Basic Study
Copyright ©The Author(s) 2019.
World J Gastrointest Oncol. Mar 15, 2019; 11(3): 195-207
Published online Mar 15, 2019. doi: 10.4251/wjgo.v11.i3.195
Table 2 Top 10 of VHDJH rearrangement patterns in colon cancer and normal epithelial cells
Cancer
Normal
VDJ%VDJ%
Patient-1hIGHV3-13hIGHD3-9hIGHJ666.84%hIGHV1-8hIGHD7-27hIGHJ427.25%
hIGHV3-30hIGHD6-19hIGHJ615.81%hIGHV3-74hIGHD6-19hIGHJ424.71%
hIGHV3-30-3hIGHD2-8hIGHJ44.90%hIGHV3-23hIGHD2-21hIGHJ518.58%
hIGHV5-51hIGHD3-16hIGHJ43.69%hIGHV1-8hIGHD1-7hIGHJ36.31%
hIGHV3-23hIGHD6-13hIGHJ43.58%hIGHV5-51hIGHD3-16hIGHJ45.00%
hIGHV3-7hIGHD3-9hIGHJ61.00%hIGHV3-23hIGHD3-22hIGHJ62.92%
hIGHV3-33hIGHD6-19hIGHJ60.79%hIGHV3-74hIGHD4-17hIGHJ42.20%
hIGHV3-13hIGHD6-13hIGHJ60.53%hIGHV3-21hIGHD2-15hIGHJ51.19%
hIGHV3-30hIGHD2-8hIGHJ40.37%hIGHV3-74hIGHD2-21hIGHJ51.17%
hIGHV3-64hIGHD6-19hIGHJ60.26%hIGHV3-23hIGHD6-19hIGHJ41.06%
Patient-2hIGHV1-58hIGHD3-22hIGHJ443.86%hIGHV1-18hIGHD4-17hIGHJ424.34%
hIGHV1-46hIGHD3-9hIGHJ418.00%hIGHV3-11hIGHD5-5hIGHJ210.95%
hIGHV3-43hIGHD3-22hIGHJ410.20%hIGHV3-74hIGHD6-13hIGHJ110.28%
hIGHV3-23hIGHD3-9hIGHJ46.28%hIGHV3-9hIGHD6-19hIGHJ410.02%
hIGHV1-69hIGHD4-17hIGHJ35.31%hIGHV3-23hIGHD3-10hIGHJ46.67%
hIGHV1-69hIGHD2-15hIGHJ53.98%hIGHV4-4hIGHD3-22hIGHJ45.92%
hIGHV1-2hIGHD5-5hIGHJ42.77%hIGHV3-15hIGHD3-10hIGHJ43.87%
hIGHV1-58hIGHD5-5hIGHJ41.08%hIGHV3-49hIGHD6-19hIGHJ42.88%
hIGHV3-53hIGHD6-6hIGHJ41.01%hIGHV4-59hIGHD3-22hIGHJ42.34%
hIGHV1-3hIGHD7-27hIGHJ60.61%hIGHV3-53hIGHD6-19hIGHJ42.14%
Patient-3hIGHV3-23hIGHD4-4hIGHJ511.63%hIGHV1-18hIGHD4-17hIGHJ424.71%
hIGHV7-4-1hIGHD1-26hIGHJ611.28%hIGHV3-9hIGHD6-19hIGHJ411.82%
hIGHV3-74hIGHD6-6hIGHJ511.16%hIGHV3-11hIGHD5-5hIGHJ210.21%
hIGHV3-23hIGHD3-16hIGHJ56.15%hIGHV3-74hIGHD6-13hIGHJ19.42%
hIGHV3-48hIGHD4-4hIGHJ45.29%hIGHV3-23hIGHD3-10hIGHJ46.20%
hIGHV2-5hIGHD5-12hIGHJ45.16%hIGHV4-4hIGHD3-22hIGHJ45.93%
