Full-length genome of wild-type hepatitis A virus (DL3) isolated in China

Table 3 Amino acid identities of full-length genomes between DL3 and reference isolates

	Numbers of amino acid differences/identity
	AH1	AH2	AH3	FH1	FH2	FH3	GBM	LA	HM175	MBB	SLF88
Full	21/99.1	18/99.2	36/98.4	28/98.7	21/99.1	18/99.2	36/98.4	34/98.5	35/98.4	49/97.8	72/96.8
VP4	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	1/95.7	2/91.3
VP2	0	0	0	1/99.5	0	0	1/99.5	0	2/99.1	2/99.1	1/99.5
VP3	1/99.6	1/99.6	1/99.6	2/99.2	1/99.6	1/99.6	1/99.6	1/99.6	2/99.2	2/99.2	4/98.4
VP1	0	0	0	1/99.6	0	1/99.6	2/99.3	13/95.3	1/99.6	2/99.3	2/99.3
2A	1/98.6	1/98.6	1/98.6	1/98.6	1/98.6	0	1/98.6	0	1/98.6	2/97.2	1/98.6
2B	2/99.2	2/99.2	3/98.8	5/98.0	5/98.0	5/98.0	3/98.8	4/98.4	4/98.4	6/97.6	6/97.6
2C	6/98.2	5/98.5	4/98.8	6/98.2	5/98.5	4/98.8	7/97.9	5/98.5	11/96.7	17/94.9	14/95.8
3A	0	1/98.6	1/98.6	1/98.6	0	0	5/93.2	1/98.6	1 /98.6	3/95.9	1/98.6
3B	0	0	0	0	0	0	1/95.7	0	0	0	0
3C	2/99.1	2/99.1	3/98.6	2/99.1	2/99.1	2/99.1	3/98.6	2/99.1	2/99.1	2/99.1	8/96.3
3D	8/98.4	5/99.0	22/95.5	8/98.4	6/98.8	4/99.2	11/97.8	7/98.6	10/98.0	12/97.5	33/93.3