Identification of host miRNAs that may limit human rhinovirus replication

doi:10.4331/wjbc.v5.i4.437

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Nov 26, 2014 (publication date) through Nov 28, 2024

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World Journal of Biological Chemistry

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1949-8454

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Biol Chem. Nov 26, 2014; 5(4): 437-456
Published online Nov 26, 2014. doi: 10.4331/wjbc.v5.i4.437

Table 5 PITA predictions on human rhinovirus-1B

Virus	miR	Site start	Site end	dG duplex	ddG		Alignment
HRV-1B	155	2901	2893	-15.12	-11.87	Site:	UCUUUACCAUUUCUUAGCAUUGCG
							\|\| \|\| \| \| \| \|\| \| \| \|:
						miR:	UGGGGAUAGU-GCUAAUCGUAAUU
HRV-1B	128	1562	1554	-16.4	-11.11	Site:	CUAACAUAAGACCAAUCACUGUAUCA
							\| \| \| \| \| \| \|
						miR:	UUUCUCUGGCCAAGUGACACU
HRV-1B	106b	2276	2268	-17.2	-10.9	Site:	GUUUCUGCAUGUAAGGACUUUUG
							\| \| \| \|\| \| \| \| \| \|
						miR:	UAGACGUGACAGUCGUGAAAU

The cut off was set at -10 (ddG). HRV: Human rhinovirus.

Citation: Bondanese VP, Francisco-Garcia A, Bedke N, Davies DE, Sanchez-Elsner T. Identification of host miRNAs that may limit human rhinovirus replication. World J Biol Chem 2014; 5(4): 437-456
URL: https://www.wjgnet.com/1949-8454/full/v5/i4/437.htm
DOI: https://dx.doi.org/10.4331/wjbc.v5.i4.437