Enhanced hepatic differentiation in the subpopulation of human amniotic stem cells under 3D multicellular microenvironment

doi:10.4252/wjsc.v11.i9.705

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Sep 26, 2019 (publication date) through Jul 22, 2024

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World Journal of Stem Cells

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1948-0210

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Stem Cells. Sep 26, 2019; 11(9): 705-721
Published online Sep 26, 2019. doi: 10.4252/wjsc.v11.i9.705

Table 2 RNAseq data sources used in the bioinformatics analysis

Sample name	SRA number	Instrument	Memo	Ref.
AEC-1	SRR9643783	Illumina HiSeq 2500	Primary AEC
AEC-2	SRR9643784	Illumina HiSeq 2500	Primary AEC
MSC-1	SRR6431450	Illumina HiSeq 2000		[44]
MSC-2	SRR6431451	Illumina HiSeq 2000		[44]
hESC-1	SRR4241924	Illumina HiSeq 4000	H9	[45]
hESC-2	SRR4241926	Illumina HiSeq 4000	H9	[45]
NiPS-1	SRR7592168	Illumina HiSeq 2500	Normal human iPSC	[46]
NiPS-2	SRR7592169	Illumina HiSeq 2500	Normal human iPSC	[46]
DE-1	SRR771468	Illumina HiSeq 2000	Definitive endoderm induced from H9	[47]
DE-2	SRR771469	Illumina HiSeq 2000	Definitive endoderm induced from H9	[47]
hiHep-1	SRR5974291	Illumina HiSeq 2000	Umbilical cord fibroblast derived hepatocyte-like like cell	[8]
hiHep-2	SRR5974292	Illumina HiSeq 2000	Umbilical cord fibroblast derived hepatocyte-like cell	[8]
iPSCHLC-1	SRR5974295	Illumina HiSeq 2500	iPSC-derived Hepatocyte-like cell	[8]
iPSCHLC-2	SRR5974296	Illumina HiSeq 2500	iPSC-derived hepatocyte-like cell	[8]
Hepa-1	SRR6176953	Illumina HiSeq 2500	Hepatocyte from clinical sample of adult	[48]
Hepa-2	SRR6176948	Illumina HiSeq 2500	Hepatocyte from clinical sample of adult	[48]
Hepa-3	SRR5974298	Illumina HiSeq 2000	Primary human hepatocyte 2 d	[8]
Hepa-4	SRR5974299	Illumina HiSeq 2000	Primary human hepatocyte 4 d	[8]

Citation: Furuya K, Zheng YW, Sako D, Iwasaki K, Zheng DX, Ge JY, Liu LP, Furuta T, Akimoto K, Yagi H, Hamada H, Isoda H, Oda T, Ohkohchi N. Enhanced hepatic differentiation in the subpopulation of human amniotic stem cells under 3D multicellular microenvironment. World J Stem Cells 2019; 11(9): 705-721
URL: https://www.wjgnet.com/1948-0210/full/v11/i9/705.htm
DOI: https://dx.doi.org/10.4252/wjsc.v11.i9.705