Basic Study
Copyright ©The Author(s) 2016.
World J Gastroenterol. Nov 14, 2016; 22(42): 9346-9355
Published online Nov 14, 2016. doi: 10.3748/wjg.v22.i42.9346
Table 2 Restriction fragment length polymorphism conditions
Polymorphic siteRestriction enzymeIncubation temperature and durationGenotype and restriction fragment pattern (bp)
(units used)
TLR4 (Asp299gly)NcoI37 °C for 16 hAA: 249
AG: 249, 223, 26
GG: 223, 26
TLR4 (Thr399Ile)HinfI37 °C for 8 hCC: 406
CT: 406, 377, 29
TT: 377, 29
TLR2 (Arg753Gln)AciI37 °C for 16 hGG: 252 and 37
GA: 252, 37, 289
AA:289
CD14 (-550C/T)HaeIII37 °C for 12 hCC: 23, 236, 109
CT: 23, 236, 109, 259
TT: 109, 259
CD14 (-159C/T)HaeIII37 °C for 16 hCC: 141, 154
CT: 141, 154, 296
TT: 296