Gut microbiome profiling and colorectal cancer in African Americans and Caucasian Americans

Table 3 Abundance of microbiota in colonic effluents from African Americans and Caucasian Americans (green, black, blue and red color represent phylum, family, genus and species, respectively)

Phylum	Family	Genus	Species	AA (%)	CA (%)
Bacteroidetes				70.74	43.17
	Bacteroidaceae			56.75	29.94
		Bacteroides		56.8	29.9
			Unclassified	30.3	17.8
			Caccae	13.6	5.5
			Massiliensis	6.7	1.7
			Uniformis	2.8	1.5
			Fragilis	1	2
	Rikenellaceae			6.44	5.47
		Allistipes	Putredinis	6.4 (3.9)	5.4 (3.0)
	Porphymonadaceae			6.4	6.95
		Parabacteroides	Distasonis	4.9 (3.4)	3.2 (1.0)
		Barnesiella	Intestinihominis	0.16 (0.16)	2.7 (2.6)
	Prevotellaceae			1.9	1.1
		Paraprevotella	Clara	1.0 (0.9)	0.6 (0.6)
Firmicutes				26.74	36.25
	Ruminococaceae			11.35	15.7
		Faecalibacterium	Prausinitzii	4.5 (4.5)	3.1 (3.1)
		Unclassified	Unclassified	2.5 (2.5)	2.9 (3.0)
		Gemmiger	Formicilis	1.9 (1.6)	6.1 (6.0)
		Clostridium IV	Unclassified	0.3 (0.3)	1.5 (1.5)
	Lachnospiraceae			11.19	13.7
		Ruminococcus 2	Unclassified	3.4 (3.4)	4.7 (4.7)
		Clostridium XIVa	Unclassified	2.05 (2.0)	1.03 (1.0)
		Unclassified	Unclassified	1.6 (1.7)	2.4 (2.4)
		Blautica	Producta	0.22 (0.06)	1.2 (0.0)
		Dorea	Unclassified	1.8 (0.8)	1.3 (1.0)
		Roseburia	Unclassified	0.5 (0.3)	1.3 (0.9)
	Steptococaccae	Steptococcus	Faecium	0.9 (0.9) (0.8)	3.2 (3.2) (3.2)
	Acidaminococcaceae	Phascolarctobacterium	Unclassified	1.8 (1.9) (1.4)	0.9 (0.9) (1.3)
	Peptostreptococcaceae	Clostridium XI	Unclassified	0.02 (0.02) (0.02)	0.01 (0.008) (0.008)
	Veillonellaceae	Veillonella	Atypica	0.81 (0.03) (0.03)	1.27 (0.02) (0.02)
			Unclassified	0.6 (0.6)	0.5 (0.5)
		Dialister	Invisus	0.002 (0.0)	0.68 (0.65)
	Lactobacillaceae	Lactobacillus	Sanfrancisecnsis	0.035 (0.02) (0.004)	0.01 (0.01) (0.001)
Proteobacteria				2.02	5.9
	Desulfovibrionaceae	Biophila	Unclassified	0.16 (0.12) (0.12)	0.07 (0.07) (0.01)
	Sutterrellaceae	Parasuttrella	Excrementihomis	0.50 (0.76) (0.4)	0.24 (1.9) (0.1)
	Pasteurellaceae	Haemophilus	Parainfluenza	0.57 (0.9) (0.4)	1.98 (1.9) (1.9)
	Enterobacteiaceae	Escherichia/Shigella	Unclassified	0.92 (0.8) (0.9)	3.14 (3.1) (3.1)
		Klebsiella	Unclassified	(0.09) (0.02)	0.003 (0.01)
Fusobacteria				0.18	0.58
	Fusobactereaceae	Fusobacterium	Unclassified	0.18 (0.15) (0.15)	0.58 (0.6) (0.6)
Verrucomicrobia				0.04	1.9
	Verrucomicrobiaceae	Akkermansia	Muciniphila	0.04 (0.04)	1.9 (1.9)
Bacteria-unclassified	Unclassified	Unclassified	Unclassified	0	5.4 (5.4) (5.4)
Unclassified-unclassified	Unclassified	Unclassified	Unclassified	0	4.6 (4.6) (4.6)

AA: African Americans; CA: Caucasian Americans.