Copyright
©The Author(s) 2021.
World J Gastroenterol. Oct 7, 2021; 27(37): 6161-6179
Published online Oct 7, 2021. doi: 10.3748/wjg.v27.i37.6161
Published online Oct 7, 2021. doi: 10.3748/wjg.v27.i37.6161
Ref. | Sequencing method | Overgrown microbes | Depleted microbes | Model |
Michail et al[97] (2015) | Ion torrent | ↑Actinobacteria | ↓Erysipelotrichia | Human |
↑Prevotella | ↓Alphaproteobacteria | |||
↑Clostridia | ↓Verrucomicrobia | |||
↑Fusobacteria | ||||
↑Epsilonproteobacteria | ||||
↑Gammaproteobacteria | ||||
Wang et al[91] (2016) | Pyrosequencing | ↑Bacteroidaceae | ↓Lachnospiraceae | Human |
↑Prevotellaceae | ↓Ruminococcaceae | |||
↓Lactobacillaceae | ||||
Raman et al[95] (2013) | Pyrosequencing | ↑Alphaproteobacteria | ↓Ruminococcaceae | Human |
↑Lactobacillaceae | ↓Oscillibacter | |||
↑Lachnospiraceae | ↓Porphyromonadaceae | |||
↑Veillonellaceae | ||||
Chierico et al[94] (2017) | Pyrosequencing | ↑Actinobacteria | ↓Bacteroidetes | Human |
↑Bradyrhizobium | ↓Oscillospira | |||
↑Anaerococcus | ↓Rikenellaceae | |||
↑Peptoniphilus | ||||
↑Propionibacterium acnes | ||||
↑Dorea | ||||
↑Ruminococcus | ||||
Hoyles et al[90] (2018) | Shotgun | ↑Proteobacteria | ↓Firmicutes | Human |
↑Actinobacteria | ↓Euryarchaeota | |||
↑Verrucomicrobia | ||||
Shen et al[92] (2017) | 16S rDNA | ↑Proteobacteria | ↓Bacteroidetes | Human |
↑Fusobacteria | ↓Prevotellaceae | |||
↑Lachnospiraceae | ↓Ruminococcaceae | |||
↑Enterobacteriaceae | ↓Prevotella | |||
↑Erysipelotrichaceae | ||||
↑Streptococcaceae | ||||
↑Escherichia Shigella | ||||
Zhu et al[84] (2013) | Pyrosequencing | ↑Bacteroidetes | ↓Actinobacteria | Human |
↑Proteobacteria | ↓Bifidobacteriaceae | |||
↑Alcaligenaceae | ↓Clostridiales family XI | |||
↑Campylobacteraceae | ↓Lachnospiraceae | |||
↑Enterobacteriaceae | ||||
Chierico et al[94] (2017) | Pyrosequencing | ↑Coriobacteriaceae | ↓Porphyromonadaceae | Human |
↑Bacteroidaceae | ↓Rikenellaceae | |||
Minicis et al[147] (2014) | Pyrosequencing | ↑Firmicutes | ↓Bacteroidetes | Murine |
↑Actinobacteria | ||||
Lee et al[148] (2020) | 16S rDNA | ↑Firmicutes | ↓Bacteroidetes | Murine |
↑Deferribacters | ↓Lactobacillus murinus | |||
↑Helicobacter japonicus | ||||
↑Mucispirillum schaedleri | ||||
↑Flintibacter butyricus |
- Citation: Sharma SP, Suk KT, Kim DJ. Significance of gut microbiota in alcoholic and non-alcoholic fatty liver diseases. World J Gastroenterol 2021; 27(37): 6161-6179
- URL: https://www.wjgnet.com/1007-9327/full/v27/i37/6161.htm
- DOI: https://dx.doi.org/10.3748/wjg.v27.i37.6161