Gene testing for osteonecrosis of the femoral head in systemic lupus erythematosus using targeted next-generation sequencing: A pilot study

Table 1 Genotype distribution of single nucleotide variants

Sample	Het_SNV	Hom_SNV	Novel_SNV	Het_InDel	Hom_InDel	Novel_InDel
G1	25	22	2	4	0	7
G2	29	11	0	7	0	7
G3	21	9	1	5	0	7
G4	9	14	1	4	0	7
G5	17	12	2	6	0	5
G6	26	15	1	3	0	7
G7	14	24	1	4	0	7
G8	14	11	2	4	0	7
G9	25	21	0	3	0	5
G10	21	9	1	4	0	6
G11	19	25	0	5	1	6
G12	30	12	0	4	0	4
G13	17	14	1	7	0	7
G14	26	12	0	3	0	5
G15	17	14	0	4	0	6
G16	31	11	4	4	0	8
G17	16	19	1	7	0	6
G18	18	24	1	7	0	7
G19	18	22	2	5	0	4
G20	22	13	1	5	0	6
G21	5	17	4	4	0	8
G22	12	11	2	5	0	6
G23	20	26	1	3	1	5
G24	31	14	2	5	0	6
G25	19	13	2	5	0	7
G26	16	20	1	6	0	4
G27	6	16	2	4	0	6
G28	14	24	1	3	0	4
G29	45	8	0	6	0	6
G30	22	13	1	7	0	6
G31	20	23	3	5	0	6
G32	31	15	0	6	0	5
G33	23	13	0	4	0	4
G34	31	7	2	5	0	6
G35	17	13	2	6	0	6
G36	19	10	0	4	0	5
G37	19	25	1	5	1	7
G38	26	20	1	6	0	6
G39	26	13	2	4	0	8
G40	21	10	1	5	0	6
G41	30	12	1	6	0	7
G42	26	17	1	4	0	7
G43	31	14	1	7	0	7
G44	18	13	0	4	0	6
G45	16	21	0	6	0	7
G46	5	17	4	4	0	6
G47	19	25	0	4	1	6
G48	21	9	2	5	0	4
G49	9	14	0	5	0	4

Het_SNV: Heterozygous genotype SNP (annotation by dbSNP); Hom_SNV: Homozygous genotype SNP (annotation by dbSNP); Novel_SNV: Novel SNV (no annotation by dbSNP); Het_InDel: Heterozygous genotype insertion-deletion (InDel) (annotation by dbSNP); Hom_InDel: Homozygous genotype InDel (annotation by dbSNP); Novel_InDel: Novel InDel (no annotation by dbSNP).