Copyright
©The Author(s) 2021.
World J Gastroenterol. Oct 7, 2021; 27(37): 6161-6179
Published online Oct 7, 2021. doi: 10.3748/wjg.v27.i37.6161
Published online Oct 7, 2021. doi: 10.3748/wjg.v27.i37.6161
Ref. | Sequencing method | Overgrown microbes | Depleted microbes | Model |
Yan et al[63] (2011) | Pyrosequencing | ↑Bacteroidales | ↓Lactococcus | Murine |
↑Bacteroides | ↓Pediococcus | |||
↑Porphyromonadaceae | ↓Lactobacillus | |||
↓Leuconostoc | ||||
Otterson et al[64] (2013) | Pyrosequencing | ↑Corynebacterium | ↓Bacteroides | Murine |
↑Alcaligenes | ↓Tannerella | |||
↑Listeria | ↓unclassified Lachnospiraceae | |||
↑Acetivibrio | ↓undefined Ruminococcaceae | |||
↑Allobaculum | ||||
Lowe et al[71] (2017) | 16S rDNA | ↑Actinobacteria | ↓Tenericutes | Murine |
↑Eubacteriaceae | ↓Verrucomicrobia | |||
↓Lachnospiraceae | ||||
↓Moraxellaceae | ||||
↓Akkermansia | ||||
Grander et al[73] (2018) | Illumina MiSeq | ↑Olsenella | ↓Acinetobacter | Murine |
↑Eubacterium | ↓Anaerotruncus | |||
↑Acetivibrio | ↓Akkermansia | |||
↓Blautia | ||||
Kakiyama et al[74] (2013) | Pyrosequencing | ↑Enterobacteriaceae | ↓Blautia | Human |
↑Veillonellaceae | ↓Ruminococcaceae | |||
↓Lachnospiraceae | ||||
↓Rikenellaceae | ||||
Bajaj et al[75] (2014) | Pyrosequencing | ↑Enterococcaeae | ↓Clostridiales XIV | Human |
↑Staphylococcaceae | ↓Ruminococcaceae | |||
↑Enterobacteriaceae | ↓Lachnospiraceae | |||
Yang et al[83] (2017) | Illumina MiSeq | ↑Candida spp. | ↓Epicoccum | Human |
↑Candida albicans | ↓Unclassified fungi | |||
↑Candida dubliniensis | ↓Galactomyces | |||
↓Debaryomyces | ||||
Ferrere et al[144] (2017) | Illumina MiSeq | ↑Actinobacteria | ↓Bacteroidetes | Murine |
↑Firmicutes | ↓Proteobacteria | |||
↑Coriobacteriaceae | ||||
↑Odoribacteriacea | ||||
↑Clostridiaceae | ||||
↑Dorea | ||||
Wang et al[145] (2019) | Illumina MiSeq | ↑Verrucomicrobia | ↓Bacteroidetes | Monkey |
↑Proteobacteria | ↓Cytophagales | |||
↑Optitutus | ↓Flavobacteriales | |||
↑Botrytis | ↓Sphingobacteriales | |||
↑Sporothrix | ↓Lactobacillales | |||
↓Nitrosomonadales | ||||
↓Opitutales | ||||
↓Helotiales | ||||
↓Ophiostomatales | ||||
Zhong et al[146] (2021) | Illumina MiSeq | ↑Proteobacteria | ↓Ruminococcaceae | Human |
↑Fusobacteria | ↓Faecalibacterium | |||
↑Fusobacteriaceae | ↓Lachnospira | |||
↑Enterobacteriaceae | ↓Agathobacter | |||
↑Burkholderiaceae | ↓Ruminococcus | |||
↑Fusobacterium | ||||
↑Escherichia-Shigella |
- Citation: Sharma SP, Suk KT, Kim DJ. Significance of gut microbiota in alcoholic and non-alcoholic fatty liver diseases. World J Gastroenterol 2021; 27(37): 6161-6179
- URL: https://www.wjgnet.com/1007-9327/full/v27/i37/6161.htm
- DOI: https://dx.doi.org/10.3748/wjg.v27.i37.6161