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©The Author(s) 2024.
World J Gastrointest Oncol. Sep 15, 2024; 16(9): 3913-3931
Published online Sep 15, 2024. doi: 10.4251/wjgo.v16.i9.3913
Published online Sep 15, 2024. doi: 10.4251/wjgo.v16.i9.3913
Table 6 Protein tyrosine phosphatase non-receptor 2 oncogenic pathway parameters in Gene Set Enrichment Analysis
| GeneSet | NES | NOM P value | FDR Q value |
| KEGG_OOCYTE_MEIOSIS | 2.15 | 0.000 | 0.000 |
| PROGESTERONE_MEDIATED_OOCYTE_MATURATION | 2.09 | 0.000 | 0.004 |
| PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM | 2.03 | 0.000 | 0.006 |
| INOSITOL_PHOSPHATE_METABOLISM | 2.03 | 0.000 | 0.005 |
| NEUROTROPHIN_SIGNALING_PATHWAY | 2.02 | 0.000 | 0.005 |
| PANCREATIC_CANCER | 2.02 | 0.000 | 0.004 |
| PATHWAYS_IN_CANCER | 2.01 | 0.000 | 0.003 |
| REGULATION_OF_AUTOPHAGY | 2.01 | 0.000 | 0.003 |
| ENDOCYTOSIS | 2.00 | 0.000 | 0.004 |
| UBIQUITIN_MEDIATED_PROTEOLYSIS | 1.99 | 0.000 | 0.004 |
| NOTCH_SIGNALING_PATHWAY | 1.99 | 0.000 | 0.003 |
| REGULATION_OF_ACTIN_CYTOSKELETON | 1.98 | 0.000 | 0.003 |
| CELL_CYCLE | 1.97 | 0.000 | 0.004 |
| APOPTOSIS | 1.97 | 0.000 | 0.003 |
| FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS | 1.97 | 0.000 | 0.003 |
| JAK_STAT_SIGNALING_PATHWAY | 1.97 | 0.002 | 0.003 |
| MAPK_SIGNALING_PATHWAY | 1.96 | 0.000 | 0.003 |
| SPLICEOSOME | 1.96 | 0.000 | 0.003 |
| SMALL_CELL_LUNG_CANCER | 1.96 | 0.000 | 0.003 |
| INSULIN_SIGNALING_PATHWAY | 1.95 | 0.000 | 0.003 |
- Citation: Li HY, Jing YM, Shen X, Tang MY, Shen HH, Li XW, Wang ZS, Su F. Protein tyrosine phosphatase non-receptor II: A possible biomarker of poor prognosis and mediator of immune evasion in hepatocellular carcinoma. World J Gastrointest Oncol 2024; 16(9): 3913-3931
- URL: https://www.wjgnet.com/1948-5204/full/v16/i9/3913.htm
- DOI: https://dx.doi.org/10.4251/wjgo.v16.i9.3913