Re-analysis of hepatitis B virus integration sites reveals potential new loci associated with oncogenesis in hepatocellular carcinoma

doi:10.5501/wjv.v12.i3.209

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World Journal of Virology

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2220-3249

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Virol. Jun 25, 2023; 12(3): 209-220
Published online Jun 25, 2023. doi: 10.5501/wjv.v12.i3.209

Table 1 Comparison of hepatitis B virus integration breakpoints among reference genomes

	GRCh38	T2T-CHM13	Original
Tumor
Number of breakpoints	2439	2487	3486
Number of samples	357	355	328
Non-tumor
Number of breakpoints	2759	2874	739
Number of samples	288	288	160

Citation: Kojima R, Nakamoto S, Kogure T, Ma Y, Ogawa K, Iwanaga T, Qiang N, Ao J, Nakagawa R, Muroyama R, Nakamura M, Chiba T, Kato J, Kato N. Re-analysis of hepatitis B virus integration sites reveals potential new loci associated with oncogenesis in hepatocellular carcinoma. World J Virol 2023; 12(3): 209-220
URL: https://www.wjgnet.com/2220-3249/full/v12/i3/209.htm
DOI: https://dx.doi.org/10.5501/wjv.v12.i3.209