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©The Author(s) 2021.
World J Gastroenterol. Jun 28, 2021; 27(24): 3595-3608
Published online Jun 28, 2021. doi: 10.3748/wjg.v27.i24.3595
Published online Jun 28, 2021. doi: 10.3748/wjg.v27.i24.3595
Table 6 Analysis of gene resistance in CARD
| Gene ID | Subject ID | Align length | Mismatch | Gap | Gene start | Gene end | Subject start | Subject end | E value |
| GL000175 | YP_208874.1 | 97 | 39 | 0 | 2 | 98 | 4 | 100 | 6.00E-40 |
| GL000286 | YP_006374661.1 | 398 | 88 | 2 | 1 | 397 | 29 | 421 | 0 |
| GL000295 | NP_312937.1 | 1389 | 658 | 21 | 8 | 1371 | 8 | 1339 | 0 |
| GL000296 | AAK44936.1 | 124 | 35 | 0 | 1 | 124 | 1 | 124 | 4.00E-63 |
| GL000306 | NP_207975.1 | 459 | 16 | 0 | 1 | 459 | 1 | 459 | 0 |
| GL000309 | NP_207972.1 | 443 | 10 | 0 | 1 | 443 | 1 | 443 | 0 |
| GL000772 | AIL15701 | 421 | 220 | 3 | 1 | 420 | 1 | 417 | 4.00E-126 |
| GL000822 | YP_002344422.1 | 853 | 293 | 6 | 3 | 818 | 2 | 851 | 0 |
| GL000911 | NP_415611.1 | 247 | 130 | 2 | 1 | 247 | 1 | 243 | 2.00E-66 |
| GL000972 | WP_005768149.1 | 810 | 390 | 18 | 3 | 773 | 12 | 809 | 0 |
| GL001063 | AJF83452.1 | 287 | 164 | 2 | 1 | 283 | 2 | 288 | 1.00E-71 |
| GL001265 | NP_415804.1 | 262 | 141 | 1 | 1 | 261 | 1 | 262 | 2.00E-80 |
| GL001295 | YP_001332362.1 | 222 | 123 | 4 | 1 | 221 | 1 | 216 | 7.00E-51 |
| GL001455 | AJF82049.1 | 254 | 141 | 2 | 4 | 255 | 7 | 260 | 2.00E-62 |
- Citation: Li XH, Huang YY, Lu LM, Zhao LJ, Luo XK, Li RJ, Dai YY, Qin C, Huang YQ, Chen H. Early genetic diagnosis of clarithromycin resistance in Helicobacter pylori. World J Gastroenterol 2021; 27(24): 3595-3608
- URL: https://www.wjgnet.com/1007-9327/full/v27/i24/3595.htm
- DOI: https://dx.doi.org/10.3748/wjg.v27.i24.3595