Copyright
©The Author(s) 2016.
World J Stem Cells. Nov 26, 2016; 8(11): 384-395
Published online Nov 26, 2016. doi: 10.4252/wjsc.v8.i11.384
Published online Nov 26, 2016. doi: 10.4252/wjsc.v8.i11.384
Table 1 3D complex structures of β-catenin (CTNNB1) and interacting proteins
pdb_id | β-catenin (CTNNB1) | Proteins that interact with β-catenin | |||||||
ChainID | Length | UniProtID | Molecule | ChainID | Length | UniProtID | Contact protein name | Regulation of gene expression in GC cells compared to MSCs | |
1th1 | B | 513 | CTNB1_HUMAN | APC | D | 54 | APC_HUMAN | Adenomatous polyposis coli protein | Not changed/- |
1qz7 | A | 524 | CTNB1_HUMAN | AXIN1 | B | 17 | AXN_XENLA | Axin-1 | - |
3sl9 | B | 165 | CTNB1_HUMAN | BCL9 | D | 23 | BCL9_HUMAN | B-cell CLL/lymphoma 9 protein | - |
1i7w | C | 509 | CTNB1_MOUSE | CDH1 | D | 60 | CADH1_MOUSE | Cadherin-1 | Up-regulated |
1m1e | A | 512 | CTNB1_MOUSE | CTNNBIP1 | B | 65 | CNBP1_HUMAN | Beta-catenin-interacting protein 1 | - |
3oux | A | 503 | CTNB1_MOUSE | LEF1 | B | 47 | LEF1_MOUSE | Lymphoid enhancer-binding factor 1 | Up-regulated |
3tx7 | A | 504 | CTNB1_HUMAN | NR5A2 | B | 218 | NR5A2_HUMAN | Nuclear receptor subfamily 5 group A member 2 | - |
1g3j | A | 439 | CTNB1_HUMAN | TCF7L1 | B | 34 | T7L1A_XENLA | Transcription factor 7-like 1-A | - |
1jdh | A | 508 | CTNB1_HUMAN | TCF7L2 | B | 38 | TF7L2_HUMAN | Transcription factor 7-like 2 | Up-regulated |
1dow | B | 32 | CTNB1_MOUSE | CTNNA1 | A | 205 | CTNA1_MOUSE | Catenin alpha-1 | Not changed/- |
4ons | D | 56 | CTNB1_MOUSE | CTNNA2 | C | 230 | CTNA2_MOUSE | Catenin alpha-2 | - |
- Citation: Tanabe S, Kawabata T, Aoyagi K, Yokozaki H, Sasaki H. Gene expression and pathway analysis of CTNNB1 in cancer and stem cells. World J Stem Cells 2016; 8(11): 384-395
- URL: https://www.wjgnet.com/1948-0210/full/v8/i11/384.htm
- DOI: https://dx.doi.org/10.4252/wjsc.v8.i11.384