hIGHV1-69hIGHD5-5hIGHJ44.83%hIGHV3-15hIGHD3-10hIGHJ44.39%
hIGHV3-23hIGHD3-22hIGHJ54.18%hIGHV4-59hIGHD3-22hIGHJ42.78%
hIGHV3-53hIGHD5-12hIGHJ42.14%hIGHV3-49hIGHD6-19hIGHJ42.50%
hIGHV3-11hIGHD2-15hIGHJ42.07%hIGHV3-53hIGHD6-19hIGHJ42.06%
Patient-4hIGHV3-7hIGHD3-22hIGHJ557.78%hIGHV3-74hIGHD2-8hIGHJ588.00%
hIGHV3-48hIGHD3-22hIGHJ513.33%hIGHV1-8hIGHD7-27hIGHJ44.00%
hIGHV1-58hIGHD3-22hIGHJ411.11%hIGHV3-74hIGHD6-19hIGHJ42.00%
hIGHV3-43hIGHD3-22hIGHJ46.67%hIGHV3-74hIGHD2-21hIGHJ52.00%
hIGHV3-23hIGHD3-9hIGHJ44.44%hIGHV3-23hIGHD2-21hIGHJ52.00%
hIHGV3-74hIGHD2-8hIGHJ52.22%hIGHV3-74hIGHD5-5hIGHJ62.00%
hIGHV3-21hIGHD3-22hIGHJ52.22%N/A
hIHGV1-46-hIGHJ42.22%N/A
Patient-5hIHGV3-7hIHGD3-22hIHGJ565.96%hIGHV3-7hIGHD3-22hIGHJ560.00%
hIHGV3-21hIHGD3-22hIHGJ54.26%hIGHV1-8hIGHD7-27hIGHJ412.31%
hIHGV3-74hIHGD6-6hIHGJ54.26%hIGHV1-8hIGHD1-7hIGHJ36.15%
hIHGV7-4-1hIHGD1-26hIHGJ64.26%hIGHV3-23hIGHD2-21hIGHJ54.62%
hIHGV3-48hIHGD3-22hIHGJ54.26%hIGHV3-74hIGHD6-19hIGHJ44.62%
hIHGV3-48hIHGD4-4hIHGJ44.26%hIGHV3-74hIGHD2-8hIGHJ43.08%
hIHGV3-11hIHGD2-15hIHGJ42.13%hIGHV5-51hIGHD3-16hIGHJ41.54%
hIHGV3-33hIHGD3-22hIHGJ52.13%hIGHV3-9hIGHD2-21hIGHJ51.54%
hIHGV3-23hIHGD3-22hIHGJ52.13%hIGHV3-33hIGHD3-22hIGHJ51.54%
hIHGV3-72hIHGD1-7hIHGJ62.13%hIGHV3-74hIGHD6-25hIGHJ41.54%
Patient-6hIGHV1-8hIGHD6-13hIGHJ544.32%N/A
hIGHV4-61hIGHD3-16hIGHJ616.60%
hIGHV1-8hIGHD3-10hIGHJ514.34%
hIGHV3-23hIGHD3-22hIGHJ311.74%
hIGHV1-8hIGHD7-27hIGHJ46.00%
hIGHV3-23hIGHD2-21hIGHJ54.57%
hIGHV3-74hIGHD6-19hIGHJ40.96%
hIGHV4-61hIGHD2-21hIGHJ60.17%
hIGHV3-74hIGHD3-22hIGHJ30.13%
hIGHV1-8hIGHD3-16hIGHJ50.13%
Patient-7hIGHV3-7hIGHD3-22hIGHJ580.95%N/A
hIGHV3-21hIGHD3-22hIGHJ51.28%
hIGHV3-33hIGHD3-22hIGHJ50.92%
hIGHV3-23hIGHD4-4hIGHJ50.92%
hIGHV7-4-1hIGHD1-26hIGHJ60.92%
hIGHV3-23hIGHD3-22hIGHJ50.73%
hIGHV3-48hIGHD3-22hIGHJ50.73%
hIGHV2-5hIGHD5-12hIGHJ40.73%
hIGHV3-48hIGHD4-4hIGHJ40.55%
hIGHV3-48hIGHD3-22hIGHJ50.55%