Parallel mRNA, proteomics and miRNA expression analysis in cell line models of the intestine

doi:10.3748/wjg.v23.i41.7369

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Nov 7, 2017; 23(41): 7369-7386
Published online Nov 7, 2017. doi: 10.3748/wjg.v23.i41.7369

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Figure 3 Summary of TargetScan predicted miRNA targets. A: TargetScan prediction analysis for post-transcriptionally downregulated (green) proteins and anti-correlated/upregulated (red) miRNAs; B: TargetScan prediction analysis for post-transcriptionally upregulated (red) proteins and anti-correlated/downregulated (green) miRNAs. The prioritisation of these targets was possible only through integration of the miRNA, protein and mRNA datasets.

Citation: O’Sullivan F, Keenan J, Aherne S, O’Neill F, Clarke C, Henry M, Meleady P, Breen L, Barron N, Clynes M, Horgan K, Doolan P, Murphy R. Parallel mRNA, proteomics and miRNA expression analysis in cell line models of the intestine. World J Gastroenterol 2017; 23(41): 7369-7386
URL: https://www.wjgnet.com/1007-9327/full/v23/i41/7369.htm
DOI: https://dx.doi.org/10.3748/wjg.v23.i41.7369