Reciprocal impact of host factors and Helicobacter pylori genotypes on gastric diseases

doi:10.3748/wjg.v21.i31.9317

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Aug 21, 2015; 21(31): 9317-9327
Published online Aug 21, 2015. doi: 10.3748/wjg.v21.i31.9317

Table 1 Oligonucleotide primers used for polymerase chain reaction

Gene	Primer	Sequence (5'→3')	PCR products (bp)	Annealing temperature (°C)	Ref.
16S rRNA	HP1	GCAATCAGCGTCAGTAATGTT C	519	58.5	[85]
16S rRNA	HP2	GCTAAGAGATCAGCCTATGTCC	519	58.5	[85]
vacA (s1, s2)	VA1F	ATGGAAATACAAGAAACACACC	s1: 259	56.0	[25]
vacA (s1, s2)	VA1R	CTGCTTGAATGCGCCAAACTTTAATC	s2: 286	56.0	[25]
vacA (m1, m2)	VAG-F	CAATCTGTCCAATCAAGCGAG	m1: 570	58.5	[25]
vacA (m1, m2)	VAG-R	GCGTCAAAATAATTCCAAGG	m2: 645	58.5	[25]
cagA	D008	ATAATGCTAAATTAGACAACTTGAGCGA	298	58.5	[86]
cagA	R008	TTAGAATAATCAACAAACATCACGCCAT	298	58.5	[86]

PCR: Polymerase chain reaction.

Citation: Honarmand-Jahromy S, Siavoshi F, Malekzadeh R, Nejad Sattari T, Latifi-Navid S. Reciprocal impact of host factors and Helicobacter pylori genotypes on gastric diseases. World J Gastroenterol 2015; 21(31): 9317-9327
URL: https://www.wjgnet.com/1007-9327/full/v21/i31/9317.htm
DOI: https://dx.doi.org/10.3748/wjg.v21.i31.9317