Copyright
©The Author(s) 2015.
World J Gastroenterol. Jun 14, 2015; 21(22): 6898-6904
Published online Jun 14, 2015. doi: 10.3748/wjg.v21.i22.6898
Published online Jun 14, 2015. doi: 10.3748/wjg.v21.i22.6898
SNP | Gene(s) | Locus | Alleles (A1/B) | Major allelic frequency | HWE P value | OR | 95%CI | P value | |
Case | Control | ||||||||
rs1912453 | C1orf110 | 1q23.3 | C/T | 0.404 | 0.392 | 0.812 | 1.054 | 0.846-1.314 | 0.639 |
rs10911251 | LAMC1 | 1q25.3 | C/A | 0.487 | 0.494 | 0.256 | 0.976 | 0.787-1.211 | 0.826 |
rs6687758 | 1q41 | G/A | 0.243 | 0.222 | 0.191 | 1.127 | 0.873-1.455 | 0.358 | |
rs11903757 | 2q32.3 | C/T | 0.039 | 0.044 | 1.000 | 0.889 | 0.518-1.525 | 0.668 | |
rs10936599 | ARPM1 | 3q26.2 | C/T | 0.480 | 0.453 | 0.909 | 1.116 | 0.899-1.384 | 0.320 |
rs13130787 | 4q22.2 | C/T | 0.307 | 0.315 | 0.239 | 0.965 | 0.765-1.217 | 0.765 | |
rs367615 | 5q21.3 | T/C | 0.447 | 0.431 | 0.908 | 1.070 | 0.861-1.328 | 0.542 | |
rs647161 | 5q31.1 | A/C | 0.296 | 0.274 | 0.198 | 1.113 | 0.877-1.413 | 0.377 | |
rs1321311 | 6p21.2 | T/G | 0.200 | 0.140 | 0.234 | 1.534 | 1.145-2.055 | 0.004 | |
rs2057314 | DCBLD1 | 6q22.1 | C/T | 0.483 | 0.455 | 0.302 | 1.120 | 0.901-1.391 | 0.308 |
rs9365723 | SYNJ2 | 6q25.3 | G/A | 0.411 | 0.373 | 0.224 | 1.169 | 0.935-1.462 | 0.171 |
rs7758229 | SLC22A3 | 6q25.3 | T/G | 0.229 | 0.268 | 1.000 | 0.811 | 0.632-1.042 | 0.101 |
rs39453 | 7p15.3 | C/T | 0.304 | 0.339 | 0.528 | 0.851 | 0.676-1.073 | 0.172 | |
rs10505477 | POU5F1B | 8q24.21 | T/C | 0.431 | 0.435 | 0.205 | 0.983 | 0.791-1.221 | 0.874 |
rs6983267 | G/T | 0.425 | 0.437 | 0.490 | 0.950 | 0.765-1.181 | 0.645 | ||
rs7014346 | A/G | 0.288 | 0.323 | 0.438 | 0.848 | 0.672-1.071 | 0.167 | ||
rs10114408 | 9q22.32 | T/A | 0.160 | 0.177 | 0.175 | 0.881 | 0.662-1.174 | 0.388 | |
rs1665650 | HSPA12A | 10q25.3 | A/G | 0.304 | 0.306 | 0.595 | 0.991 | 0.784-1.251 | 0.937 |
rs3824999 | POLD3 | 11q13.4 | C/A | 0.370 | 0.379 | 0.542 | 0.961 | 0.768-1.202 | 0.726 |
rs3802842 | C11orf93 | 11q23.1 | C/A | 0.421 | 0.451 | 0.065 | 0.885 | 0.712-1.100 | 0.272 |
rs10774214 | CCND2 | 12p13.32 | T/C | 0.320 | 0.318 | 0.0262 | 1.011 | 0.803-1.274 | 0.923 |
rs3217901 | G/A | 0.482 | 0.498 | 0.113 | 0.936 | 0.755-1.161 | 0.548 | ||
rs59336 | TBX3 | 12q24.21 | T/A | 0.417 | 0.379 | 1.000 | 1.171 | 0.939-1.461 | 0.160 |
rs7315438 | T/C | 0.361 | 0.342 | 0.528 | 1.085 | 0.866-1.360 | 0.478 | ||
rs4444235 | BMP4 | 14q22.2 | C/T | 0.497 | 0.435 | 0.730 | 1.281 | 1.027-1.599 | 0.028 |
rs4779584 | SCG5 | 15q13.3 | C/T | 0.216 | 0.190 | 0.716 | 1.175 | 0.899-1.537 | 0.237 |
rs9929218 | CDH1 | 16q22.1 | A/G | 0.163 | 0.163 | 1.000 | 0.997 | 0.745-1.334 | 0.984 |
rs4939827 | SMAD7 | 18q21.1 | T/C | 0.204 | 0.248 | 0.227 | 0.776 | 0.600-1.004 | 0.053 |
rs961253 | 20p12.3 | A/C | 0.107 | 0.102 | 0.537 | 1.062 | 0.747-1.510 | 0.737 | |
rs2423279 | C/T | 0.359 | 0.344 | 0.0332 | 1.069 | 0.853-1.340 | 0.563 | ||
rs4925386 | LAMA5 | 20q13.33 | T/C | 0.251 | 0.253 | 0.0102 | 0.987 | 0.770-1.265 | 0.916 |
- Citation: Geng TT, Xun XJ, Li S, Feng T, Wang LP, Jin TB, Hou P. Association of colorectal cancer susceptibility variants with esophageal cancer in a Chinese population. World J Gastroenterol 2015; 21(22): 6898-6904
- URL: https://www.wjgnet.com/1007-9327/full/v21/i22/6898.htm
- DOI: https://dx.doi.org/10.3748/wjg.v21.i22.6898