Unanticipated Modulation of Cyclin-Dependent Kinase Inhibitors: The Role of Long Non-Coding RNAs. Cells 2022;11:1346. [DOI: 10.3390/cells11081346] [Cited by in Crossref: 3] [Cited by in F6Publishing: 3] [Article Influence: 3.0] [Reference Citation Analysis]
15 Kayyar B, Ravikkumar AC, Bhaduri U, Rao MRS. Regulation of Sox8 through lncRNA Mrhl-Mediated Chromatin Looping in Mouse Spermatogonia. Mol Cell Biol 2022;:e0047521. [PMID: 35412350 DOI: 10.1128/mcb.00475-21] [Reference Citation Analysis]
16 Du G, Sun J, Li Z, Zhang Q, Liu W, Yang C, Zhao P, Wang X, Yin Q, Luo Y, Song J, Wen Y, Wang H, Chen CH, Hu G, Zhou Z, Mao X, Liu W, Liu Z, Jiang D, Chen C. A feedforward circuit between KLF5 and lncRNA KPRT4 contributes to basal-like breast cancer. Cancer Lett 2022;:215618. [PMID: 35259457 DOI: 10.1016/j.canlet.2022.215618] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
17 Shen SS, Nanda H, Aliferis C, Langlois RA. Characterization of influenza A virus induced transposons reveals a subgroup of transposons likely possessing the regulatory role as eRNAs. Sci Rep 2022;12:2188. [PMID: 35140280 DOI: 10.1038/s41598-022-06196-6] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
18 Maldotti M, Lauria A, Anselmi F, Molineris I, Tamburrini A, Meng G, Polignano IL, Scrivano MG, Campestre F, Simon LM, Rapelli S, Morandi E, Incarnato D, Oliviero S. The acetyltransferase p300 is recruited in trans to multiple enhancer sites by lncSmad7. Nucleic Acids Res 2022:gkac083. [PMID: 35137201 DOI: 10.1093/nar/gkac083] [Cited by in Crossref: 3] [Cited by in F6Publishing: 4] [Article Influence: 3.0] [Reference Citation Analysis]
19 Mercer TR, Munro T, Mattick JS. The potential of long noncoding RNA therapies. Trends in Pharmacological Sciences 2022. [DOI: 10.1016/j.tips.2022.01.008] [Cited by in Crossref: 6] [Cited by in F6Publishing: 6] [Article Influence: 6.0] [Reference Citation Analysis]
20 Deogharia M, Gurha P. The "guiding" principles of noncoding RNA function. Wiley Interdiscip Rev RNA 2021;:e1704. [PMID: 34856642 DOI: 10.1002/wrna.1704] [Cited by in Crossref: 4] [Cited by in F6Publishing: 5] [Article Influence: 4.0] [Reference Citation Analysis]
21 Abd El Halim HM, Ali A. Long noncoding RNAs: Emerging players regulating innate immune memory in the red flour beetle. Dev Comp Immunol 2022;127:104304. [PMID: 34756931 DOI: 10.1016/j.dci.2021.104304] [Reference Citation Analysis]
22 Choudhury SR, Dutta S, Bhaduri U, Rao MRS. LncRNA Hmrhl regulates expression of cancer related genes in chronic myelogenous leukemia through chromatin association. NAR Cancer 2021;3:zcab042. [PMID: 34734184 DOI: 10.1093/narcan/zcab042] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 1.0] [Reference Citation Analysis]
23 Syed KM, Hon CC. Heterogeneity among enhancer RNAs: origins, consequences and perspectives. Essays Biochem 2021;65:709-21. [PMID: 34414426 DOI: 10.1042/EBC20200064] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 2.0] [Reference Citation Analysis]
24 Leisegang MS, Bains JK, Seredinski S, Oo JA, Krause NM, Kuo C, Günther S, Cetin NS, Warwick T, Cao C, Boos F, Ponce JI, Bednarz R, Valasarajan C, Fuhrmann D, Preussner J, Looso M, Pullamsetti SS, Schulz MH, Rezende F, Gilsbach R, Pflüger-müller B, Wittig I, Grummt I, Ribarska T, Costa IG, Schwalbe H, Brandes RP. HIF1α-AS1 is a DNA:DNA:RNA triplex-forming lncRNA interacting with the HUSH complex.. [DOI: 10.1101/2021.10.11.463905] [Reference Citation Analysis]
25 So KKH, Huang Y, Zhang S, He L, Li Y, Chen X, Zhao Y, Ding Y, Zhou J, Yuan J, Sham MH, Sun H, Wang H. seRNA PAM-1 regulates skeletal muscle satellite cell activation and aging through trans regulation of Timp2 expression synergistically with Ddx5.. [DOI: 10.1101/2021.10.06.463443] [Reference Citation Analysis]
26 Kayyar B, Ravikkumar AC, Bhaduri U, Rao M. Regulation of Sox8 through lncRNA Mrhl mediated chromatin looping in mouse spermatogonia.. [DOI: 10.1101/2021.10.05.463295] [Reference Citation Analysis]
