Copyright
©The Author(s) 2016.
World J Gastroenterol. Nov 14, 2016; 22(42): 9346-9355
Published online Nov 14, 2016. doi: 10.3748/wjg.v22.i42.9346
Published online Nov 14, 2016. doi: 10.3748/wjg.v22.i42.9346
Polymorphism site | Primer sequence (5'-3') | PCR conditions | Product size (bp) |
TLR4 (Asp299gly) | (1) 95 °C for 10 min | 249 | |
(2) 35 cycles of : | |||
F: GATTAGCATACTTAGACTACTACCTCCATG | 94 °C for 1 min | ||
R: GATCAACTTCTGAAAAAGCATTCCCAC | 61.5 °C for 1 min | ||
72 °C for 1 min | |||
(3) 72 °C for 7 min | |||
TLR4 (Thr399Ile) | (1) 95 °C for 10 min | 406 | |
(2) 35 cycles of : | |||
F: GGTTGCTGTTCTCAAAGTGATTTTGGGAGAA | 94 °C for 1 min | ||
R: CCTGAAGACTGGAGAGTGAGTTAAATGCT | 64.8 °C for 1 min | ||
72 °C for 1 min | |||
(3) 72 °C for 10 min | |||
TLR2 (Arg753Gln) | (1) 95 °C for 10 min | 289 | |
(2) 35 cycles of : | |||
F: 5’-CCTTCAAGTTGTGTCTTCATAAG-3’ | 94 °C for 1 min | ||
R: 5’-GGCCACTCCAGGTAGGTCTT-3’ | 58.6 °C for 1 min | ||
72 °C for 1 min | |||
(3) 72 °C for 10 min | |||
CD14 (-550C/T) | (1) 95 °C for 10 min | 368 | |
(2) 32 cycles of : | |||
F: GGAAGGGGGAATTTTTCTTTAGGC | 94 °C for 1 min | ||
R: -GGCAGTGTCCTGATGACTCA | 59.8 °C for 1 min | ||
72 °C for 1 min | |||
(3) 72 °C for 7 min | |||
CD14 (-159C/T) | (1) 95 °C for 10 min | 296 | |
(2) 35 cycles of : | |||
F: ATCATCCTTTTCCCACACC | 94 °C for 40 s | ||
R: AACTCTTCGGCTGCCTCT | 61 °C for 40 s | ||
72 °C for 40 s | |||
(3) 72 °C for 10 min |
- Citation: Kapil S, Duseja A, Sharma BK, Singla B, Chakraborti A, Das A, Ray P, Dhiman RK, Chawla Y. Genetic polymorphism in CD14 gene, a co-receptor of TLR4 associated with non-alcoholic fatty liver disease. World J Gastroenterol 2016; 22(42): 9346-9355
- URL: https://www.wjgnet.com/1007-9327/full/v22/i42/9346.htm
- DOI: https://dx.doi.org/10.3748/wjg.v22.i42.9346