Full-length genome of wild-type hepatitis A virus (DL3) isolated in China

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Mar 15, 2003 (publication date) through Feb 21, 2025

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

Viral Hepatitis

World J Gastroenterol. Mar 15, 2003; 9(3): 499-504
Published online Mar 15, 2003. doi: 10.3748/wjg.v9.i3.499

Table 2 Nucleotide identities of full-length genomes between DL3 and reference isolates

	Numbers of nucleotide differences/identity
	AH1	AH2	AH3	FH1	FH2	FH3	GBM	LA	HM175	MBB	SLF88
Full	185/97.5	263/96.5	307/95.9	282/96.2	200/97.3	199/97.3	323/95.7	344/95.4	642/91.4	659/91.2	1066/85.7
5’NTR	15/98.0	29/96.0	25/96.6	16/97.8	13/98.2	13/98.2	18/97.4	14/98.1	38/94.8	50/93.1	84/88.5
VP4	1/98.6	2/97.1	4/94.2	2/97.1	2/97.1	2/97.1	3/95.7	2/97.1	7/89.9	7/89.9	8/88.4
VP2	15/97.7	25/96.2	28/95.8	24/96.4	18/97.3	24/96.4	39/94.1	28/95.8	58/91.3	58/91.3	98/85.3
VP3	15/98.0	25/96.6	28/96.2	27/96.3	13/98.2	23/96.9	35/95.3	40/94.6	67/90.9	63/91.5	114/84.6
VP1	23/97.2	27/96.7	25/97.0	23/97.2	22/97.3	13/98.4	30/96.4	44/94.6	76/90.8	78/90.5	124/84.9
2A	5/97.7	10/95.3	11/94.8	9/95.8	3/98.6	9/95.8	9/95.8	12/94.4	17/92.0	14/93.4	27/87.3
2B	13/98.3	26/96.5	29/96.1	46/93.9	18/97.6	28/96.3	33/95.6	37/95.1	75/90.0	73/90.3	99/86.9
2C	30/97.0	42/95.8	42/95.8	44/95.6	35/96.5	35/96.5	52/94.8	55/94.5	114/88.7	120/88.1	152/84.9
3A	1/99.5	4/98.2	4/98.2	9/95.9	4/98.2	3/98.6	13/94.1	8/96.4	14/93.7	18/91.9	23/89.6
3B	1/98.6	1/98.6	2/97.1	3/95.7	3/95.7	0	2/97.1	3/95.7	6/91.3	7/89.9	12/82.6
3C	14/97.9	20/97.0	24/96.3	25/96.2	16/97.6	21/96.8	30/95.4	27/95.9	56/91.5	50/92.4	98/85.1
3D	51/96.5	51/96.5	84/94.3	53/96.4	52/96.5	27/98.2	57/96.1	64/95.6	113/92.3	114/92.2	209/85.8
3’NTR	1/98.4	1/98.4	1/98.4	1/98.4	1/98.4	1/98.4	2/96.8	10/84.4	1/98.4	7/88.9	18/71.4

Citation: Liu GD, Hu NZ, Hu YZ. Full-length genome of wild-type hepatitis A virus (DL3) isolated in China. World J Gastroenterol 2003; 9(3): 499-504
URL: https://www.wjgnet.com/1007-9327/full/v9/i3/499.htm
DOI: https://dx.doi.org/10.3748/wjg.v9.i3.499