27 Li X, Zou C, Li M, Fang C, Li K, Liu Z, Li C. Transcriptome Analysis of In Vitro Fertilization and Parthenogenesis Activation during Early Embryonic Development in Pigs. Genes (Basel) 2021;12:1461. [PMID: 34680856 DOI: 10.3390/genes12101461] [Reference Citation Analysis]
28 An B, Kameda T, Imamura T. The evolutionary acquisition and mode of functions of promoter-associated non-coding RNAs (pancRNAs) for mammalian development. Essays Biochem 2021:EBC20200143. [PMID: 34328174 DOI: 10.1042/EBC20200143] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
29 Singh N. Role of mammalian long non-coding RNAs in normal and neuro oncological disorders. Genomics 2021;113:3250-73. [PMID: 34302945 DOI: 10.1016/j.ygeno.2021.07.015] [Cited by in Crossref: 1] [Article Influence: 1.0] [Reference Citation Analysis]
30 Alfeghaly C, Sanchez A, Rouget R, Thuillier Q, Igel-Bourguignon V, Marchand V, Branlant C, Motorin Y, Behm-Ansmant I, Maenner S. Implication of repeat insertion domains in the trans-activity of the long non-coding RNA ANRIL. Nucleic Acids Res 2021;49:4954-70. [PMID: 33872355 DOI: 10.1093/nar/gkab245] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 4.0] [Reference Citation Analysis]
31 Zhang S, Li J, Gao H, Tong Y, Li P, Wang Y, Du L, Wang C. lncRNA Profiles Enable Prognosis Prediction and Subtyping for Esophageal Squamous Cell Carcinoma. Front Cell Dev Biol 2021;9:656554. [PMID: 34127945 DOI: 10.3389/fcell.2021.656554] [Cited by in Crossref: 5] [Cited by in F6Publishing: 5] [Article Influence: 5.0] [Reference Citation Analysis]
32 Berjawi M, Bell CG. The Therapeutic Potential of Epigenome-Modifying Drugs in Cardiometabolic Disease. Curr Genet Med Rep 2021;9:22-36. [DOI: 10.1007/s40142-021-00198-y] [Reference Citation Analysis]
33 Pisignano G, Ladomery M. Epigenetic Regulation of Alternative Splicing: How LncRNAs Tailor the Message. Noncoding RNA 2021;7:21. [PMID: 33799493 DOI: 10.3390/ncrna7010021] [Cited by in Crossref: 9] [Cited by in F6Publishing: 10] [Article Influence: 9.0] [Reference Citation Analysis]
34 Yan Q, Sarma K. MapR: A Method for Identifying Native R-Loops Genome Wide. Curr Protoc Mol Biol 2020;130:e113. [PMID: 31943854 DOI: 10.1002/cpmb.113] [Cited by in Crossref: 6] [Cited by in F6Publishing: 9] [Article Influence: 6.0] [Reference Citation Analysis]
35 Statello L, Guo CJ, Chen LL, Huarte M. Gene regulation by long non-coding RNAs and its biological functions. Nat Rev Mol Cell Biol 2021;22:96-118. [PMID: 33353982 DOI: 10.1038/s41580-020-00315-9] [Cited by in Crossref: 929] [Cited by in F6Publishing: 1024] [Article Influence: 464.5] [Reference Citation Analysis]
36 Ramírez-Colmenero A, Oktaba K, Fernandez-Valverde SL. Evolution of Genome-Organizing Long Non-coding RNAs in Metazoans. Front Genet 2020;11:589697. [PMID: 33329735 DOI: 10.3389/fgene.2020.589697] [Cited by in Crossref: 10] [Cited by in F6Publishing: 10] [Article Influence: 5.0] [Reference Citation Analysis]
37 Zhao S, Zhang X, Chen S, Zhang S. Natural antisense transcripts in the biological hallmarks of cancer: powerful regulators hidden in the dark. J Exp Clin Cancer Res 2020;39:187. [PMID: 32928281 DOI: 10.1186/s13046-020-01700-0] [Cited by in Crossref: 14] [Cited by in F6Publishing: 16] [Article Influence: 7.0] [Reference Citation Analysis]
38 Mercatelli N, Palombo R, Paronetto MP. Emerging Contribution of PancRNAs in Cancer. Cancers (Basel) 2020;12:E2035. [PMID: 32722129 DOI: 10.3390/cancers12082035] [Cited by in Crossref: 1] [Cited by in F6Publishing: 2] [Article Influence: 0.5] [Reference Citation Analysis]
39 Postepska-igielska A, Blank-giwojna A, Grummt I. Analysis of RNA–DNA Triplex Structures In Vitro and In Vivo. In: Ørom UAV, editor. RNA-Chromatin Interactions. New York: Springer US; 2020. pp. 229-46. [DOI: 10.1007/978-1-0716-0680-3_16] [Cited by in Crossref: 2] [Cited by in F6Publishing: 2] [Article Influence: 1.0] [Reference Citation Analysis]
40 Khelifi G, Hussein SMI. A New View of Genome Organization Through RNA Directed Interactions. Front Cell Dev Biol 2020;8:517. [PMID: 32760716 DOI: 10.3389/fcell.2020.00517] [Cited by in Crossref: 4] [Cited by in F6Publishing: 4] [Article Influence: 2.0] [Reference Citation Analysis]
41 Herbert A. ALU non-B-DNA conformations, flipons, binary codes and evolution. R Soc Open Sci 2020;7:200222. [PMID: 32742689 DOI: 10.1098/rsos.200222] [Cited by in Crossref: 13] [Cited by in F6Publishing: 14] [Article Influence: 6.5] [Reference Citation Analysis]
42 Li G, Xie M, Huang Z, Li H, Li P, Zhang Z, Ding Y, Jia Z, Yang J. Overexpression of antisense long non‑coding RNA ZNF710‑AS1‑202 promotes cell proliferation and inhibits apoptosis of clear cell renal cell carcinoma via regulation of ZNF710 expression. Mol Med Rep 2020;21:2502-12. [PMID: 32236626 DOI: 10.3892/mmr.2020.11032] [Cited by in Crossref: 1] [Cited by in F6Publishing: 1] [Article Influence: 0.5] [Reference Citation Analysis]
43 Dobersch S, Rubio K, Singh I, Günther S, Graumann J, Cordero J, Castillo-negrete R, Huynh MB, Mehta A, Braubach P, Cabrera-fuentes H, Bernhagen J, Chao C, Bellusci S, Günther A, Preissner KT, Dobreva G, Wygrecka M, Braun T, Papy-garcia D, Barreto G. Positioning of nucleosomes containing γ-H2AX precedes active DNA demethylation and transcription initiation.. [DOI: 10.1101/2020.03.06.980912] [Reference Citation Analysis]
44 Coe EA, Tan JY, Shapiro M, Louphrasitthiphol P, Bassett AR, Marques AC, Goding CR, Vance KW. The MITF-SOX10 regulated long non-coding RNA DIRC3 is a melanoma tumour suppressor. PLoS Genet 2019;15:e1008501. [PMID: 31881017 DOI: 10.1371/journal.pgen.1008501] [Cited by in Crossref: 36] [Cited by in F6Publishing: 38] [Article Influence: 12.0] [Reference Citation Analysis]
45 Sauvageau M. Diverging RNPs: Toward Understanding lncRNA-Protein Interactions and Functions. Adv Exp Med Biol 2019;1203:285-312. [PMID: 31811638 DOI: 10.1007/978-3-030-31434-7_10] [Cited by in Crossref: 8] [Cited by in F6Publishing: 4] [Article Influence: 2.7] [Reference Citation Analysis]
46 Mishra K, Kanduri C. Understanding Long Noncoding RNA and Chromatin Interactions: What We Know So Far. Noncoding RNA 2019;5:E54. [PMID: 31817041 DOI: 10.3390/ncrna5040054] [Cited by in Crossref: 33] [Cited by in F6Publishing: 44] [Article Influence: 11.0] [Reference Citation Analysis]
47 Dai X, Kaushik AC, Zhang J. The Emerging Role of Major Regulatory RNAs in Cancer Control. Front Oncol. 2019;9:920. [PMID: 31608229 DOI: 10.3389/fonc.2019.00920] [Cited by in Crossref: 29] [Cited by in F6Publishing: 30] [Article Influence: 9.7] [Reference Citation Analysis]
48 Wang W, Xie Y, Chen F, Liu X, Zhong LL, Wang HQ, Li QC. LncRNA MEG3 acts a biomarker and regulates cell functions by targeting ADAR1 in colorectal cancer. World J Gastroenterol 2019; 25(29): 3972-3984 [PMID: 31413531 DOI: 10.3748/wjg.v25.i29.3972] [Cited by in CrossRef: 27] [Cited by in F6Publishing: 30] [Article Influence: 9.0] [Reference Citation Analysis]
49 Wang W, Xie Y, Chen F, Liu X, Zhong L, Wang H, Li Q. LncRNA MEG3 acts a biomarker and regulates cell functions by targeting ADAR1 in colorectal cancer. WJG 2019;25:0-0. [DOI: 10.3748/wjg.v25.i29.0000] [Reference Citation Analysis]
50 Zhang P, Wu W, Chen Q, Chen M. Non-Coding RNAs and their Integrated Networks. J Integr Bioinform 2019;16:/j/jib. [PMID: 31301674 DOI: 10.1515/jib-2019-0027] [Cited by in Crossref: 164] [Cited by in F6Publishing: 181] [Article Influence: 54.7] [Reference Citation Analysis]
51 Coe EA, Tan JY, Shapiro M, Louphrasitthiphol P, Bassett AR, Marques AC, Goding CR, Vance KW. The MITF-SOX10 regulated long non-coding RNA DIRC3 is a melanoma tumour suppressor.. [DOI: 10.1101/591065] [Reference Citation Analysis]